Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g2217 ATGTCCCCTCTGATTTTCCGATCCCGATTCATTTCCCTGCTGAAGAATCGCCATGGCCGTCTTATGAGCACCGACCTCGCTTCTACTCCTTCCAAAGATGCCATCAATGAGTCTCAGAAGCTCGTCTCCGGTCAGATTCCACCTGATGCTCAAACCACTACTACTTCTTCTTCTTCTTCCACTAGTAAGCCCTTGAATTTCCTCAAGTATAGTTTGATTGGTGCTCTCACCGGTGCAACTGCGGTTGCTGGTTACGCCAGCTATGCCTATAGTTATGATGAAATTGAGGAGAAGGCAAAAGCTCTCCGGCGTTCTGCTAGTCATACTGCCCCGGACGATGTCTCTGGTGTTGATAAAGTTCAGGGCATGCTCTACTCTACGATAATGACAGTTCCTGCAAAACTTGTTGATGTTTACCTGGATTTGAGGAAGACAATTGAAGAACAAGTTAAAGGTTATACTGAACCCAATGCGGAAATGCTTCTTCCAGATTTGCATCCCATGGAACGACATGTGTTTACGCTTGTTCTAGATCTAAATGAGACTCTAGTGTACTCTGATTGGACGCGAGAAAGAGGCTGGCAGACGTTTAAAAGACCTGGAGTTGAGGCTTTCTTGGAACATCTTGCCCAATTTTATGAAATTGTTGTATACTCTGATCAATCAAACATGTATGTTGATCCTGTCATTGATAGGTTGGATCCCAAGCATTGCATACGATATAGGTTGTCAAGAGCAGCTACGAAGTATGAGAACGGAAAGCATTACAGAGACTTGTCAAAGCTTAACAGGGATCCCAGGAAGATTATTTATTTGAGTGGCCATGCATTTGATAGCAGTCTACAACCAGAAAACTCTGTTCCAATAAAGCCATGGAAGTGTGAGACAGATGATACAGCTCTTCTTGATTTTATACCATTTCTTGAATTTGTCGCACGAAATAGTCCAGCTGACATCAGACAAGTACTAGAATCATACAAAGGATGTGATATTCCAACAGAATTTATAAGACGTTCTAAAGAGCATCAAAGGCGGATTCAAGAACAGAAGCAGCAGGGGCGATTATGGAAACCAAGAGCAGCAGATTCTAAGTCACTTTCCTTCTCAGCTTGA 1113 43.04 MSPLIFRSRFISLLKNRHGRLMSTDLASTPSKDAINESQKLVSGQIPPDAQTTTTSSSSSTSKPLNFLKYSLIGALTGATAVAGYASYAYSYDEIEEKAKALRRSASHTAPDDVSGVDKVQGMLYSTIMTVPAKLVDVYLDLRKTIEEQVKGYTEPNAEMLLPDLHPMERHVFTLVLDLNETLVYSDWTRERGWQTFKRPGVEAFLEHLAQFYEIVVYSDQSNMYVDPVIDRLDPKHCIRYRLSRAATKYENGKHYRDLSKLNRDPRKIIYLSGHAFDSSLQPENSVPIKPWKCETDDTALLDFIPFLEFVARNSPADIRQVLESYKGCDIPTEFIRRSKEHQRRIQEQKQQGRLWKPRAADSKSLSFSA 370
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 39077252 39083951 - CePI673135_09g022170.1 Cec09g2217 212727

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g2217 370 MobiDBLite consensus disorder prediction 340 357 - -
Cec09g2217 370 Pfam NLI interacting factor-like phosphatase 174 319 IPR004274 -
Cec09g2217 370 ProSiteProfiles FCP1 homology domain profile. 168 311 IPR004274 -
Cec09g2217 370 SUPERFAMILY HAD-like 160 323 IPR036412 -
Cec09g2217 370 MobiDBLite consensus disorder prediction 41 62 - -
Cec09g2217 370 FunFam Mitochondrial import inner membrane translocase subunit TIM50 159 341 - -
Cec09g2217 370 Gene3D - 158 341 IPR023214 -
Cec09g2217 370 SMART forpap2 171 299 IPR004274 -
Cec09g2217 370 MobiDBLite consensus disorder prediction 340 370 - -
Cec09g2217 370 CDD HAD_FCP1-like 173 289 - -
Cec09g2217 370 PANTHER DULLARD PROTEIN PHOSPHATASE 63 333 IPR050365 GO:0005744(PANTHER)|GO:0030150(PANTHER)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g2217 K17496 - - csv:101207617 663.685
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g648 . . . . . . . . . . Cma01g01081 Cma09g01002 Car01g00956 Car09g00913 Sed07g2743 Cpe06g00810 Cpe02g00817 Bhi09g01749 Tan01g3181 Cmetu01g1982 . . Mch11g1259 . . . . . . . . . . Cone14ag1212 Cone15ag1233 Lsi02g01842 Csa07g00939 . . . . . . Bpe11g00582 . . Bma14g00172 . Cmo01g01127 Cmo09g01002 . . . . . . . . . . . . . Cla09g02063 Cam09g2152 Cec09g2217 . . . . . . Chy01g01165 Cme01g00930
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005181 0 1 1 2 1 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 2 1 1 1 1 1 1 4 2 2 41