Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g2097 ATGGCGGGAAAAGGAGAGGGTCCGGCCATCGGTATCGATCTCGGTACCACTTACTCTTGTGTTGGAGTTTGGCAGCATGATCGTGTTGAGATTATTGCCAATGATCAAGGAAATCGGACGACGCCGTCGTATGTTGCTTTCACTGACACCGAACGACTCATTGGCGACGCTGCCAAGAACCAAGTTGCTATGAATCCTCTCAACACCGTCTTCGATGCGAAGCGGTTGATTGGAAGGAGATTCTCCGATCCCTCGGTCCAGAGCGATATGAAATTGTGGCCATTCAAGGTCATTGCCGGTCCGGGGGACAAACCTATGATTGTCGTCAATTACAAAGGCGAAGAGAAGCAATTCGCCGCTGAAGAAATCTCATCCATGGTCCTTACGAAAATGCGTGAGATAGCAGAAGCTTACCTCGGTACCTCCGTGAAGAACGCCGTCGTCACCGTTCCTGCTTACTTCAATGACTCTCAGCGTCAGGCCACCAAGGACGCCGGAGTCATTGCCGGTCTTAATGTCATGCGGATCATCAACGAGCCTACAGCTGCTGCTATTGCTTATGGACTCGACAAAAAAGCGAGCAGTGTTGGCGAGAAGAATGTTCTGATTTTTGATCTGGGTGGAGGAACATTTGATGTCTCTCTCCTCACAATTGAGGAAGGCATTTTCGAGGTGAAGGCAACTGCCGGTGACACCCATCTCGGCGGTGAGGATTTCGACAACAGATTGGTTAACCATTTTGTTCAAGAATTCAAGAGGAAGCATAAGAAAGACATCAGTGGAAATCCAAGGGCTCTCAGGAGATTGAGGACTGCTTGTGAAAGAGCCAAGAGAACCCTCTCATCCACTGCCCAAACTACAATCGAAATCGATTCTTTGTATGAAGGAATTGATTTCTACACAACCATTACTCGAGCTAGATTCGAAGAGCTCAACATGGACCTGTTTCGAAAGTGTATGGAGCCAGTTGAGAAGTGTTTGAGAGATGCAAAGATGGACAAAAGCAGCGTCCATGATGTTGTCCTTGTTGGTGGTTCTACAAGAATTCCCAAAGTGCAGCAGCTATTGCAAGATTTCTTCAATGGCAAGGAACTTTGCAAGAGTATCAATCCTGATGAAGCAGTTGCTTATGGAGCTGCTGTCCAAGCCGCCATCTTGAGTGGTGAAGGAAACGAGAAAGTGCAAGACCTTCTTCTTTTGGATGTTACTCCTCTATCACTTGGTTTGGAAACTGCAGGAGGTGTAATGACTGTTCTAATCCCAAGGAACACGACCATTCCCACCAAGAAGGAACAAGTGTTCTCTACTTATTCGGATAACCAACCTGGTGTTCTTATTCAAGTCTACGAGGGTGAAAGGACAAGAACAAAAGATAACAACTTATTGGGCAAGTTTGAACTTTCTGGCATCCCTCCTGCTCCAAGAGGTGTTCCTCAGATCACTGTCTGCTTCGACATTGACGCCAACGGTATTCTAAACGTATCTGCAGAGGATAAAACTACAGGACAGAAGAACAAGATCACCATTACCAACGACAAAGGAAGGTTGTCCAAAGAAGAGATTGAGAAATTGGTTCAGGAAGCAGAGAAATTCAAGGCTGAGGATGAAGAACACAAGAAGAAAGTTGAATCAAAGAATGCTTTAGAAAACTATGCTTACAACATGAGGAATACCATCAAAGATGAAAAGATCGGTGGTAAACTTGCCCCAGCTGACAAGAAGAAGATCGAGGATGCAGTTGAACAGGCTATTCAGTGGCTAGATAGCAACCAGCTGGCTGAGTCGGATGAGTTTGATGACAAGATGAAGGAACTTGAGTCGATTTGCAACCCCATCATAGCCAAGATGTACCAAGGCGGTGCCGACATGGGTGGTGCGGCCATGGATGATGATGCTCCTCCTTCTGGTGGCAGTGGCGCTGGTCCTAAGATCGAAGAAGTCGATTAA 1947 46.53 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPLNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGPGDKPMIVVNYKGEEKQFAAEEISSMVLTKMREIAEAYLGTSVKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKASSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVQEFKRKHKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTKDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKLVQEAEKFKAEDEEHKKKVESKNALENYAYNMRNTIKDEKIGGKLAPADKKKIEDAVEQAIQWLDSNQLAESDEFDDKMKELESICNPIIAKMYQGGADMGGAAMDDDAPPSGGSGAGPKIEEVD 648
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 37940929 37943359 + CePI673135_09g020970.1 Cec09g2097 212607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g2097 648 PANTHER HEAT SHOCK PROTEIN 70KDA 9 582 IPR013126 GO:0005524(InterPro)|GO:0005737(PANTHER)|GO:0140662(InterPro)
Cec09g2097 648 FunFam Heat shock 70 kDa protein 71 126 - -
Cec09g2097 648 FunFam Heat shock 70 kDa protein 197 260 - -
