Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec09g2165 | ATGTCTTCATCGCTCTGTTCCTCAATTCGGCCATTGCCACCGCACTACTGGCGGCGGAAGAACTTCAGATTCTTCCTATTGCTTCAATCAAACAGATGCATTTGCTTCGCACCTCGCTTCGTTGCTTGCTCGAACAACGACGACTCTGTTGCAATACCCAGACCTACGCCGCTGGCTTTCGATCCTGCGGAGGATCTGTACGGACTTGGCATCGATTTAAAACCTAGGTATGTAGCTTCTAGGGCACCTGAACCCAGGTCCTGGTTTGGCCCAAATGGTCAGTATATTAAAGAGTTACCATGTCCAAGTTGCCGAGGTAGGGGCTATGCGCCGTGTACGGAATGTGGAATTGAAAGATCCCGTGCTGATTGTTCCGTGTGTAATGGAAAGGGTATAGTGACCTGCCACCAATGTCTGGGGGATCGTGTCATATGGGAAGAGTCTATTGATGAACGACCATGGGAGAAAGCACGCTCCACTTCTCCGTTAAGAATGAAGGAAGATGATGAAGTCGATAACTTGGAAATAAAGCTGGAAGAAAAGAAGAAATCAAAGCGTGTTTACCAATCCCCTCCTCCTGAAGTTGGTCTAAAGATCAGTCGATCATTAAAAAGTCTCAATGCCAAAACAGGTATATTTAGTAAGAGAATGAAGATTATCCATCGTGACCCTGCTCTTCATGCCCAGAGAGTGGCTGCAATTAAGAAAGCTAAAGGAAGCGCTGAAGCAAGAAAACGTACTTCTGAAGCTTTGAAAGCATTCTTTAACGATCCAGAAAATCGTCGAAAGCGGAGCATTGCAATGAAAGGAGTAAAATTTTACTGCAAAAACTGCGGCCGTGAAGGACATCGAAGACACTATTGTCCAGAACTTAAGGAAGCAATTGATAGGCGATTCAGATGTCGAGTATGTGGAGAGAAGGGCCATAACCGGAGGACTTGTGAGAAGTCTAGGTCGAATAGTATACCGATGACTGCAACAATTCAGCGCCATTGCGGGATATGCGGTGTGAAGGGCCACAACAGGAGGAACTGTCAGAAGTCCAAGTTGAGCAATCCAACTAACCTACGAATAAATTATGCGCATCGTCGGAGCAGTCGCAATGTGTTGAGGCTGAATTTGATCAGTGAAAATAGCAGAGTGAGGCAGTATCATTGTAGGATCTGCAACAAAAACGGTCACAGTCAGCAGAACTGTCCCAATATTGATAGGAAAGGCAACGGTCTGACTACTAGAAGATCATACAGCTGCAAACTATGCCATGAAAAAGGGCATAATATTAGGACATGCCCCAATAGAAGCCAAAGCAGTGCTCGGGAAAAGATCAGCGAGCCATGGATCACTCATTTGAATGTATCCTTGTCCTAG | 1368 | 45.69 | MSSSLCSSIRPLPPHYWRRKNFRFFLLLQSNRCICFAPRFVACSNNDDSVAIPRPTPLAFDPAEDLYGLGIDLKPRYVASRAPEPRSWFGPNGQYIKELPCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLEEKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGIFSKRMKIIHRDPALHAQRVAAIKKAKGSAEARKRTSEALKAFFNDPENRRKRSIAMKGVKFYCKNCGREGHRRHYCPELKEAIDRRFRCRVCGEKGHNRRTCEKSRSNSIPMTATIQRHCGICGVKGHNRRNCQKSKLSNPTNLRINYAHRRSSRNVLRLNLISENSRVRQYHCRICNKNGHSQQNCPNIDRKGNGLTTRRSYSCKLCHEKGHNIRTCPNRSQSSAREKISEPWITHLNVSLS | 455 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 38572333 | 38580939 | + | CePI673135_09g021650.1 | Cec09g2165 | 212675 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec09g2165 | 455 | ProSiteProfiles | Zinc finger CCHC-type profile. | 386 | 401 | IPR001878 | GO:0003676(InterPro)|GO:0008270(InterPro) | |
Cec09g2165 | 455 | SUPERFAMILY | Retrovirus zinc finger-like domains | 272 | 318 | IPR036875 | GO:0003676(InterPro)|GO:0008270(InterPro) | |
Cec09g2165 | 455 | ProSiteProfiles | Zinc finger CCHC-type profile. | 275 | 290 | IPR001878 | GO:0003676(InterPro)|GO:0008270(InterPro) | |
Cec09g2165 | 455 | Coils | Coil | 164 | 184 | - | - | |
Cec09g2165 | 455 | SMART | c2hcfinal6 | 331 | 347 | IPR001878 | GO:0003676(InterPro)|GO:0008270(InterPro) | |
Cec09g2165 | 455 | SMART | c2hcfinal6 | 274 | 290 | IPR001878 | GO:0003676(InterPro)|GO:0008270(InterPro) | |
Cec09g2165 | 455 | SMART | c2hcfinal6 | 300 | 316 | IPR001878 | GO:0003676(InterPro)|GO:0008270(InterPro) | |
Cec09g2165 | 455 | SMART | c2hcfinal6 | 416 | 432 | IPR001878 | GO:0003676(InterPro)|GO:0008270(InterPro) | |
Cec09g2165 | 455 | SMART | c2hcfinal6 | 385 | 401 | IPR001878 | GO:0003676(InterPro)|GO:0008270(InterPro) | |
Cec09g2165 | 455 | Gene3D | - | 381 | 442 | - | - | |
Cec09g2165 | 455 | Gene3D | - | 272 | 325 | - | - | |
Cec09g2165 | 455 | ProSiteProfiles | Zinc finger CCHC-type profile. | 300 | 316 | IPR001878 | GO:0003676(InterPro)|GO:0008270(InterPro) | |
Cec09g2165 | 455 | PANTHER | ZINC FINGER CCHC DOMAIN CONTAINING PROTEIN | 93 | 351 | IPR051714 | GO:0003727(PANTHER)|GO:0003729(PANTHER)|GO:0005737(PANTHER)|GO:0045182(PANTHER)|GO:2000767(PANTHER) | |
Cec09g2165 | 455 | Pfam | Zinc knuckle | 413 | 432 | IPR025829 | - | |
Cec09g2165 | 455 | SUPERFAMILY | Retrovirus zinc finger-like domains | 378 | 434 | IPR036875 | GO:0003676(InterPro)|GO:0008270(InterPro) |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec09g2165 | - | - | - | 0.0 |