Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g2096 ATGGTTTTCTCTTCAGTTCCTGTGTTTCTTGATCCACCCAATTGGCCTTCTCAGCAACCAACTCAGCTACAAGGAAGTGGTTGTGAGACTAATAATGCTCAACACCTTCCACCTCCGGCACCGCCAACTAGCGGTGGCGGCGGTAGTGGACCTGGCTCGATTAGACCAGGGTCAATGACGGATCGAGCTAGGTTGGCGAAGATACCACAACCGGAAGCCGGGTTAAAATGTCCTAGATGCGAATCAACAAACACAAAGTTTTGTTACTTCAACAACTACAGTCTCACTCAACCTCGCCACTTTTGCAAGACGTGCCGACGGTACTGGACGAGAGGTGGAGCGATGAGGAACGTACCGGTTGGAGGCGGGTGTCGGCGGTCGAGCAAGAGATCAAGCAAAGGAGGAAGCAATAGGTCAAAATCTCCAGGGGGTTCAAGCACTTCAACAAGCACAGTGTCATCAAATAGTTGCACAACAGACATAATTAGCCAACAACTGGGTCATCATCCTCCTCCTCCAACAACCCATTTGCCCTTTTTTTCTCAAAATTTACATCATCTTAGTGATTTTGGGAACCTTGGTTTAAACTTTGAAGCCCTTCAAATTCCTTCACTCCCATCATCAGCTGGAGGAGTTGAATCCTCAATTTTATCAAGTGGAATTATAGATCATCATCAATGGAAAATACCCTTTTTTGCAAATTTACATCAACAAAATGGGATGTATTCAAATTTCATGGCTGATCAAGATCATCATCATCAACAAGGAGCTGATTTTTCAAATTACCAGCGGTTGTCAAAGCCATTATTGGAGAGTGGATTCAATACTACTACTACTACTACAAATCATCATCAATTGGAGAATATTAATAATAATAATAATAATAGCATGAAAATCTTGGAGGAGACACAAGGGATTAACAATTTGTCAAGAAATTTTCTTGGAATTCAACCAAATGATGATCAATTCTGGAATTCTAGTACTACAACAACAACAACACCTGGGAATATTGCATGGAGTAGTGATCAAATTTCAGATCATTTCAATTCAACTTCTTCCACTACTCATCTCTTGTAA 1077 41.6 MVFSSVPVFLDPPNWPSQQPTQLQGSGCETNNAQHLPPPAPPTSGGGGSGPGSIRPGSMTDRARLAKIPQPEAGLKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGAMRNVPVGGGCRRSSKRSSKGGSNRSKSPGGSSTSTSTVSSNSCTTDIISQQLGHHPPPPTTHLPFFSQNLHHLSDFGNLGLNFEALQIPSLPSSAGGVESSILSSGIIDHHQWKIPFFANLHQQNGMYSNFMADQDHHHQQGADFSNYQRLSKPLLESGFNTTTTTTNHHQLENINNNNNNSMKILEETQGINNLSRNFLGIQPNDDQFWNSSTTTTTTPGNIAWSSDQISDHFNSTSSTTHLL 358
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 37920979 37922226 - CePI673135_09g020960.1 Cec09g2096 212606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g2096 358 ProSiteProfiles Zinc finger Dof-type profile. 75 129 IPR003851 GO:0003677(InterPro)|GO:0006355(InterPro)
Cec09g2096 358 Pfam Dof domain, zinc finger 75 129 IPR003851 GO:0003677(InterPro)|GO:0006355(InterPro)
Cec09g2096 358 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 63 277 IPR045174 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec09g2096 358 MobiDBLite consensus disorder prediction 1 59 - -
Cec09g2096 358 MobiDBLite consensus disorder prediction 134 155 - -
Cec09g2096 358 MobiDBLite consensus disorder prediction 116 155 - -
Cec09g2096 358 MobiDBLite consensus disorder prediction 11 33 - -
Cec09g2096 358 ProSitePatterns Zinc finger Dof-type signature. 77 113 IPR003851 GO:0003677(InterPro)|GO:0006355(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec09g2096 Cec-Chr9:37920979 Cec10g2109 Cec-Chr10:35744102 1.20E-41 dispersed
Cec02g2134 Cec-Chr2:38881337 Cec09g2096 Cec-Chr9:37920979 1.90E-39 wgd
Cec04g0967 Cec-Chr4:29333086 Cec09g2096 Cec-Chr9:37920979 3.20E-34 wgd
Cec07g0366 Cec-Chr7:3608955 Cec09g2096 Cec-Chr9:37920979 3.70E-45 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30280 PF02701 zf-Dof 4.50E-31 No_clan Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g2096 - - - 0.0