Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g2044 ATGGGGTCCGGTAATGGGTTATCTTCAAAAGAGTTTGATTTGGATGCTAAGTGGCTGGTCGATCCGAAGCAAATCTTTGTTGGGCCAAGGATTGGGGAGGGCGCGCATGGCAAAGTGCACAAGGGGAAATATAAAGACCAAAATGTTGCAATTAAAATAATTCGGAAAGGTGAAACCCCAGAAGATATTGCGAAAACTGAGGCACGCTTTGCTCGGGAGGTTGCTATGTTATCCAAAGTTCAACACAAGAATCTTGCGAAGTTTATAGGTGCTTGCAAGGAGCCTATTATGGTGATAGTGACTGAGCTTCTTTTAGGCGGTACATTAAGGAAGTACCTGTTGAGTATAAGGCCAAGGTGCTTGGACTTCAATGAGGCAGTTGGCTTTGCACTTGATATTGCACGTGCAATGGAATGCTTGCACTCGCATGGCATCATTCACCGTGACCTCAAGCCTGAGAATTTGATCTTGACTGCAGACCACAAAACCGTTAAACTTGCTGATTTTGGTCTTGCTAGAGAAGAGTCGGTAACAGAGATGATGACGGCTGAAACTGGGACTTACAGATGGATGGCTCCAGAGCTATACAGTACAGTAACTTTACGAAATGGAGAGAAGAAGCATTACAATCACAAGGTGGATGTTTACAGCTTTGGAATTGTATTCTGGGAGATTATCCAAAATAAGTTGCCTTTCGAAGGCATGTCAAATCTACAAGCAGCATATGCAGCTGCTTTTAAGAATTTACGACCGACTGCTGAGAACCTCCCACCGGATTTAGCACCGATTGTGACTTCCTGTTGGACAGAGGACCCAAACGATCGGCCTAACTTCAACCAAATCATACAAATGCTCTTGAAATGTCTATCCACCGTTCCACAACCAGAGTATGTTGCACCACCACCATTGATGCACCCGCCTGAGAATGCAGTTTTGCCACCAGAGTCTCCTGGAACAATTTCTTTGATGGCAGCCACAAGACGTGGCACGAGGGAAGTCCTGAATGGCGAGATGGAAGAGAAACCGAGTAGTTTCTTCTCGTGTTTCACTGCCGAGCAGTGGCTTTTAGCTTGGGCAGCAAGTATCCATCTTCGTCTTCCGTACCTCGGCCTCGGTCCTAGCTTCCGTCAACGCTGGGGCCCATATCCATTAACAACCATCTCCATGCTTCCCACTTCGCTCTGTTCCCGAGCCTATGGTCTGGCACACGAGCCTCCACCGAACCAGGGGCTCAGTTTTCCCGCTCACACTAGGCACACTCAGCTCTTGAAGAATATGGCAAGGTCTTGGATAATCGATAGCCGAACAATTGCAAGAAAAGTCAGGAACATCAGTCAATCTTCTTCACAAGTAATTAAAGATTGTGATGCGAAACGAGAATGTCCAAACTGTCACTTTATTATTGATAATACAGATGTTTCTCCTGAATGGCCTGGATTGCCTGCCGGAGTAAAGTTTGATCCAACTGATGAAGAAATAATGGAGCACTTAGCAGCCAAGTGCACTGTTGGAAACTTAAAGCCACATGCATTAATTGATGAATTCATTCCCACACTTGAAACAGACCAAGGAATCTGTTACACGCATCCAGAAAATCTCCCCGGTGTTAGTAAAGATGGAAATGATGTCCATTTCTTCCATAAAACAAGCAATGCATATTCCACGGGTCAAAGGAAGCGTCGCAAGATTGAAAGTGAACATAATTCAAGCCTTGAACATTTTCGCTGGCACAAGACAGGTAAGACCAAGGCTGTGATAGAAAATGGTGTTCATAAGGGATGGAAGAAGATCTTCTCTCTGTATAGAAGTTCGAAGGGAGGCTCGAAGCCCCAAAAGTCTAATTGGGTGATACATCAATATCATTTCGGAACTGAAGAAGATGAGAAGGAAGGTGAATACGTTTTATCAAAGATTTCTTATCAGCAGCCAAAGCAATGTATTAAGAGTAGTGATAATATGCTCATTGAGGATTTTGATGCTATGCTGCATCAAACAAGTCCAAGAACTCCCAAGTCGAATCCTCCGATTCCACCTCGATCAGGAAAATCACTTGTCTCCAATGCTGTTGCTGACAACAATCTGCCTCAGTCATTTGCAAAGGAAGAAGAGTCAACTCCGGAGGCATCTCCTGTTTCTTATCCAAATATTTCATCAGAGAACGACACAGGATACCATGATTGGTTGGCCGGAGAATCTCAGGATATAGATGATGTTGGATTACATTACTTGGAAGACAACTTATTGTGCAATGAAGTCCTAGATTCTAGTGCTTTTATAAGTAACAACCAAGTAAATCAAATGCCTTTCCCTCTCTCTGGTAGCAACGCTTACCACGAGATTGCAAACGACAACGTTCCATGTGGAATTGCAGACCTTGTGAACCTTGAACTAGATACTCCACCTGATTTTCATCTGGCTACTCTTATTATTGCTTGCAGGACCTGCAGTTTGGTTCTCAAGAGAGCATTTTCGACTGGATCGATAGGATATGAACTGAATGTTGAAGCAAATTCTAATGAGAATGACATGTTACAATCTGACTTTTCTGCCCCCGAATCTTCCTTGAATTCACCATCTTTCATCGTAAAACTCATTGCAATCATTTGGCTTTCATTTGTATGGGGAATGCCATGCATGTCGCCTGTTGGAAGTCGGTTAAACTTCAAAATTCGAATGACATGTAACAACTTACGAACATATCTATCAGTTGTTTCTCACGGTCAAGTCATCGAATCAAGAACAACCGCAACGGATCCAGTGATGAAGCTAGTTTTTGCTTAA 2781 43.55 