Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g2157 ATGGTTAAGCCGCAGCAGCTGGAACATCACCGCCGGCGAAAGTCACTGAGCAGCAGTGAACAGTGGCGCTCTCCTCCGGCGAACGTTACTCACAATAGGGGGCAATTATTCCTCGGCAATTCAGACCCACCACACCGGCAGGCTCCCGGCGACCCCTCTTCTTCCTCGGCAAACGGCAATATTCGGCTTCTTCGTCCACTTTGTCACTGTTTTTTCTTCTTATCGAGGATGACCAATCAGTTGAGAAGTAGTGTAAACCGAAGGCGAGACTTCACAGACAAGTATAAGTGGAAGAAGCAAAGGATAATCCAGTATGCTGAGGAGGAGATTGAATCAAAGTTTGGATTCAATCTCTTCTCTGAAGGCGACAAGAGACTTGGATGGTTGCTCACTTTTACTCCTTCATCTTGTAAGGATGAGGATACTGAAAAAGTCTACAGTTGTATTGATCTTTATTTTGTCACACAGGATGGCAGCAGTTTCAAATCGAAATATAAGTTTCGTCCTTATTTTTATGCAGCCACAAAGGATAAAATGGAAACTGATGTGGAGGATTATTTGAGACGACGTTATAAAGTTCAAATAGCTGATATTGAGATTTTAGAAAAAGAAGACCTTGATCTTACGAATCATTTGTCGGGATTGCACAAGGCATATTTAAAGCTATCCTTTGACGCTGTTCAAGAATTGATGAATGTAAAGAGTGAATTATTGCATGTTGTTGAAAGCAATAGGGAGAAGTCTGATGCTGCAGAAGCATATGATTCTATTTTATTTGGGAAAAGAGAACAGAGGTCTCAAGATTTTCTAGAATGTATTGTTGATCTTCGAGAGTACGATGTTCCTTACCACGTTCGCTTTGCTATTGATCACGATTTGCGGTGTGGACAGTGGTATGATGTCAGTGTATCAAGCACTGGTATTACTCTTGAGAAGAGAAAAGATCTCCTGCAACGTGCTGAAGTTCGGATATGTGCATTCGATATTGAGACCACAAAACTACCACTGAAATTTCCAGATGCTGAATATGACATGATAATGATGATTTCCTATATGGTTGATGGACAAGGGTACTTGATTATCAACAGAGAGTGTGTTGGAGAAGATATTGAGAATTTGGAATACACTCCAAAACCAGAATATGAAGGGTTCTTCAAAGTGAGCAATGTGAAAAATGAGTTAGAGCTTCTCAAACTTTGGTTTGCCCATATGCGAGAGCTGAAACCTGGTATCTACGTCACCTATAACGGTGACTATTTTGACTGGCCATTTCTTGAAAGCAGAACAGCATATCATGGGCTTAAAATGAGTGATGAAGTAGGATTTCAATGCGACAAGAATCAGGGAGAATGTCGTTCAAAATTTGCTTGTCATTTGGATTGCTTTGCCTGGGTAAAGCGTGATAGTTATCTTCCTCAAGGTAGCCATGGTTTGAAGGCTGTCACAAAAGCGAAACTGGGGTACGATCCTCTTGAAGTGAATCCAGAGGATATGGTGCGGTTTGCAAAGGAAAAACCTCAGATGATGGCTTCCTATTCCGTTTCAGATGCTGTTGCTACATACTACTTGTACATGACCTATGTTCATCCTTTCATTTTTTCTCTAGCAACTATCATTCCAATGTCACCCGATGAGGTTTTGCGCAAGGGAAGTGGGACGCTTTGTGAAATGCTTTTAATGGTTCAGGCTTACGAGGCTAATGTCGTGTGTCCTAACAAACATCAATCAGATCCAGAAAAGTTCCATAACAATCGGCTTCTTGAAAGTGAGACATACATAGGTGGTCATGTAGAATGTCTAGAGAGTGGTGTATTTAGATCTGACCTTCCTACCAGTTTTAGACTTGATTCATCTGCTTATGATCAATTGATAAACAATCTAGATCGAGATTTGCAGTATGCCATTCAAGTAGAAGGAAAGATGGACTTGGAATCGGTGTCAAACTATAATGATGTGAAGAATGCTATTATGGAAAAGCTTATTCGATTGCGGGATGAGCCTATGCGTGAAGAGTGCCCTCTGATCTATCACCTTGATGTAACTGCAATGTATCCTAACATCATTTTAACAAATAGGCTTCAGCCGCCATCAGTAGTAACAGATGAGGTTTGCACTGCTTGTGATTTCAACCGTCCTGGAAAAACTTGTCTACGAAAACTTAAATGGGTTTGGCGTGGAGAGGTATTCATGGCTAAAAGAAGCGACTATTATCATCTGAAGAGGCAAATTGAGTCTGAGTTTGTCGATAGTGGTAATGTTCGAGTGTCAAAACAATTTCTTGAACTTCTGAAGTTGGAGCAACAAGCAAAACTGAAAGAGCGTTTAAAGAAATACTGTCAGAAGGCTTACAAACGGGTACTTGATCCAGTCACTGAAGTTCGAGAAGCGGGGATCTGTATGAGGGAAAACTCCTTCTATATCGACACTGTTCGTAGTTTTCGAGATAGAAGATATGAATACAAAGGGCTCAATAAAGTTTGGAAAGGGAAACTATCAGAAGCTAAAGCAAGTGGAAATTCAATCAAGATCCAGGAAGCCCAAGACATGGTGGTTCTGTATGATTCTTTACAACTTGCTCATAAATGTATCCTCAACTCCTTTTATGGATATGTGATGCGAAAGGGTGCTCGTTGGTATTCAATGGAAATGGCTGGGGTTGTTACATATACTGGAGCAAAAATCATTCAGAATGCTCACCAGCTAATTAAGAAAATTGGAAAACCACTAGAGTTAGACACTGATGGTATCTGGTGTGCACTACCTGGATCATTCCCAGAGAACTTTACCTTTAAAACGAAAGACTTGAAGAAGTTGACAATTTCATATCCGTGTGTTATGCTTAATGTTGATGTGGCAAAGAACAACACAAATGATCAGTACCAAACACTTGTAGATCCTGTGAGGAAAATATATGAAACGCGAAGCGAATGCTCAATTGAATTTGAAGTCGATGGACCGTACAAGGCAATGATCCTTCCTGCCTCCAAGGAAGAAGGCATTTTGATCAAGAAGAGATATGCTGTCTTCAATGATGATGGAACCCTTGCAGAGCTGAAAGGCTTTGAGATCAAGCGTAGGGGGGAGTTAAAGCTCATCAAAGTTTTCCAGGCTGAACTTTTTGACAAGTTTCTTCATGGTTCCACCTTAGAGGAATGCTATTCAGTTGTTGCATCTGTTGCAAATCGCTGGCTTGATCTTCTAGATAGTCAAGGAAAAGATATTGCAGATAGTGAGTTGCTTGATTATATATCTGAATCTAGTACCATGAGCAAGTCTTTGGCAGACTATGGAGAGCAAAAGTCTTGTGCTGTTACCACTGCAAAACGTCTTGCTGATTTTCTTGGTGATACAATGGTAAGGGATAAAGGCCTTCGATGTCAATACATAGTTGCATGTGAACCCAAGGGAACACCTGTAAGTGAGCGTGCTGTTCCTGTTGCTATATTTGAGACTGATCAAGAGATAATGAAATTTTATGTACGCAAATGGTGCAAAATTTCATCAGAAGTTGGCATTCGATCCATCATTGACTGGTCATACTACAAACAACGCCTAAGCTCAGCCATTCAAAAAATTATAACAATTCCAGCTGCCATGCAAAAGGTTTCAAATCCTGTCCCTAGGGTGGTCCATCCTGATTGGTTACATAAGAAAGTTCGTGAGAAGGATGATAAATTTTGCCAACAGAAAATAGTCGATATGTTTGCCTCAAGCAGAGGTAAATATTCAGAAAACAAAGGTGGTGCTAGCAGCAGCAAACCTGTGATGAACAGTGAAAATTCTGATGATATAGAAGACTTTCAAAAGAAAACTAGTGCTACAAATGGCCCCAAACCAGTTGTTCGAAGTTACAATGTTACAGCCATGAAACATTCAGTTGCAAAAGATAGCCAAGTAGATTCCATGATGCAAGAAAAGTGTAAGGGTGTAGGATGCGATCCTTCTTCACCATTACATTTCAAAGACATTGATAGAAATGTGGATTACCACGGATGGCTTGAAATGAAGAAACGAAAGTGGAGGAATATTTTGGACAAGAGGAAGAAACAGAGATTGGTAGATTTGAGGACTCCACTTCCTGCTAACGGTGTTCCATGGGAGTTGAATTACGCTATGAACGATAAAGAGGCTCTTGGAATAACAGGCGTTGGTTTGTATTTTAAGAGGCATGAAAAATCTATAACACATTGTCATTGGCAGATTTTACAGCTTGTTCATAGTTCACAGAGTGGCCAATATTTTGCTTGGGCTGTTGTTGAAGGAGTTATGCTAAAGATTCCTATTACTGTTCCTAGAGTATTTTACATCAATTCTAAATTACCCATTACAGAAGGATTTGTTGGTAGGCGTGTTAACAAAACCCTTCCGCATGGAACACACATCTATAACCTGTATGAGGTTGTGACTGATGAAGGTGAATTTAGGAAACAGAGTAATAAACTTGCTGCCCTCCTTGCAGATCCAGAAGTTGAGGGCATCTATGAAAGCAAGGTATCATTGGAGTTCAAGTCCATCCTCCAGATTGGTTGTGTCTGTAAAGTTGATAAAACTGCTAAAAAACGAAACATTCAAGACGGGTGGAGTCTGGATGAACTGCAAATGAAAACTACAACAGAATGCAGTTATCTCGAAAAGCTAACCTCTTTCTTCTATGTGTATAATAGCATTTCTGAAGGAGGAGATATCTACATTACCTATTTTCCTGCCACAAAATTCATACTTCTGGTGCTTTGCAAGGTTGACTATGTTGTAAACATCAAAGAAGCTGAAGTGATTTTGCAAAAGTCAATAACAGAATACAGGAGCACAAACCGTGGACCTACTGTTGCTATAATTGATTCCCCAAATGTGCAGCTTCTGAAGTCAGTTGTGAAAGTATTAGACGATTTTCCATGCTTGAACATCCCTTATGATGCTCATCATAGTCAATATCAGTTTCTTGGTTGGCAACAAAAAGCTGCTGAGATTGGAATGCGACAGTGTGCTAATTCATCCCGATGGTTGAATAATAGAATCTCTCTTGCAAGATATGCCCATGTACCTTTGGGAAATATTGAACCTGATTGGAAAATTTTTACAGCAGATATTTTCTTTTCAAGGGCATTACATGATCAACAACAGGTCCTTTGGATATCAGATGACGGTGTTCCAGATATAGGAGGCAATAATTTCGAAGACGTTTGTTTAGTTGATGAGGTTCAACAGCCTATCCGGAATTGCTCTGGTGCATACAGAAAAATTTCTGTGGAGCTAAAGATCCATCATTTGGCTGTGAATGCTCTGCTGAAGAGCAACCAAGTGAATGAAATGGAAGAAGGTGGCTTTGATGAGGCTGAATCATATGCCCCAGCATTTCCTGTCCTGAAACAGTTGATTCAAAGATGTCTTGCAGATGTAGCTACATCTGGAAATGTTTATGCTGATGAAATTTTGTTGCATCTGTACCGTTGGATTTGCAGCCCCCAATCAAGGCTTCATGACCCAGCTCTTCATCGCTTGCTTCACAAGGCAATGCAAAAGGTGTTTGCTCTTTTGTTGGCTGCACTACGCAAATTAGGTGCCACCATTATTTTTGCAAACTTCTCAAAAGTTGTCATAGACACGGGAAAGTCTGATCTTTCTGCTGCTAAGGCATACTGTGATAGCTTGCTGAAAACACTGCAAACAAGGGACCTGTTTGAGTGGATTGAGCTGATACCAGTACAGTTCTGGCACTCCCTGTTATTTATGGATCAGTACAACTATGGTGGAATTTCAGCAAAAGATAATGAAATTACAGATGCTGAATCCCAAGTTAAAATATTGTCCAACTGGAAGATTGCTGAATATCTACCTAAGAAGATTCAGGATTGTTTTATTACGATCATTTCTCAATTTATATACATTCCATGGATATATGCAACCAAACAAGCTGTAGCAAGAGCGTCGTTGCAGCAGGCCGACACGTGTACCCCGTCTTTTGAATCACACATGACAGAACATCTCAAAGAGCAGTTGAGTTTTCACTTCAGCAACCATCTGTTTGGGATTGTTGATGATATTTTACATAAACGACCTTCTGATAGTGTCCATAAAGAAGATGCTGCATTGAAATTCATTAATTACGTCTGTGCTGCTTTGGAACTTGACCAAAATGTTCGGGATGATGTTCGGAAAATGAAGAAGAATTTACTGAAGTATATGCATGTGAAAGAGTTTGCACCAGAAGCTCAGTTTTCTTATCCATGCACTTCCTTCATCTTACCCAATGTCTTTTGCAGCTATTGCAATGATTGTAGAGATTTGGACTTGTGCCGTGATTCAGATTTACAAGCACAAGAATGGCGGTGTGGTGTGGCAGAATGTGGACAACCATATAACCAAGAATTGATTGAGAATGCTCTTATTCAAATTGTGATGCAAAGAGAGCGTGCATATCACGTGCAGGATTTGGTTTGTGGTATGTGCAAACAGGTCAAAGCTGCTCATTTGTGGGAACAATGTGCCTGTGCCGGCACATTTCATTGCAAAGAAGATGCCAAGGAGTTTTTGAGCAGCATGAGGATTCTCTTGGAGGTTGCCACTCGTCAAAAGTTTCAACTTCTTCAAGAGCTCATCTCGACTATCTTGTTAAATGATTGA 6621 40.3 