Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g2145 ATGGGGAAGAGGGGGGGCTGGTTTTCTGCTGTGAAGAAAGCATTTGCTCCTGAATCTAAGGAAAAGAAAGATCAGAAAACCAATAAATCAAAGAAAAGATGGTTTGGGAAGCCAAAGAAATTGGAGACAGTGGCATCTGCAGAGCCAGCTTCATTAGATGTGTCTGTTCTACCAATTGAAGAGGTGAAACTGGCAGATGCAGAGAATGAACAAAGCAAACATGCTTACTCTGTTGCCATTGCCACTGCAGTCGCTGCCGAGGCGGCTGTTGCAGCCGCTCAGGCTGCGGCGGAGGTCGTTCGGCTCACTACCATCCCTCGGTACTCCGGGAAATCAAAGGAAGAAATAGCAGCCATCAAGATCCAGACTGCATTCCGTGGCTATATGGCAAGGAGGGCCCTGCGGGCATTAAGAGGGTTGGTGAGGCTAAAGTCATTGATACAAGGCCAATCTGTTAAAAGACAAGCAACAACCACATTAAGATGCATGCAGACTCTTGCTCGTGTGCAGTCACAGATTCGTGCAAGAAGAATTAGAATGTCAGAGGAGAATCAGGCTCTTCAGAGGCAACTCCAACAAAAACATGAAAGAGAGCTTGAGCGATTAACTACTTCTGCAAACAATGAATGGAATGACAGTACCAAATCAAAGGAGCAAATTGAAGCCAGATTAGTTAACAGGCAAGAAGCAGCAACAAGAAGAGAAAGAGCATTGGCGTATGCTTACTCTCATCAGAATTCATGGAAAAATTCTTCAAAATCTGCAAACCCTACATTCATGGACCCGAACAATCCCCGCTGGGGATGGAGTTGGTTAGAACGATGGATGGCCGCTCGTCCATGGGAGACTAAGAGCACCGTCGATTATCACGATCGTGGCTCCGTCAAGAGCGCGATCAGCCATGCAACCTCGATCGGAGACATTGCCAAAGCTTATGCCCGTCGCGATCTCAATCTCGACATCAAGCCTTTTCCAAGGACTCCAACGAGCCAAAAAACGAGCCGAGCTCCGAGTCACCAATCACCGGCGACTCCTACGAAGGCGCATTCGTCGCTATCTGCAGGGAGAAAATTGAAGCCGGATAGTCCAAGAGGAATCGGCTGGGGCGGAGACGCTGATTCCAGAAGCGCATTGAGCGTCAAATCGGAGAGGTACCGGCGACACAGCATCGCTGGATCATCGGTGAGGGATGATGAGAGCTTCACGAGTTCGCCGTCGGTTCCAAGCTACATGGCGTCCACAGAAGCAGCCAGGGCTAGGTCCCGGTTGTCGAGTCCAATGGGAACGGAGAAGACGGCGGCGTTTCCGGAGAAGGGACCGGCGAGTATCGGCGCAAAGAAACGGTTGTCGTTCCCCGCCTCGCCGGCGAATTCGAGGAGGCACTCTGGTCCGCCGAAAATAGACGCTAGTCCGACCAAGAATGTTGCAGAGATAGATTTTACCGGCGAGAGCAGATAG 1458 50.89 MGKRGGWFSAVKKAFAPESKEKKDQKTNKSKKRWFGKPKKLETVASAEPASLDVSVLPIEEVKLADAENEQSKHAYSVAIATAVAAEAAVAAAQAAAEVVRLTTIPRYSGKSKEEIAAIKIQTAFRGYMARRALRALRGLVRLKSLIQGQSVKRQATTTLRCMQTLARVQSQIRARRIRMSEENQALQRQLQQKHERELERLTTSANNEWNDSTKSKEQIEARLVNRQEAATRRERALAYAYSHQNSWKNSSKSANPTFMDPNNPRWGWSWLERWMAARPWETKSTVDYHDRGSVKSAISHATSIGDIAKAYARRDLNLDIKPFPRTPTSQKTSRAPSHQSPATPTKAHSSLSAGRKLKPDSPRGIGWGGDADSRSALSVKSERYRRHSIAGSSVRDDESFTSSPSVPSYMASTEAARARSRLSSPMGTEKTAAFPEKGPASIGAKKRLSFPASPANSRRHSGPPKIDASPTKNVAEIDFTGESR 485
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 38401423 38404604 - CePI673135_09g021450.1 Cec09g2145 212655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g2145 485 MobiDBLite consensus disorder prediction 324 351 - -
Cec09g2145 485 PANTHER IQ-DOMAIN 5-RELATED 6 439 - -
Cec09g2145 485 MobiDBLite consensus disorder prediction 395 411 - -
Cec09g2145 485 Coils Coil 177 197 - -
Cec09g2145 485 SMART iq_5 113 135 IPR000048 GO:0005515(InterPro)
Cec09g2145 485 ProSiteProfiles IQ motif profile. 114 142 - -
Cec09g2145 485 MobiDBLite consensus disorder prediction 377 394 - -
Cec09g2145 485 MobiDBLite consensus disorder prediction 1 35 - -
Cec09g2145 485 Gene3D iswi atpase 111 149 - -
Cec09g2145 485 MobiDBLite consensus disorder prediction 320 485 - -
Cec09g2145 485 Pfam IQ calmodulin-binding motif 117 135 IPR000048 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g0038 Cec-Chr1:311322 Cec09g2145 Cec-Chr9:38401423 7.40E-26 dispersed
Cec01g0768 Cec-Chr1:8444350 Cec09g2145 Cec-Chr9:38401423 3.80E-27 dispersed
Cec02g0258 Cec-Chr2:2417605 Cec09g2145 Cec-Chr9:38401423 1.20E-13 dispersed
Cec03g1235 Cec-Chr3:27419827 Cec09g2145 Cec-Chr9:38401423 2.80E-33 dispersed
Cec05g1070 Cec-Chr5:9483585 Cec09g2145 Cec-Chr9:38401423 3.40E-23 dispersed
Cec05g1978 Cec-Chr5:31798588 Cec09g2145 Cec-Chr9:38401423 2.30E-29 dispersed
Cec06g0116 Cec-Chr6:1110601 Cec09g2145 Cec-Chr9:38401423 2.50E-24 dispersed
Cec06g0277 Cec-Chr6:3116200 Cec09g2145 Cec-Chr9:38401423 2.00E-29 dispersed
Cec06g0646 Cec-Chr6:7214491 Cec09g2145 Cec-Chr9:38401423 6.80E-16 dispersed
Cec07g1090 Cec-Chr7:26079835 Cec09g2145 Cec-Chr9:38401423 1.60E-25 dispersed
Cec07g1634 Cec-Chr7:31899388 Cec09g2145 Cec-Chr9:38401423 7.30E-22 dispersed
Cec09g0022 Cec-Chr9:231277 Cec09g2145 Cec-Chr9:38401423 6.90E-10 dispersed
Cec09g0072 Cec-Chr9:606154 Cec09g2145 Cec-Chr9:38401423 1.90E-21 dispersed
Cec09g2145 Cec-Chr9:38401423 Cec10g2056 Cec-Chr10:35270494 3.20E-77 dispersed
Cec09g2145 Cec-Chr9:38401423 Cec05g2305 Cec-Chr5:34332935 3.00E-107 transposed
Cec09g2145 Cec-Chr9:38401423 Cec04g1024 Cec-Chr4:29828467 3.00E-107 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g2145 - - - 0.0