Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g2196 ATGCCTGAGAAAGAGAGCCACAATGTTGTTACAGAGCCTCGTTTGGTAGCTAGAAAGTTTCTGGCTAGGCCTCAGCATGAAGGGTTGGGCGCCATTGTTAGAAGGAGCATTGGAAGGTTTGAGCTGAAATACTTTGACCCTTTTCTAGTTTTGGATGAATTTTCAGTTACTGCCCCAGCTGGGTTCCCAGATCATCCACATAGAGGATTTGAGACAGTGACATACATGCTGCAGGGAAGTGTGACACATGAAGATTTTGAAGGGCACAAGGGAACAATAGGAGCAGGTGACTTGCAATGGATGACTGCAGGTAGAGGAATTGTACATTCAGAGATGCCTGCAGCCCAAGGGACCCAAAAGGGCCTCCAACTATGGATCAACCTCTCTTCCAAGAACAAAATGATTGAGCCAAATTACCAAGAAGTTTCAAGCAAGGGAATTCCAGAAGCTTCAAAAGATGGAGTGAGAGTGAAAGTCATAGCTGGTGAGGCATTGGGAGCAAAATCACCAATCTACACAAGAACTCCAACCATGTACTTGGACTTCACTCTCAAGCCAAAAGCTCATCTCCAGCAGCTGATCCCGTCATCATGGAACGCATTTGTGTACATTCTTGAAGGAGAAGGCGTCTTCGGCAACTCAAAGGCGACATCAACAACAGCACATAACCTACTTCTTCTCGGGTTCGGGGATGGTTTAGAGGTTTGGAATAAGGCAGCCAAGCCTCTTAGGTTCATTTTGGTAGGAGGTGAACCATTGAGTGAGCCTGTTGTGCAATTTGGGCCATTTGTGATGAACACTCAAGAAGAAATTGACCAAACAATTGATGATTTTGATAACTATACCAATGGATTTGAGAAAGCAAGGCATTGGAGATCAGAAGCTGGAATTTCTCTTGGGTTCTAA 906 44.92 MPEKESHNVVTEPRLVARKFLARPQHEGLGAIVRRSIGRFELKYFDPFLVLDEFSVTAPAGFPDHPHRGFETVTYMLQGSVTHEDFEGHKGTIGAGDLQWMTAGRGIVHSEMPAAQGTQKGLQLWINLSSKNKMIEPNYQEVSSKGIPEASKDGVRVKVIAGEALGAKSPIYTRTPTMYLDFTLKPKAHLQQLIPSSWNAFVYILEGEGVFGNSKATSTTAHNLLLLGFGDGLEVWNKAAKPLRFILVGGEPLSEPVVQFGPFVMNTQEEIDQTIDDFDNYTNGFEKARHWRSEAGISLGF 301
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 38898611 38902060 + CePI673135_09g021960.1 Cec09g2196 212706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g2196 301 SUPERFAMILY RmlC-like cupins 14 293 IPR011051 -
Cec09g2196 301 PANTHER PIRIN-RELATED 7 294 IPR012093 -
Cec09g2196 301 CDD cupin_pirin_N 33 128 - -
Cec09g2196 301 Gene3D Jelly Rolls 148 253 IPR014710 -
Cec09g2196 301 Pfam Pirin C-terminal cupin domain 179 283 IPR008778 -
Cec09g2196 301 CDD cupin_pirin_C 176 252 - -
Cec09g2196 301 Pfam Pirin 33 126 IPR003829 -
Cec09g2196 301 PIRSF Pirin 12 292 IPR012093 -
Cec09g2196 301 Gene3D Jelly Rolls 27 279 IPR014710 -
Cec09g2196 301 FunFam pirin 27 163 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec07g1785 Cec-Chr7:33498024 Cec09g2196 Cec-Chr9:38898611 1.20E-117 dispersed
Cec09g2196 Cec-Chr9:38898611 Cec10g0460 Cec-Chr10:5505570 7.50E-133 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g2196 K06911 - csv:101216351 593.964