MGSGNGLSSKEFDLDAKWLVDPKQIFVGPRIGEGAHGKVHKGKYKDQNVAIKIIRKGETPEDIAKTEARFAREVAMLSKVQHKNLAKFIGACKEPIMVIVTELLLGGTLRKYLLSIRPRCLDFNEAVGFALDIARAMECLHSHGIIHRDLKPENLILTADHKTVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLRNGEKKHYNHKVDVYSFGIVFWEIIQNKLPFEGMSNLQAAYAAAFKNLRPTAENLPPDLAPIVTSCWTEDPNDRPNFNQIIQMLLKCLSTVPQPEYVAPPPLMHPPENAVLPPESPGTISLMAATRRGTREVLNGEMEEKPSSFFSCFTAEQWLLAWAASIHLRLPYLGLGPSFRQRWGPYPLTTISMLPTSLCSRAYGLAHEPPPNQGLSFPAHTRHTQLLKNMARSWIIDSRTIARKVRNISQSSSQVIKDCDAKRECPNCHFIIDNTDVSPEWPGLPAGVKFDPTDEEIMEHLAAKCTVGNLKPHALIDEFIPTLETDQGICYTHPENLPGVSKDGNDVHFFHKTSNAYSTGQRKRRKIESEHNSSLEHFRWHKTGKTKAVIENGVHKGWKKIFSLYRSSKGGSKPQKSNWVIHQYHFGTEEDEKEGEYVLSKISYQQPKQCIKSSDNMLIEDFDAMLHQTSPRTPKSNPPIPPRSGKSLVSNAVADNNLPQSFAKEEESTPEASPVSYPNISSENDTGYHDWLAGESQDIDDVGLHYLEDNLLCNEVLDSSAFISNNQVNQMPFPLSGSNAYHEIANDNVPCGIADLVNLELDTPPDFHLATLIIACRTCSLVLKRAFSTGSIGYELNVEANSNENDMLQSDFSAPESSLNSPSFIVKLIAIIWLSFVWGMPCMSPVGSRLNFKIRMTCNNLRTYLSVVSHGQVIESRTTATDPVMKLVFA 926
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 37494793 37504804 + CePI673135_09g020440.1 Cec09g2044 212554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g2044 926 Gene3D NAC domain 489 646 IPR036093 GO:0003677(InterPro)|GO:0006355(InterPro)
Cec09g2044 926 FunFam Kinase suppressor of Ras 1 14 104 - -
Cec09g2044 926 Gene3D Transferase(Phosphotransferase) domain 1 106 297 - -
Cec09g2044 926 Pfam No apical meristem (NAM) protein 481 621 IPR003441 GO:0003677(InterPro)|GO:0006355(InterPro)
Cec09g2044 926 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 427 808 IPR044799 GO:0000976(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(PANTHER)
Cec09g2044 926 PRINTS Tyrosine kinase catalytic domain signature 101 114 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec09g2044 926 PRINTS Tyrosine kinase catalytic domain signature 139 157 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec09g2044 926 PRINTS Tyrosine kinase catalytic domain signature 256 278 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec09g2044 926 PRINTS Tyrosine kinase catalytic domain signature 213 235 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec09g2044 926 Pfam Protein tyrosine and serine/threonine kinase 30 285 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec09g2044 926 MobiDBLite consensus disorder prediction 664 685 - -
Cec09g2044 926 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec09g2044 926 ProSitePatterns Protein kinases ATP-binding region signature. 31 56 IPR017441 GO:0005524(InterPro)
Cec09g2044 926 ProSiteProfiles Protein kinase domain profile. 25 297 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec09g2044 926 SUPERFAMILY Protein kinase-like (PK-like) 17 317 IPR011009 -
Cec09g2044 926 Gene3D Phosphorylase Kinase; domain 1 13 104 - -
Cec09g2044 926 FunFam NAC domain-containing protein 8 489 645 - -
Cec09g2044 926 SMART serkin_6 25 292 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec09g2044 926 ProSiteProfiles NAC domain profile. 480 641 IPR003441 GO:0003677(InterPro)|GO:0006355(InterPro)
Cec09g2044 926 CDD STKc_MAP3K-like 31 285 - -
Cec09g2044 926 SUPERFAMILY NAC domain 466 641 IPR036093 GO:0003677(InterPro)|GO:0006355(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec09g2044 Cec-Chr9:37494793 Cec10g1393 Cec-Chr10:28233276 1.50E-147 dispersed
Cec05g2527 Cec-Chr5:36296907 Cec09g2044 Cec-Chr9:37494793 6.90E-76 transposed
Cec06g1938 Cec-Chr6:32730833 Cec09g2044 Cec-Chr9:37494793 5.30E-146 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30278 PF07714 PK_Tyr_Ser-Thr 1.00E-57 CL0016 Cec TF
72283 PF07714 PK_Tyr_Ser-Thr 1.00E-57 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g2044 - - - 0.0