Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g2117 ATGCCAATCCATAAATTTTCAATCGGATCACCTGGAGAGGCGAGCCAACCGGACGCGATCAAGGCCGCATTTGCCGAATTCTTCTCCATGATCATCTTTGTTTTCGCCGGACAAGGATCCGGATTGGCTTTTGATAAGTTAACGGACGGTGGATTTGCGACGCCGTCGGGGCTGATAGTCGCATCTCTGGCTCATGCTTTTGCGTTATTTGTGGCGGTCTCCGTCGGAGCTAATATCTCCGGCGGCCATGTAAATCCGGCAGTTACATTTGGTGCGCTTATTGGTGGAAACATATCGTTCTTTAGAAGTATAATGTATTGGTTCGCTCAATTGCTTGGTTCTGTTGTTGCGTGCTTCCTTCTTAAGTTTGCGACTGGTGGAAAGGTAACACCAGCATTTGCCTTATCATCAGGAGTTTCTGTGTGGAATGCATTTATATTTGAGGCAGTGATGACTTTTGGATTAGTATATACAGTGTATGCAACAGCAGTAGATCCAAAGAGGGAGAATTTGGGCATAATTGCCCCAATTTCTATTGGTTTCATTGTTGGTGCTAACATTTTGGTTGGTGGTGCTTTTGATGGCGCTTCCATGAACCCTGCAGTCTCCTTTGGCCCTGCTGTAGTCACCTGGTCATGGACCCATCACTGGGTCTACTGGCTTGGTCCAATGGCTGGTGCAGCCATTGCTACCATTGTCTATGACACTCTCTTTATCTCAGACTCCATGCATGATCCTCTTACTCAGTATAATGATTTCTAG 762 46.33 MPIHKFSIGSPGEASQPDAIKAAFAEFFSMIIFVFAGQGSGLAFDKLTDGGFATPSGLIVASLAHAFALFVAVSVGANISGGHVNPAVTFGALIGGNISFFRSIMYWFAQLLGSVVACFLLKFATGGKVTPAFALSSGVSVWNAFIFEAVMTFGLVYTVYATAVDPKRENLGIIAPISIGFIVGANILVGGAFDGASMNPAVSFGPAVVTWSWTHHWVYWLGPMAGAAIATIVYDTLFISDSMHDPLTQYNDF 253
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 38161239 38164022 - CePI673135_09g021170.1 Cec09g2117 212627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g2117 253 CDD MIP 21 237 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec09g2117 253 PRINTS Major intrinsic protein family signature 217 237 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec09g2117 253 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec09g2117 253 PRINTS Major intrinsic protein family signature 147 165 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec09g2117 253 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec09g2117 253 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec09g2117 253 PRINTS Major intrinsic protein family signature 180 202 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec09g2117 253 Pfam Major intrinsic protein 14 234 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec09g2117 253 SUPERFAMILY Aquaporin-like 16 241 IPR023271 -
Cec09g2117 253 Gene3D Glycerol uptake facilitator protein. 5 251 IPR023271 -
Cec09g2117 253 FunFam Probable aquaporin TIP1-1 4 252 - -
Cec09g2117 253 ProSitePatterns MIP family signature. 83 91 IPR022357 -
Cec09g2117 253 PANTHER AQUAPORIN-8 6 244 IPR034294 GO:0006833(PANTHER)|GO:0015250(PANTHER)|GO:0016020(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec09g2117 Cec-Chr9:38161239 Cec10g2002 Cec-Chr10:34803829 2.20E-85 dispersed
Cec09g2117 Cec-Chr9:38161239 Cec04g1088 Cec-Chr4:30392241 2.80E-96 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g2117 K09873 - csv:101222909 473.011