Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g2081 ATGGCAGATGCAGAGGACATTCAGCCTCTTGTGTGTGATAATGGAACAGGAATGGTTAAGGCTGGATTTGCTGGGGATGATGCTCCCCGGGCAGTCTTCCCTAGCATTGTCGGCCGTCCTCGCCACACTGGTGTGATGGTTGGCATGGGCCAAAAAGATGCTTATGTTGGCGATGAAGCTCAATCCAAGCGTGGTATTTTGACCCTGAAATACCCAATTGAGCATGGTATTGTGAGCAACTGGGATGATATGGAAAAGATATGGCATCACACCTTCTATAACGAGCTTCGTGTCGCTCCAGAGGAGCATCCTGTACTCCTAACTGAGGCTCCTCTTAACCCCAAGGCTAACCGTGAAAAGATGACCCAAATCATGTTTGAGACCTTTAACACCCCTGCCATGTATGTAGCTATTCAAGCTGTCCTCTCACTGTATGCCAGTGGTCGAACCACCGGCATTGTGTTGGACTCTGGTGATGGTGTCAGTCATACAGTCCCCATCTATGAGGGCTATGCTCTCCCACATGCCATTCTTCGACTCGACCTTGCTGGCCGTGATCTTACTGATAACTTGATGAAAATTCTCACGGAGCGTGGTTATTCATTCACTACCACAGCAGAGCGTGAAATTGTGAGGGATATGAAGGAAAAGCTTTCATATATTGCCCTTGACTATGAGCAAGAGCTTGAAACATCCAAAACCAGTTCATCAGTTGAAAAGAGCTATGAGTTGCCTGATGGACAAGTCATCACAATTGGCGCCGAGCGTTTTAGATGCCCGGAAGTTCTTTTCCAGCCATCCATGATAGGAATGGAAGCTGCAGGTATTCATGAAACCACATATAATTCCATCATGAAGTGCGATGTGGATATCAGGAAGGATCTGTATGGAAACATTGTCCTCTCTGGTGGTTCGACCATGTTTTCGGGCATTGCCGATAGAATGAACAAGGAAATCTCTGCATTGGCTCCAAGCAGCATGAAGATCAAGGTGGTGGCACCTCCAGAGAGAAAATACAGTGTCTGGATTGGTGGTTCTATCTTGGCTTCTCTGAGTACCTTCCAGCAGATGTGGATTGCAAAGGCAGAGTATGATGAATCTGGGCCATCAATTGTGCACAGGAAATGCTTCTAA 1134 47.0 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYEQELETSKTSSSVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFSGIADRMNKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 37827119 37828657 - CePI673135_09g020810.1 Cec09g2081 212591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g2081 377 CDD NBD_sugar-kinase_HSP70_actin 10 183 - -
Cec09g2081 377 PRINTS Actin signature 51 62 IPR004000 -
Cec09g2081 377 PRINTS Actin signature 238 254 IPR004000 -
Cec09g2081 377 PRINTS Actin signature 63 85 IPR004000 -
Cec09g2081 377 PRINTS Actin signature 142 161 IPR004000 -
Cec09g2081 377 PRINTS Actin signature 28 37 IPR004000 -
Cec09g2081 377 PRINTS Actin signature 117 130 IPR004000 -
Cec09g2081 377 FunFam Actin, alpha skeletal muscle 255 329 - -
Cec09g2081 377 Gene3D - 140 340 - -
Cec09g2081 377 FunFam Actin, alpha skeletal muscle 330 377 - -
Cec09g2081 377 Pfam Actin 5 377 IPR004000 -
Cec09g2081 377 ProSitePatterns Actins signature 1. 55 65 IPR004001 -
Cec09g2081 377 Gene3D Actin; Chain A, domain 4 182 273 - -
Cec09g2081 377 PANTHER ACTIN 8 369 IPR004000 GO:0005737(PANTHER)
Cec09g2081 377 FunFam Actin, muscle 182 273 - -
Cec09g2081 377 FunFam Actin, alpha skeletal muscle 3 173 - -
Cec09g2081 377 ProSitePatterns Actins and actin-related proteins signature. 106 118 IPR020902 -
Cec09g2081 377 SUPERFAMILY Actin-like ATPase domain 149 377 IPR043129 -
Cec09g2081 377 SUPERFAMILY Actin-like ATPase domain 6 155 IPR043129 -
Cec09g2081 377 SMART actin_3 7 377 IPR004000 -
Cec09g2081 377 Gene3D - 10 371 - -
Cec09g2081 377 ProSitePatterns Actins signature 2. 358 366 IPR004001 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g2846 Cec-Chr5:38693597 Cec09g2081 Cec-Chr9:37827119 4.60E-59 dispersed
Cec09g2081 Cec-Chr9:37827119 Cec10g1770 Cec-Chr10:32419855 4.00E-216 dispersed
Cec07g0364 Cec-Chr7:3589718 Cec09g2081 Cec-Chr9:37827119 4.70E-217 transposed
Cec02g2127 Cec-Chr2:38824229 Cec09g2081 Cec-Chr9:37827119 2.20E-214 wgd
Cec04g0957 Cec-Chr4:29257562 Cec09g2081 Cec-Chr9:37827119 5.20E-205 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g2081 K10355 - csv:101220611 744.577