Cec09g2097 648 SUPERFAMILY Actin-like ATPase domain 198 388 IPR043129 -
Cec09g2097 648 FunFam Heat shock 70 kDa 391 545 - -
Cec09g2097 648 Gene3D - 71 126 - -
Cec09g2097 648 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 543 623 IPR029048 -
Cec09g2097 648 CDD HSPA1-2_6-8-like_NBD 9 387 - -
Cec09g2097 648 Gene3D - 192 366 - -
Cec09g2097 648 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Cec09g2097 648 FunFam Heat shock 70 kDa protein 539 648 - -
Cec09g2097 648 FunFam Heat shock protein 70 10 196 - -
Cec09g2097 648 FunFam Heat shock cognate 70 kDa protein 2 319 366 - -
Cec09g2097 648 ProSitePatterns Heat shock hsp70 proteins family signature 2. 203 216 IPR018181 -
Cec09g2097 648 Gene3D Actin; Chain A, domain 4 235 318 - -
Cec09g2097 648 SUPERFAMILY Actin-like ATPase domain 8 191 IPR043129 -
Cec09g2097 648 Gene3D - 10 384 - -
Cec09g2097 648 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 392 549 IPR029047 -
Cec09g2097 648 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 391 545 IPR029047 -
Cec09g2097 648 ProSitePatterns Heat shock hsp70 proteins family signature 3. 340 354 IPR018181 -
Cec09g2097 648 FunFam Heat shock 70 kDa 235 318 - -
Cec09g2097 648 Coils Coil 514 541 - -
Cec09g2097 648 MobiDBLite consensus disorder prediction 621 648 - -
Cec09g2097 648 Pfam Hsp70 protein 9 618 IPR013126 GO:0005524(InterPro)|GO:0140662(InterPro)
Cec09g2097 648 PRINTS 70kDa heat shock protein signature 209 219 - -
Cec09g2097 648 PRINTS 70kDa heat shock protein signature 337 353 - -
Cec09g2097 648 PRINTS 70kDa heat shock protein signature 396 415 - -
Cec09g2097 648 PRINTS 70kDa heat shock protein signature 8 21 - -
Cec09g2097 648 PRINTS 70kDa heat shock protein signature 477 493 - -
Cec09g2097 648 PRINTS 70kDa heat shock protein signature 36 48 - -
Cec09g2097 648 PRINTS 70kDa heat shock protein signature 146 166 - -
Cec09g2097 648 PRINTS 70kDa heat shock protein signature 369 389 - -
Cec09g2097 648 PRINTS 70kDa heat shock protein signature 58 66 - -
Cec09g2097 648 Gene3D - 546 619 IPR029048 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec09g2097 Cec-Chr9:37940929 Cec09g2104 Cec-Chr9:37984688 0.00E+00 proximal
Cec01g0180 Cec-Chr1:1760443 Cec09g2097 Cec-Chr9:37940929 5.90E-231 transposed
Cec05g0610 Cec-Chr5:4960530 Cec09g2097 Cec-Chr9:37940929 6.50E-77 transposed
Cec05g1613 Cec-Chr5:25045948 Cec09g2097 Cec-Chr9:37940929 3.40E-73 transposed
Cec06g1092 Cec-Chr6:20594801 Cec09g2097 Cec-Chr9:37940929 4.90E-143 transposed
Cec09g0998 Cec-Chr9:9637561 Cec09g2097 Cec-Chr9:37940929 1.60E-141 transposed
Cec10g0995 Cec-Chr10:22448473 Cec09g2097 Cec-Chr9:37940929 7.60E-157 transposed
Cec11g1172 Cec-Chr11:24025173 Cec09g2097 Cec-Chr9:37940929 0.00E+00 transposed
Cec11g1727 Cec-Chr11:31526589 Cec09g2097 Cec-Chr9:37940929 7.60E-56 transposed
Cec04g0969 Cec-Chr4:29348872 Cec09g2097 Cec-Chr9:37940929 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g2097 K03283 - csv:101211905 1229.54