Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec09g2157 | ATGGTTAAGCCGCAGCAGCTGGAACATCACCGCCGGCGAAAGTCACTGAGCAGCAGTGAACAGTGGCGCTCTCCTCCGGCGAACGTTACTCACAATAGGGGGCAATTATTCCTCGGCAATTCAGACCCACCACACCGGCAGGCTCCCGGCGACCCCTCTTCTTCCTCGGCAAACGGCAATATTCGGCTTCTTCGTCCACTTTGTCACTGTTTTTTCTTCTTATCGAGGATGACCAATCAGTTGAGAAGTAGTGTAAACCGAAGGCGAGACTTCACAGACAAGTATAAGTGGAAGAAGCAAAGGATAATCCAGTATGCTGAGGAGGAGATTGAATCAAAGTTTGGATTCAATCTCTTCTCTGAAGGCGACAAGAGACTTGGATGGTTGCTCACTTTTACTCCTTCATCTTGTAAGGATGAGGATACTGAAAAAGTCTACAGTTGTATTGATCTTTATTTTGTCACACAGGATGGCAGCAGTTTCAAATCGAAATATAAGTTTCGTCCTTATTTTTATGCAGCCACAAAGGATAAAATGGAAACTGATGTGGAGGATTATTTGAGACGACGTTATAAAGTTCAAATAGCTGATATTGAGATTTTAGAAAAAGAAGACCTTGATCTTACGAATCATTTGTCGGGATTGCACAAGGCATATTTAAAGCTATCCTTTGACGCTGTTCAAGAATTGATGAATGTAAAGAGTGAATTATTGCATGTTGTTGAAAGCAATAGGGAGAAGTCTGATGCTGCAGAAGCATATGATTCTATTTTATTTGGGAAAAGAGAACAGAGGTCTCAAGATTTTCTAGAATGTATTGTTGATCTTCGAGAGTACGATGTTCCTTACCACGTTCGCTTTGCTATTGATCACGATTTGCGGTGTGGACAGTGGTATGATGTCAGTGTATCAAGCACTGGTATTACTCTTGAGAAGAGAAAAGATCTCCTGCAACGTGCTGAAGTTCGGATATGTGCATTCGATATTGAGACCACAAAACTACCACTGAAATTTCCAGATGCTGAATATGACATGATAATGATGATTTCCTATATGGTTGATGGACAAGGGTACTTGATTATCAACAGAGAGTGTGTTGGAGAAGATATTGAGAATTTGGAATACACTCCAAAACCAGAATATGAAGGGTTCTTCAAAGTGAGCAATGTGAAAAATGAGTTAGAGCTTCTCAAACTTTGGTTTGCCCATATGCGAGAGCTGAAACCTGGTATCTACGTCACCTATAACGGTGACTATTTTGACTGGCCATTTCTTGAAAGCAGAACAGCATATCATGGGCTTAAAATGAGTGATGAAGTAGGATTTCAATGCGACAAGAATCAGGGAGAATGTCGTTCAAAATTTGCTTGTCATTTGGATTGCTTTGCCTGGGTAAAGCGTGATAGTTATCTTCCTCAAGGTAGCCATGGTTTGAAGGCTGTCACAAAAGCGAAACTGGGGTACGATCCTCTTGAAGTGAATCCAGAGGATATGGTGCGGTTTGCAAAGGAAAAACCTCAGATGATGGCTTCCTATTCCGTTTCAGATGCTGTTGCTACATACTACTTGTACATGACCTATGTTCATCCTTTCATTTTTTCTCTAGCAACTATCATTCCAATGTCACCCGATGAGGTTTTGCGCAAGGGAAGTGGGACGCTTTGTGAAATGCTTTTAATGGTTCAGGCTTACGAGGCTAATGTCGTGTGTCCTAACAAACATCAATCAGATCCAGAAAAGTTCCATAACAATCGGCTTCTTGAAAGTGAGACATACATAGGTGGTCATGTAGAATGTCTAGAGAGTGGTGTATTTAGATCTGACCTTCCTACCAGTTTTAGACTTGATTCATCTGCTTATGATCAATTGATAAACAATCTAGATCGAGATTTGCAGTATGCCATTCAAGTAGAAGGAAAGATGGACTTGGAATCGGTGTCAAACTATAATGATGTGAAGAATGCTATTATGGAAAAGCTTATTCGATTGCGGGATGAGCCTATGCGTGAAGAGTGCCCTCTGATCTATCACCTTGATGTAACTGCAATGTATCCTAACATCATTTTAACAAATAGGCTTCAGCCGCCATCAGTAGTAACAGATGAGGTTTGCACTGCTTGTGATTTCAACCGTCCTGGAAAAACTTGTCTACGAAAACTTAAATGGGTTTGGCGTGGAGAGGTATTCATGGCTAAAAGAAGCGACTATTATCATCTGAAGAGGCAAATTGAGTCTGAGTTTGTCGATAGTGGTAATGTTCGAGTGTCAAAACAATTTCTTGAACTTCTGAAGTTGGAGCAACAAGCAAAACTGAAAGAGCGTTTAAAGAAATACTGTCAGAAGGCTTACAAACGGGTACTTGATCCAGTCACTGAAGTTCGAGAAGCGGGGATCTGTATGAGGGAAAACTCCTTCTATATCGACACTGTTCGTAGTTTTCGAGATAGAAGATATGAATACAAAGGGCTCAATAAAGTTTGGAAAGGGAAACTATCAGAAGCTAAAGCAAGTGGAAATTCAATCAAGATCCAGGAAGCCCAAGACATGGTGGTTCTGTATGATTCTTTACAACTTGCTCATAAATGTATCCTCAACTCCTTTTATGGATATGTGATGCGAAAGGGTGCTCGTTGGTATTCAATGGAAATGGCTGGGGTTGTTACATATACTGGAGCAAAAATCATTCAGAATGCTCACCAGCTAATTAAGAAAATTGGAAAACCACTAGAGTTAGACACTGATGGTATCTGGTGTGCACTACCTGGATCATTCCCAGAGAACTTTACCTTTAAAACGAAAGACTTGAAGAAGTTGACAATTTCATATCCGTGTGTTATGCTTAATGTTGATGTGGCAAAGAACAACACAAATGATCAGTACCAAACACTTGTAGATCCTGTGAGGAAAATATATGAAACGCGAAGCGAATGCTCAATTGAATTTGAAGTCGATGGACCGTACAAGGCAATGATCCTTCCTGCCTCCAAGGAAGAAGGCATTTTGATCAAGAAGAGATATGCTGTCTTCAATGATGATGGAACCCTTGCAGAGCTGAAAGGCTTTGAGATCAAGCGTAGGGGGGAGTTAAAGCTCATCAAAGTTTTCCAGGCTGAACTTTTTGACAAGTTTCTTCATGGTTCCACCTTAGAGGAATGCTATTCAGTTGTTGCATCTGTTGCAAATCGCTGGCTTGATCTTCTAGATAGTCAAGGAAAAGATATTGCAGATAGTGAGTTGCTTGATTATATATCTGAATCTAGTACCATGAGCAAGTCTTTGGCAGACTATGGAGAGCAAAAGTCTTGTGCTGTTACCACTGCAAAACGTCTTGCTGATTTTCTTGGTGATACAATGGTAAGGGATAAAGGCCTTCGATGTCAATACATAGTTGCATGTGAACCCAAGGGAACACCTGTAAGTGAGCGTGCTGTTCCTGTTGCTATATTTGAGACTGATCAAGAGATAATGAAATTTTATGTACGCAAATGGTGCAAAATTTCATCAGAAGTTGGCATTCGATCCATCATTGACTGGTCATACTACAAACAACGCCTAAGCTCAGCCATTCAAAAAATTATAACAATTCCAGCTGCCATGCAAAAGGTTTCAAATCCTGTCCCTAGGGTGGTCCATCCTGATTGGTTACATAAGAAAGTTCGTGAGAAGGATGATAAATTTTGCCAACAGAAAATAGTCGATATGTTTGCCTCAAGCAGAGGTAAATATTCAGAAAACAAAGGTGGTGCTAGCAGCAGCAAACCTGTGATGAACAGTGAAAATTCTGATGATATAGAAGACTTTCAAAAGAAAACTAGTGCTACAAATGGCCCCAAACCAGTTGTTCGAAGTTACAATGTTACAGCCATGAAACATTCAGTTGCAAAAGATAGCCAAGTAGATTCCATGATGCAAGAAAAGTGTAAGGGTGTAGGATGCGATCCTTCTTCACCATTACATTTCAAAGACATTGATAGAAATGTGGATTACCACGGATGGCTTGAAATGAAGAAACGAAAGTGGAGGAATATTTTGGACAAGAGGAAGAAACAGAGATTGGTAGATTTGAGGACTCCACTTCCTGCTAACGGTGTTCCATGGGAGTTGAATTACGCTATGAACGATAAAGAGGCTCTTGGAATAACAGGCGTTGGTTTGTATTTTAAGAGGCATGAAAAATCTATAACACATTGTCATTGGCAGATTTTACAGCTTGTTCATAGTTCACAGAGTGGCCAATATTTTGCTTGGGCTGTTGTTGAAGGAGTTATGCTAAAGATTCCTATTACTGTTCCTAGAGTATTTTACATCAATTCTAAATTACCCATTACAGAAGGATTTGTTGGTAGGCGTGTTAACAAAACCCTTCCGCATGGAACACACATCTATAACCTGTATGAGGTTGTGACTGATGAAGGTGAATTTAGGAAACAGAGTAATAAACTTGCTGCCCTCCTTGCAGATCCAGAAGTTGAGGGCATCTATGAAAGCAAGGTATCATTGGAGTTCAAGTCCATCCTCCAGATTGGTTGTGTCTGTAAAGTTGATAAAACTGCTAAAAAACGAAACATTCAAGACGGGTGGAGTCTGGATGAACTGCAAATGAAAACTACAACAGAATGCAGTTATCTCGAAAAGCTAACCTCTTTCTTCTATGTGTATAATAGCATTTCTGAAGGAGGAGATATCTACATTACCTATTTTCCTGCCACAAAATTCATACTTCTGGTGCTTTGCAAGGTTGACTATGTTGTAAACATCAAAGAAGCTGAAGTGATTTTGCAAAAGTCAATAACAGAATACAGGAGCACAAACCGTGGACCTACTGTTGCTATAATTGATTCCCCAAATGTGCAGCTTCTGAAGTCAGTTGTGAAAGTATTAGACGATTTTCCATGCTTGAACATCCCTTATGATGCTCATCATAGTCAATATCAGTTTCTTGGTTGGCAACAAAAAGCTGCTGAGATTGGAATGCGACAGTGTGCTAATTCATCCCGATGGTTGAATAATAGAATCTCTCTTGCAAGATATGCCCATGTACCTTTGGGAAATATTGAACCTGATTGGAAAATTTTTACAGCAGATATTTTCTTTTCAAGGGCATTACATGATCAACAACAGGTCCTTTGGATATCAGATGACGGTGTTCCAGATATAGGAGGCAATAATTTCGAAGACGTTTGTTTAGTTGATGAGGTTCAACAGCCTATCCGGAATTGCTCTGGTGCATACAGAAAAATTTCTGTGGAGCTAAAGATCCATCATTTGGCTGTGAATGCTCTGCTGAAGAGCAACCAAGTGAATGAAATGGAAGAAGGTGGCTTTGATGAGGCTGAATCATATGCCCCAGCATTTCCTGTCCTGAAACAGTTGATTCAAAGATGTCTTGCAGATGTAGCTACATCTGGAAATGTTTATGCTGATGAAATTTTGTTGCATCTGTACCGTTGGATTTGCAGCCCCCAATCAAGGCTTCATGACCCAGCTCTTCATCGCTTGCTTCACAAGGCAATGCAAAAGGTGTTTGCTCTTTTGTTGGCTGCACTACGCAAATTAGGTGCCACCATTATTTTTGCAAACTTCTCAAAAGTTGTCATAGACACGGGAAAGTCTGATCTTTCTGCTGCTAAGGCATACTGTGATAGCTTGCTGAAAACACTGCAAACAAGGGACCTGTTTGAGTGGATTGAGCTGATACCAGTACAGTTCTGGCACTCCCTGTTATTTATGGATCAGTACAACTATGGTGGAATTTCAGCAAAAGATAATGAAATTACAGATGCTGAATCCCAAGTTAAAATATTGTCCAACTGGAAGATTGCTGAATATCTACCTAAGAAGATTCAGGATTGTTTTATTACGATCATTTCTCAATTTATATACATTCCATGGATATATGCAACCAAACAAGCTGTAGCAAGAGCGTCGTTGCAGCAGGCCGACACGTGTACCCCGTCTTTTGAATCACACATGACAGAACATCTCAAAGAGCAGTTGAGTTTTCACTTCAGCAACCATCTGTTTGGGATTGTTGATGATATTTTACATAAACGACCTTCTGATAGTGTCCATAAAGAAGATGCTGCATTGAAATTCATTAATTACGTCTGTGCTGCTTTGGAACTTGACCAAAATGTTCGGGATGATGTTCGGAAAATGAAGAAGAATTTACTGAAGTATATGCATGTGAAAGAGTTTGCACCAGAAGCTCAGTTTTCTTATCCATGCACTTCCTTCATCTTACCCAATGTCTTTTGCAGCTATTGCAATGATTGTAGAGATTTGGACTTGTGCCGTGATTCAGATTTACAAGCACAAGAATGGCGGTGTGGTGTGGCAGAATGTGGACAACCATATAACCAAGAATTGATTGAGAATGCTCTTATTCAAATTGTGATGCAAAGAGAGCGTGCATATCACGTGCAGGATTTGGTTTGTGGTATGTGCAAACAGGTCAAAGCTGCTCATTTGTGGGAACAATGTGCCTGTGCCGGCACATTTCATTGCAAAGAAGATGCCAAGGAGTTTTTGAGCAGCATGAGGATTCTCTTGGAGGTTGCCACTCGTCAAAAGTTTCAACTTCTTCAAGAGCTCATCTCGACTATCTTGTTAAATGATTGA | 6621 | 40.3 | MVKPQQLEHHRRRKSLSSSEQWRSPPANVTHNRGQLFLGNSDPPHRQAPGDPSSSSANGNIRLLRPLCHCFFFLSRMTNQLRSSVNRRRDFTDKYKWKKQRIIQYAEEEIESKFGFNLFSEGDKRLGWLLTFTPSSCKDEDTEKVYSCIDLYFVTQDGSSFKSKYKFRPYFYAATKDKMETDVEDYLRRRYKVQIADIEILEKEDLDLTNHLSGLHKAYLKLSFDAVQELMNVKSELLHVVESNREKSDAAEAYDSILFGKREQRSQDFLECIVDLREYDVPYHVRFAIDHDLRCGQWYDVSVSSTGITLEKRKDLLQRAEVRICAFDIETTKLPLKFPDAEYDMIMMISYMVDGQGYLIINRECVGEDIENLEYTPKPEYEGFFKVSNVKNELELLKLWFAHMRELKPGIYVTYNGDYFDWPFLESRTAYHGLKMSDEVGFQCDKNQGECRSKFACHLDCFAWVKRDSYLPQGSHGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYEANVVCPNKHQSDPEKFHNNRLLESETYIGGHVECLESGVFRSDLPTSFRLDSSAYDQLINNLDRDLQYAIQVEGKMDLESVSNYNDVKNAIMEKLIRLRDEPMREECPLIYHLDVTAMYPNIILTNRLQPPSVVTDEVCTACDFNRPGKTCLRKLKWVWRGEVFMAKRSDYYHLKRQIESEFVDSGNVRVSKQFLELLKLEQQAKLKERLKKYCQKAYKRVLDPVTEVREAGICMRENSFYIDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNAHQLIKKIGKPLELDTDGIWCALPGSFPENFTFKTKDLKKLTISYPCVMLNVDVAKNNTNDQYQTLVDPVRKIYETRSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTLEECYSVVASVANRWLDLLDSQGKDIADSELLDYISESSTMSKSLADYGEQKSCAVTTAKRLADFLGDTMVRDKGLRCQYIVACEPKGTPVSERAVPVAIFETDQEIMKFYVRKWCKISSEVGIRSIIDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLHKKVREKDDKFCQQKIVDMFASSRGKYSENKGGASSSKPVMNSENSDDIEDFQKKTSATNGPKPVVRSYNVTAMKHSVAKDSQVDSMMQEKCKGVGCDPSSPLHFKDIDRNVDYHGWLEMKKRKWRNILDKRKKQRLVDLRTPLPANGVPWELNYAMNDKEALGITGVGLYFKRHEKSITHCHWQILQLVHSSQSGQYFAWAVVEGVMLKIPITVPRVFYINSKLPITEGFVGRRVNKTLPHGTHIYNLYEVVTDEGEFRKQSNKLAALLADPEVEGIYESKVSLEFKSILQIGCVCKVDKTAKKRNIQDGWSLDELQMKTTTECSYLEKLTSFFYVYNSISEGGDIYITYFPATKFILLVLCKVDYVVNIKEAEVILQKSITEYRSTNRGPTVAIIDSPNVQLLKSVVKVLDDFPCLNIPYDAHHSQYQFLGWQQKAAEIGMRQCANSSRWLNNRISLARYAHVPLGNIEPDWKIFTADIFFSRALHDQQQVLWISDDGVPDIGGNNFEDVCLVDEVQQPIRNCSGAYRKISVELKIHHLAVNALLKSNQVNEMEEGGFDEAESYAPAFPVLKQLIQRCLADVATSGNVYADEILLHLYRWICSPQSRLHDPALHRLLHKAMQKVFALLLAALRKLGATIIFANFSKVVIDTGKSDLSAAKAYCDSLLKTLQTRDLFEWIELIPVQFWHSLLFMDQYNYGGISAKDNEITDAESQVKILSNWKIAEYLPKKIQDCFITIISQFIYIPWIYATKQAVARASLQQADTCTPSFESHMTEHLKEQLSFHFSNHLFGIVDDILHKRPSDSVHKEDAALKFINYVCAALELDQNVRDDVRKMKKNLLKYMHVKEFAPEAQFSYPCTSFILPNVFCSYCNDCRDLDLCRDSDLQAQEWRCGVAECGQPYNQELIENALIQIVMQRERAYHVQDLVCGMCKQVKAAHLWEQCACAGTFHCKEDAKEFLSSMRILLEVATRQKFQLLQELISTILLND | 2206 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 38498677 | 38522183 | - | CePI673135_09g021570.1 | Cec09g2157 | 212667 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec09g2157 | 2206 | SMART | polmehr3 | 320 | 922 | IPR006172 | GO:0000166(InterPro)|GO:0003676(InterPro)|GO:0003887(InterPro) | |
Cec09g2157 | 2206 | Pfam | DNA polymerase epsilon catalytic subunit A, thumb domain | 1025 | 1200 | - | - | |
Cec09g2157 | 2206 | Gene3D | - | 1020 | 1204 | IPR042087 | - | |
Cec09g2157 | 2206 | SMART | DUF1744_2 | 1545 | 1918 | IPR013697 | GO:0003887(InterPro)|GO:0005634(InterPro)|GO:0006260(InterPro)|GO:0008270(InterPro) | |
