Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g2038 ATGGCTTCTTCAAGCTTCTCAAACTCACCATGTGCAGCATGCAAATTCCTAAGAAGAAAATGCTTAGCCGATTGCATATTTGCGCCCTACTTTCCTCCTGAAGAGCCAACCAAATTTGCCAATGTTCACAAGATCTTTGGAGCCAGCAATGTGAGCAAGCTTCTCAATGAGGTCCAGCCCCATCAGCGCGAGGACGCCGTAAATTCTCTAGCCTACGAGGCCGAGGCTCGTATGAAAGACCCCGTCTACGGTTGTGTCGGGGCCATCTCCGTTCTACAAAGACAAGTCATTCGCTTGCAGAAAGAGCTTGATGCTACAAATGCTGATTTAGTACGATATGCAAGCGGGGGCGCTCGCCCGCCCTCGCAATTTGGAAGAAGGGCAGCAACTGCCTCGATGACTCGCCATCATTCTGACCTGTCTTTTCTTTCTCCCTTGAGTATTAACGATCATGATGATCCTTATTGCCATGATAAAGAGGAAGACAATTGA 492 48.37 MASSSFSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGGARPPSQFGRRAATASMTRHHSDLSFLSPLSINDHDDPYCHDKEEDN 163
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 37418146 37418637 - CePI673135_09g020380.1 Cec09g2038 212548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g2038 163 Coils Coil 89 109 - -
Cec09g2038 163 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Cec09g2038 163 Pfam Lateral organ boundaries (LOB) domain 10 107 IPR004883 -
Cec09g2038 163 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 8 116 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec09g2038 Cec-Chr9:37418146 Cec11g1157 Cec-Chr11:23600517 4.60E-44 dispersed
Cec08g1765 Cec-Chr8:28768122 Cec09g2038 Cec-Chr9:37418146 4.20E-17 transposed
Cec01g1438 Cec-Chr1:29030843 Cec09g2038 Cec-Chr9:37418146 4.20E-45 wgd
Cec10g1403 Cec-Chr10:28374804 Cec09g2038 Cec-Chr9:37418146 2.30E-58 wgd
Cec06g1923 Cec-Chr6:32617791 Cec09g2038 Cec-Chr9:37418146 1.80E-52 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30277 PF03195 LOB 9.30E-42 No_clan Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g2038 - - - 0.0