MVKPQQLEHHRRRKSLSSSEQWRSPPANVTHNRGQLFLGNSDPPHRQAPGDPSSSSANGNIRLLRPLCHCFFFLSRMTNQLRSSVNRRRDFTDKYKWKKQRIIQYAEEEIESKFGFNLFSEGDKRLGWLLTFTPSSCKDEDTEKVYSCIDLYFVTQDGSSFKSKYKFRPYFYAATKDKMETDVEDYLRRRYKVQIADIEILEKEDLDLTNHLSGLHKAYLKLSFDAVQELMNVKSELLHVVESNREKSDAAEAYDSILFGKREQRSQDFLECIVDLREYDVPYHVRFAIDHDLRCGQWYDVSVSSTGITLEKRKDLLQRAEVRICAFDIETTKLPLKFPDAEYDMIMMISYMVDGQGYLIINRECVGEDIENLEYTPKPEYEGFFKVSNVKNELELLKLWFAHMRELKPGIYVTYNGDYFDWPFLESRTAYHGLKMSDEVGFQCDKNQGECRSKFACHLDCFAWVKRDSYLPQGSHGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYEANVVCPNKHQSDPEKFHNNRLLESETYIGGHVECLESGVFRSDLPTSFRLDSSAYDQLINNLDRDLQYAIQVEGKMDLESVSNYNDVKNAIMEKLIRLRDEPMREECPLIYHLDVTAMYPNIILTNRLQPPSVVTDEVCTACDFNRPGKTCLRKLKWVWRGEVFMAKRSDYYHLKRQIESEFVDSGNVRVSKQFLELLKLEQQAKLKERLKKYCQKAYKRVLDPVTEVREAGICMRENSFYIDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNAHQLIKKIGKPLELDTDGIWCALPGSFPENFTFKTKDLKKLTISYPCVMLNVDVAKNNTNDQYQTLVDPVRKIYETRSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTLEECYSVVASVANRWLDLLDSQGKDIADSELLDYISESSTMSKSLADYGEQKSCAVTTAKRLADFLGDTMVRDKGLRCQYIVACEPKGTPVSERAVPVAIFETDQEIMKFYVRKWCKISSEVGIRSIIDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLHKKVREKDDKFCQQKIVDMFASSRGKYSENKGGASSSKPVMNSENSDDIEDFQKKTSATNGPKPVVRSYNVTAMKHSVAKDSQVDSMMQEKCKGVGCDPSSPLHFKDIDRNVDYHGWLEMKKRKWRNILDKRKKQRLVDLRTPLPANGVPWELNYAMNDKEALGITGVGLYFKRHEKSITHCHWQILQLVHSSQSGQYFAWAVVEGVMLKIPITVPRVFYINSKLPITEGFVGRRVNKTLPHGTHIYNLYEVVTDEGEFRKQSNKLAALLADPEVEGIYESKVSLEFKSILQIGCVCKVDKTAKKRNIQDGWSLDELQMKTTTECSYLEKLTSFFYVYNSISEGGDIYITYFPATKFILLVLCKVDYVVNIKEAEVILQKSITEYRSTNRGPTVAIIDSPNVQLLKSVVKVLDDFPCLNIPYDAHHSQYQFLGWQQKAAEIGMRQCANSSRWLNNRISLARYAHVPLGNIEPDWKIFTADIFFSRALHDQQQVLWISDDGVPDIGGNNFEDVCLVDEVQQPIRNCSGAYRKISVELKIHHLAVNALLKSNQVNEMEEGGFDEAESYAPAFPVLKQLIQRCLADVATSGNVYADEILLHLYRWICSPQSRLHDPALHRLLHKAMQKVFALLLAALRKLGATIIFANFSKVVIDTGKSDLSAAKAYCDSLLKTLQTRDLFEWIELIPVQFWHSLLFMDQYNYGGISAKDNEITDAESQVKILSNWKIAEYLPKKIQDCFITIISQFIYIPWIYATKQAVARASLQQADTCTPSFESHMTEHLKEQLSFHFSNHLFGIVDDILHKRPSDSVHKEDAALKFINYVCAALELDQNVRDDVRKMKKNLLKYMHVKEFAPEAQFSYPCTSFILPNVFCSYCNDCRDLDLCRDSDLQAQEWRCGVAECGQPYNQELIENALIQIVMQRERAYHVQDLVCGMCKQVKAAHLWEQCACAGTFHCKEDAKEFLSSMRILLEVATRQKFQLLQELISTILLND 2206
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 38498677 38522183 - CePI673135_09g021570.1 Cec09g2157 212667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g2157 2206 SMART polmehr3 320 922 IPR006172 GO:0000166(InterPro)|GO:0003676(InterPro)|GO:0003887(InterPro)