Cec09g2157 | 2206 | FunFam | DNA polymerase epsilon catalytic subunit | 1020 | 1204 | - | - | |
Cec09g2157 | 2206 | Pfam | Domain of unknown function (DUF1744) | 1578 | 1918 | IPR013697 | GO:0003887(InterPro)|GO:0005634(InterPro)|GO:0006260(InterPro)|GO:0008270(InterPro) | |
Cec09g2157 | 2206 | Gene3D | - | 319 | 549 | IPR036397 | GO:0003676(InterPro) | |
Cec09g2157 | 2206 | Pfam | Zinc finger domain of DNA polymerase-epsilon | 2141 | 2203 | IPR054475 | - | |
Cec09g2157 | 2206 | Pfam | DNA polymerase family B, exonuclease domain | 275 | 481 | IPR006133 | - | |
Cec09g2157 | 2206 | SUPERFAMILY | Ribonuclease H-like | 140 | 548 | IPR012337 | - | |
Cec09g2157 | 2206 | MobiDBLite | consensus disorder prediction | 1240 | 1261 | - | - | |
Cec09g2157 | 2206 | Gene3D | Palm domain of DNA polymerase | 665 | 1016 | IPR023211 | - | |
Cec09g2157 | 2206 | CDD | DNA_polB_epsilon_exo | 321 | 525 | - | - | |
Cec09g2157 | 2206 | MobiDBLite | consensus disorder prediction | 19 | 37 | - | - | |
Cec09g2157 | 2206 | FunFam | DNA polymerase epsilon catalytic subunit | 321 | 549 | - | - | |
Cec09g2157 | 2206 | MobiDBLite | consensus disorder prediction | 1 | 57 | - | - | |
Cec09g2157 | 2206 | CDD | POLBc_epsilon | 584 | 1201 | - | - | |
Cec09g2157 | 2206 | MobiDBLite | consensus disorder prediction | 1243 | 1258 | - | - | |
Cec09g2157 | 2206 | FunFam | DNA polymerase epsilon catalytic subunit | 137 | 308 | - | - | |
Cec09g2157 | 2206 | PANTHER | DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A | 86 | 2176 | IPR029703 | GO:0000278(PANTHER)|GO:0003677(InterPro)|GO:0003677(PANTHER)|GO:0003887(PANTHER)|GO:0003887(InterPro)|GO:0006260(InterPro)|GO:0006272(PANTHER)|GO:0006281(InterPro)|GO:0006287(PANTHER)|GO:0006297(PANTHER)|GO:0008310(PANTHER)|GO:0008622(PANTHER)|GO:0008622(InterPro)|GO:0045004(PANTHER) | |
Cec09g2157 | 2206 | FunFam | DNA polymerase epsilon catalytic subunit | 836 | 1016 | - | - | |
Cec09g2157 | 2206 | Gene3D | DNA Polymerase, chain B, domain 1 | 137 | 314 | - | - | |
Cec09g2157 | 2206 | SUPERFAMILY | DNA/RNA polymerases | 567 | 1194 | IPR043502 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec02g2314 | Cec-Chr2:40454015 | Cec09g2157 | Cec-Chr9:38498677 | 0.00E+00 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec09g2157 | K02324 | - | csv:101208568 | 3533.42 |