Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cec09g2054 | ATGGGCTTCCCCTTTGTTGGAGAGACTCTCAGCTTTCTCAAACCTCATCATTCTAACTCAATTGGAACCTTCCTTCAACACCATTGCTCCAGGTATGGGAAGGTTTTCAAATCTCATCTATTCGGTTGGCCGGCGATAGTGTCGTGTGATCGAGAGCTTAACGTCTTCATTCTTCAGAACGACGATAAGCTTTTCAAAGTGAGTTATCCAAAAGCCATGCATGGCATTCTCGGAACAAATTCTTTGATTATCGCCGCCGGCCACACCCACCGGAAGCTCCGAAACGTCGTCGTTAGCTTCACCAGCTGGTGCAAATCCAGACCATCTTTCCTTCACTCCCTCCATAATCTCTCTATCTCTTTAATGGACTCTTGGAGATCCCAAACTCAACTCCTTTTCTGCAAAGAACTCAAAATGTTTGCTTTAAGCGTTATGGTGAAGGACCTATTGGGCATCAAAGCAAACGAGTCCATAGGATCAAAGATATTAGAAGAGTTCGAAACGTATATGAAAGGCTTTGTTTCTTTACCTTTAAATTTGCCAGGAACTCCCTATTCTAAAGCTGTCAAGGCTAGGGGGAGACTTTCTTACATTGTGAAAGAGATGATGAGAGAGAGGAGAAGGAGGGGATTATTGGAAGGGAATGATGAGAATTTTCTACAAGTGATAATGTCAAATTGGAAGCTTAGTGATGAAGAAATTGTGAGTGTTGTTTTGGACATATTGCTTGGAGGTTATGAGACAACAGCTACCCTCATGGGATTGATTGTCTATTTTCTTGCACATTCACCTCCTAATGTACTTGCAAAATTAAAGGAAGAACATGAAGCAATAAGAATTGGAAAAAGGAATGGAGAATATCTCAATTTGGAAGATTACAAGCAAATGGATTTCACATGCAATGTGATATTCGAAGCCATGAGATGTGGGAATGTGGTGAAGTTTTTACATAGAGAAGCTCTTGCAGATGTCAAATTCAAAGATATTGTCATACCCTCTGGATGGAAAGTTCATCCAGTTTTCTCAGCAATTCATCTTGATCCAACCCTCCATCCAAATCCTCAACAATTTAATCCTTGGAGATGGACTATTCGCCGCCATCGCCTTTTGGGATTTGAGATCGTTGGTCGGAGCTCGACATCAGCCGCCACTGGTAGTCGATTGTCGCATCATCGTCGCATGCACCACGCCCGATTCCATCTTTTGCCTAGACGCACATGGAAGCTTTGGATTGCGTTGTCGGCACCTTCACCCATGACCACCACGAGTCTTTGTTTAGGCGCCGCCCCCAGTTTCATCCCCATCCCTTATTGTCCTCTTCTTCTCCGGCGAGTATCTCCGGTGACCGGTGGTAGTGTGTGCGCTGAATCCAGCCAGCGACCTGCACCGTTTAACCGCACGGACAGTGACCCTCCCGGCGGCGAATTAGATCACTTTTTTGCGGCTTACATCAGCAGCGGCATCTGGACGGCGGTGAATCACACGGTTACTCCTCCACAGTCGGTGAACCTAACCAGCAGCGACCATTGCGCCCCGGCGAACGCCTCCTCTCGACATTTGCAAGTTCAAACTCAATCTAGCACGTTCCAGCAAGATTCGACTTTTAGTAAGATGTCCAAGGAGGAGAGCTTTGAAGTTAATTTAACAACCGACTGCAGCCCAGAATCTAGTAAGAAAAGAGCAAAAAGAAGAAAAAACAAAAAGAAGCAGTTATTGATGGAAGGTGTAGATGTCATGGAAATGAAAGAGGTAGGATCCGTTCAGCTGGGGGAAAGCAACATAAACTCCGATAGTGACAAAGTGAAAAAGAAGAAAAAGAGAAAGAAGAGTACTCAACAATATGTACAGGAGAGCTCTATCAAGGATGAGGCAGGAGAATATGAAAATAGAGCAGAGACTTTTATGAAAGAGGGCAGTCCTTTCTCTAATGGTGGAAGTGAGAAAATTTTCGAAAAGAGGAAAATTGCATTGGACGATGCTGAGAATGAAAGGACTGACAGCATGGTCAGAGAAAACTCTGAAGAGAAGATTCTAGAGTCTAACAATGGAAAAGCAGATCAAAGGAATATTAAGAGGAAGAAGCGGCTCTTAAAGGAAGCAGCAAATGCAGATATGCGTGGTATTTGTTACTTGAGCCGAGTTCCTCCACACATGGATCCTTTGAGACTTCGTCAGATCCTCTCACAGTATGGGGAAATACAAAGAATTTATCTTGCACCCGAGGATGCTGCCAGTCAAGTACAACGAAAGCGTGCAGGAGGCTTTCGAGGACAGTTTTTTTCAGAAGGGTGGGTTGAATTTACGGATAAAAGAGTTGCCAAGAAGGTGGCTAATATGTTAAATGGTGAACAGATAGGAGGAAGGAAGAGGTCATCTTTCTACTATGATCTCTGGAACATCAAGTATTTGAGTAAATTCAAGTGGGATGATCTCACTGAAGAAACTGCTTACAAGCATGCCATTCGGGAGCAGAAACTGGCTTTAGAAATTTCTGCTGCCAAGAGGGAAAGGGATTTCTATCTTGCGAAAGTGGATAAATCACGTGCATTGAATTCCATTGAAGAACGGCTAAAGAAGAAGCAGAAGTTGCGAAAAGATTCAGAAATGAATTCTGCACTTGCTGATAGCCAGAAACTTCCAAAGTTGATCCGCAGCTTCCCACAAACACAACCAGTTGCACATTCTGCAGTACAAAACAAACAGAGACTATCTACAAATGTCCTGGCTGGGGTGTTTGGAAGTTCCTAG | 2748 | 43.85 | MGFPFVGETLSFLKPHHSNSIGTFLQHHCSRYGKVFKSHLFGWPAIVSCDRELNVFILQNDDKLFKVSYPKAMHGILGTNSLIIAAGHTHRKLRNVVVSFTSWCKSRPSFLHSLHNLSISLMDSWRSQTQLLFCKELKMFALSVMVKDLLGIKANESIGSKILEEFETYMKGFVSLPLNLPGTPYSKAVKARGRLSYIVKEMMRERRRRGLLEGNDENFLQVIMSNWKLSDEEIVSVVLDILLGGYETTATLMGLIVYFLAHSPPNVLAKLKEEHEAIRIGKRNGEYLNLEDYKQMDFTCNVIFEAMRCGNVVKFLHREALADVKFKDIVIPSGWKVHPVFSAIHLDPTLHPNPQQFNPWRWTIRRHRLLGFEIVGRSSTSAATGSRLSHHRRMHHARFHLLPRRTWKLWIALSAPSPMTTTSLCLGAAPSFIPIPYCPLLLRRVSPVTGGSVCAESSQRPAPFNRTDSDPPGGELDHFFAAYISSGIWTAVNHTVTPPQSVNLTSSDHCAPANASSRHLQVQTQSSTFQQDSTFSKMSKEESFEVNLTTDCSPESSKKRAKRRKNKKKQLLMEGVDVMEMKEVGSVQLGESNINSDSDKVKKKKKRKKSTQQYVQESSIKDEAGEYENRAETFMKEGSPFSNGGSEKIFEKRKIALDDAENERTDSMVRENSEEKILESNNGKADQRNIKRKKRLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKKVANMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKKKQKLRKDSEMNSALADSQKLPKLIRSFPQTQPVAHSAVQNKQRLSTNVLAGVFGSS | 915 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 37592397 | 37605392 | - | CePI673135_09g020540.1 | Cec09g2054 | 212564 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cec09g2054 | 915 | SUPERFAMILY | Cytochrome P450 | 2 | 363 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec09g2054 | 915 | MobiDBLite | consensus disorder prediction | 503 | 554 | - | - | |
| Cec09g2054 | 915 | MobiDBLite | consensus disorder prediction | 589 | 626 | - | - | |
| Cec09g2054 | 915 | Gene3D | - | 645 | 792 | IPR012677 | - | |
| Cec09g2054 | 915 | Pfam | RNA recognition motif | 710 | 789 | IPR000504 | GO:0003723(InterPro) | |
| Cec09g2054 | 915 | SUPERFAMILY | RNA-binding domain, RBD | 703 | 789 | IPR035979 | GO:0003676(InterPro) | |
| Cec09g2054 | 915 | SMART | rrm1_1 | 708 | 792 | IPR000504 | GO:0003723(InterPro) | |
| Cec09g2054 | 915 | Coils | Coil | 850 | 870 | - | - | |
| Cec09g2054 | 915 | Pfam | Cytochrome P450 | 3 | 363 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec09g2054 | 915 | MobiDBLite | consensus disorder prediction | 503 | 573 | - | - | |
| Cec09g2054 | 915 | Gene3D | Cytochrome P450 | 1 | 401 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec09g2054 | 915 | MobiDBLite | consensus disorder prediction | 661 | 692 | - | - | |
| Cec09g2054 | 915 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 707 | 789 | IPR000504 | GO:0003723(InterPro) | |
| Cec09g2054 | 915 | PRINTS | E-class P450 group I signature | 233 | 250 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec09g2054 | 915 | PRINTS | E-class P450 group I signature | 340 | 364 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec09g2054 | 915 | PRINTS | E-class P450 group I signature | 29 | 48 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec09g2054 | 915 | PANTHER | ACTIVATOR OF BASAL TRANSCRIPTION 1 | 611 | 914 | IPR039119 | GO:0000447(PANTHER)|GO:0000472(PANTHER)|GO:0000480(PANTHER)|GO:0003723(PANTHER)|GO:0005730(PANTHER)|GO:0034462(PANTHER) | |
| Cec09g2054 | 915 | CDD | RRM_ABT1_like | 707 | 804 | IPR034353 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cec09g2054 | Cec-Chr9:37592397 | Cec03g0310 | Cec-Chr3:3522663 | 2.70E-08 | dispersed | |
| Cec09g2054 | Cec-Chr9:37592397 | Cec07g1484 | Cec-Chr7:30431501 | 2.50E-54 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cec09g2054 | K12639 | - | csv:101219009 | 610.912 |