Cec09g2157 2206 Pfam DNA polymerase epsilon catalytic subunit A, thumb domain 1025 1200 - -
Cec09g2157 2206 Gene3D - 1020 1204 IPR042087 -
Cec09g2157 2206 SMART DUF1744_2 1545 1918 IPR013697 GO:0003887(InterPro)|GO:0005634(InterPro)|GO:0006260(InterPro)|GO:0008270(InterPro)
Cec09g2157 2206 FunFam DNA polymerase epsilon catalytic subunit 1020 1204 - -
Cec09g2157 2206 Pfam Domain of unknown function (DUF1744) 1578 1918 IPR013697 GO:0003887(InterPro)|GO:0005634(InterPro)|GO:0006260(InterPro)|GO:0008270(InterPro)
Cec09g2157 2206 Gene3D - 319 549 IPR036397 GO:0003676(InterPro)
Cec09g2157 2206 Pfam Zinc finger domain of DNA polymerase-epsilon 2141 2203 IPR054475 -
Cec09g2157 2206 Pfam DNA polymerase family B, exonuclease domain 275 481 IPR006133 -
Cec09g2157 2206 SUPERFAMILY Ribonuclease H-like 140 548 IPR012337 -
Cec09g2157 2206 MobiDBLite consensus disorder prediction 1240 1261 - -
Cec09g2157 2206 Gene3D Palm domain of DNA polymerase 665 1016 IPR023211 -
Cec09g2157 2206 CDD DNA_polB_epsilon_exo 321 525 - -
Cec09g2157 2206 MobiDBLite consensus disorder prediction 19 37 - -
Cec09g2157 2206 FunFam DNA polymerase epsilon catalytic subunit 321 549 - -
Cec09g2157 2206 MobiDBLite consensus disorder prediction 1 57 - -
Cec09g2157 2206 CDD POLBc_epsilon 584 1201 - -
Cec09g2157 2206 MobiDBLite consensus disorder prediction 1243 1258 - -
Cec09g2157 2206 FunFam DNA polymerase epsilon catalytic subunit 137 308 - -
Cec09g2157 2206 PANTHER DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A 86 2176 IPR029703 GO:0000278(PANTHER)|GO:0003677(InterPro)|GO:0003677(PANTHER)|GO:0003887(PANTHER)|GO:0003887(InterPro)|GO:0006260(InterPro)|GO:0006272(PANTHER)|GO:0006281(InterPro)|GO:0006287(PANTHER)|GO:0006297(PANTHER)|GO:0008310(PANTHER)|GO:0008622(PANTHER)|GO:0008622(InterPro)|GO:0045004(PANTHER)
Cec09g2157 2206 FunFam DNA polymerase epsilon catalytic subunit 836 1016 - -
Cec09g2157 2206 Gene3D DNA Polymerase, chain B, domain 1 137 314 - -
Cec09g2157 2206 SUPERFAMILY DNA/RNA polymerases 567 1194 IPR043502 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g2314 Cec-Chr2:40454015 Cec09g2157 Cec-Chr9:38498677 0.00E+00 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g2157 K02324 - csv:101208568 3533.42