Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g2027 ATGCAGAATAACGCTGTATTGGCTTTGGCTATGTCTTTTTCCCTTAATTCTATTGCTACGGCTACTGCTATTCCATGCCCAAGCCGAAGCCCTAATTTCCCTCACTTTTCCCACATTCTTCAATTTCGTTCTCAATGTTCCATCTCATGGCGTTCTTCTTCATCCATCTCTCTTTTTACTTCTCGATTTACTCCGAGGTTTCAGAAATTTGCCGTAATGGCTGCTTCTGTGCCGGAGAGTGCCGGCGAGGCTGTGGAATCCGTTGATTTCGTTCATAATCTCCGGCTTGGTGCAATGTTTGGGGTTTGGTACCTTTTGAATATCTACTACAATATTTTCAACAAACAGGTTCTGAAAGCCTTTCCCTTTCCAACTACGGTCACAGCTTTCCAGTTCGGCTGTGGTACGCTCATAGTAAACTTAATGTGGGCTGTTAATTTTCACCATAGACCCAAGATCAATCGATCCCAGTTTGCTGCCATTCTTCCGCTGGCTGTAGCGCACACACTGGGAAACATATTAACCAATGTGAGTCTTGGGAGAGTTGCGGTTTCATTCACTCACACCATCAAAGCAATGGAGCCATTTTTCACTGTCCTTCTCTCTGCTTTGTTTTTGGCTGAGAGGCCCACATTTTGGGTTGTTTTTTCTCTGGTACCCGTTGTAGGAGGAGTGGCACTTGCTTCTTTCACTGAAGCCTCATTTAATTGGATTGGCTTCGGCAGTGCCATGGCTTCCAATCTTACCAATCAATCACGTAATATCTTCAGCAAAAAGTTCATGGTCCACAAAGAGGCATTGGACAATATCAATCTCTTCTCTGTACTTACTATCATTTCGTTTATCCTGTTGGTTCCCTCGGCCCTTCTCCTTGAAGGCAGTAAACTTAGTCCTTCATACCTGCAATTAGCGGCAAATCAAGGGTTGAATATTAGGGAGCTATGCATTAGGTTGCTTCTATCTGGCATCTGTTTCCATAGTTATCAGCAGATTTCTTATTCAATACTACAGGAAATTTCACCAGTGAGCCATGCAGTAGGAAATTCTTTGAAGCGTGTGGTGGTTATAGTGTCCTCCGTTATTTTCTTCCAAACAGCAGTTTCACCTCTAAACGCCCTAGGAACTGGCATAGCTCTTGTGGGAGTTTTCTTGTATTCAAGGGCAAAGCGTATGAAGCCAAAGGTTAAGTCTTTGTAA 1197 43.53 MQNNAVLALAMSFSLNSIATATAIPCPSRSPNFPHFSHILQFRSQCSISWRSSSSISLFTSRFTPRFQKFAVMAASVPESAGEAVESVDFVHNLRLGAMFGVWYLLNIYYNIFNKQVLKAFPFPTTVTAFQFGCGTLIVNLMWAVNFHHRPKINRSQFAAILPLAVAHTLGNILTNVSLGRVAVSFTHTIKAMEPFFTVLLSALFLAERPTFWVVFSLVPVVGGVALASFTEASFNWIGFGSAMASNLTNQSRNIFSKKFMVHKEALDNINLFSVLTIISFILLVPSALLLEGSKLSPSYLQLAANQGLNIRELCIRLLLSGICFHSYQQISYSILQEISPVSHAVGNSLKRVVVIVSSVIFFQTAVSPLNALGTGIALVGVFLYSRAKRMKPKVKSL 398
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 37301289 37309154 - CePI673135_09g020270.1 Cec09g2027 212537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g2027 398 PANTHER SOLUTE CARRIER FAMILY 35 89 389 IPR050186 GO:0005794(PANTHER)|GO:0015297(PANTHER)
Cec09g2027 398 SUPERFAMILY Multidrug resistance efflux transporter EmrE 142 231 - -
Cec09g2027 398 Pfam Triose-phosphate Transporter family 94 386 IPR004853 -
Cec09g2027 398 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 94 395 IPR004696 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Cec09g2027 398 SUPERFAMILY Multidrug resistance efflux transporter EmrE 311 391 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec09g2027 Cec-Chr9:37301289 Cec10g0534 Cec-Chr10:6427648 9.50E-59 dispersed
Cec01g1460 Cec-Chr1:29244422 Cec09g2027 Cec-Chr9:37301289 5.80E-116 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g2027 K15283 - csv:101217436 667.151