Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g2213 ATGATGAAGAGGTTCTTGTGTTTCCTATGTAATAATAATCATAATGGGTTTTTCCCTCTCATTATCATTCTTGGTTTTCTTCTCTTAGGTGTCGCCGGAGAGATCTCTGGCGGCGGCGCTGGTGGAGGAGCAGAGAGATCATATGGTATGATAAGTTGGGATGATTTGCGTGTGGATGTTTCGTGGCGGCAGGGGATGAGCTCCGGCGAGGGGTTGGAGAATGGGACAAGAATAATTGTGGTGGATAAGAATGGCTCCGGCGACTCCACGACGGTGCAAGGGGCGGTGGATATGGTTCCTCATAATAACAAACAGAGAGTTAAGATTTGTATTCTTCCTGGCATTTACAGAGAGAAGGTATACATACCAATCACCAAACCGTATATTTCCTTAATCGGAAACAAGAAACGAGTTACAGATACTGTTATTACATGGAATGACAAAGCTTCCGACAAAGATATGAATGGAGTCGAGCTTGGGACGTATAGAACAGCGACGGTTGCGATCGACTCTGACTACTTTTGTGCAACAGGGATCATATTTGAGAATACAATTGTTGCAAAGCCTGGAGATAAGGGAAGACAAGGTGTAGCTTTAAGAATAACAGGAGATAAGGCCATGTTTTATAGAGTAAAATTCTTAGGAGGACAAGATACACTTTTGGATGACATGGGCACACATTACTTCTATCAATGTCACATTCAAGGAAGTGTTGATTTCATATTTGGCACAGCTAGATCACTCTATGAGCAATGTGTTATAACTTCCACAGCAGAGAGCTTTGGAGCAATAGGAGCACATCATCGGGTCTCGCCAAATGATGACACTGGGTTCTCTTTCGTGCGCAGCATAATTAATGGAAGTGGCAAAGTACTCCTGGGAAGAGCATGGGGAAACTATTCAAGAATAATTTATTCTTACTGTTACATTGAAGATGTAATAACTCCATTAGGTTGGGATGACTGGAATGACCCATCAAGACAAAGGACAGTAGTTTTTGGGCAATATAATTGCAGGGGCAGTGGAGCTAACACACAAGGTTGGGTGCCATGGGCAAAGACTTTTAGCTATGAGGAAGTGAGACCTTTTGTAGATAGAAAATATATCAAAGGAGAACAATGGCTTAACTTATGA 1134 42.33 MMKRFLCFLCNNNHNGFFPLIIILGFLLLGVAGEISGGGAGGGAERSYGMISWDDLRVDVSWRQGMSSGEGLENGTRIIVVDKNGSGDSTTVQGAVDMVPHNNKQRVKICILPGIYREKVYIPITKPYISLIGNKKRVTDTVITWNDKASDKDMNGVELGTYRTATVAIDSDYFCATGIIFENTIVAKPGDKGRQGVALRITGDKAMFYRVKFLGGQDTLLDDMGTHYFYQCHIQGSVDFIFGTARSLYEQCVITSTAESFGAIGAHHRVSPNDDTGFSFVRSIINGSGKVLLGRAWGNYSRIIYSYCYIEDVITPLGWDDWNDPSRQRTVVFGQYNCRGSGANTQGWVPWAKTFSYEEVRPFVDRKYIKGEQWLNL 377
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 39055389 39059622 + CePI673135_09g022130.1 Cec09g2213 212723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g2213 377 SUPERFAMILY Pectin lyase-like 77 376 IPR011050 -
Cec09g2213 377 Gene3D - 74 377 IPR012334 -
Cec09g2213 377 Pfam Pectinesterase 79 371 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
Cec09g2213 377 ProSitePatterns Pectinesterase signature 2. 234 243 IPR033131 -
Cec09g2213 377 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 76 376 - GO:0030599(PANTHER)|GO:0045490(PANTHER)|GO:0052689(PANTHER)
Cec09g2213 377 FunFam Pectinesterase 74 377 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec07g1198 Cec-Chr7:27397052 Cec09g2213 Cec-Chr9:39055389 6.10E-66 dispersed
Cec09g0484 Cec-Chr9:4106293 Cec09g2213 Cec-Chr9:39055389 1.50E-72 dispersed
Cec09g1916 Cec-Chr9:36017393 Cec09g2213 Cec-Chr9:39055389 3.60E-53 dispersed
Cec09g2213 Cec-Chr9:39055389 Cec11g0451 Cec-Chr11:4766401 4.20E-64 dispersed
Cec09g2213 Cec-Chr9:39055389 Cec08g1540 Cec-Chr8:27075787 1.20E-71 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g2213 K01051 - csv:101209316 628.246