Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g2253 ATGCTTGTAATTCTAAGGAATCTCTTTCTTCCTCATCATTTCTTTTCCATAGCCTTGCTTTTATGTGTAAAATCCCTTCTCTTTTCTTCTTGTTACTCCATTGATGAGCAGGGTAGAATTCTTCTTGAATGGAAGAATAATCTAACAAGCCCCACAGATGTTTTGCGTTCGTGGAATCCAGAGGCAGCGACGCCATGTTCATGGTTTGGAGTTATGTGCAACTCCAATGGAGAGGTGGTGGAGATAGTCCTGACACTAGTGGAATTGGAAGGTACATTGCCTACAAATTTTCAGGCTCTCAAGTCCTTGAGGGTCCTTGTGATCTCTGAGACGAATATTACTGGAAGAATTCCGAAAGAATTCGGAGATTATAGTGAGCTCAATGTTCTTGATCTTAGCAGAAATTACCTCTTGGGGAAAATCCCAGAAGAGATTTGCAGGCTGAGCAAGCTGCAGGATTTGTTTCTTCATAACAATGATTTTGAAGGGAACCTACCCTTGAAGATTGGAAATCTTTCGAGCCTTGTGAATTTCCAAATCTCAGACAATAATATCAATGGGGAGGTTCCAAAGAGCATTGGAATGTTGAAGAATCTTTATCTTTTCAAAGCTGGAGGGAATAAATTTCTACAGGGTGTAGTGCCAAGGGAGATTGGAAACTGCAGCAGTTTAACGGTGTTAGGCTTATCCGACACCGGAATCTACGGTCCTCTTCCTTCATCAATAGGGATGCTGCAAAAAATCCAGACCATACACATGTATAGATCACAACTTTTTGGTCCACTCCCAGAAGAGATTACAAACTGTAGTGAACTGCAGACTCTTCGACTGTATCAGAATGGTATTTCTGGACGAATACCAAGACGAATCGGGGAGATGAAAAAGCTTAGCGTCCTTCTTCTATGGTTGAACTTGATGGAGGGTGAAATTCCAGAAGAAATTGGCAACTGCCAGGAACTGGTACTATTTGATTTTTCAGAAAATTCTCTAACGGGAACTATACCAAAAAGTCTAGGCCGGCTTCCAAAACTCGAAGACATTCAACTAAGAATTAATCAGCTTACCGGTACAATACCACCTGAAATTTCTAATATTTCTACTTTGGTTCACCTGGAAATAGACAACAACAAATTATGGGGGGAGATACCAGTTGATATAGGTAACCTCAAGAACCTGCGTACATTGCTCCTATGGGAGAACAAATTAACAGGCCCTATTCCCATCACCCTCCCAGACTGCCCAAATCTCACTTTGATTGATCTATCTTTCAATCAGTTAACAGGTCCAATACCGACACGGATTTTCGCTTTGAAAGGACTCACCAAACTTCTTATGTTATCAAATAATCTATCAGGGATTATTCCTCCTGAAATTGGAAACTGTACCACACTATCCAGGCTAAGACTGTCTAAAAATAAGCTTGGAGGTACTATTCCATCAGAGATGGGAAATCTCAGGAACTTAGAACTTCTTGATATGGGCCAAAACCTTTTTGTTGGAGGATTTCCTTCATCCTTTTCCACATGTAACAAGCTTGAGTCTCTTGACCTACGTTCAAATAGGCTCACTAGTCTTCCAAATACTCTGCCAAAGAGCTTAGTGTACTTTAATGCATCCAACAACAGGCTTAAAGGTCAGCTCAACCCCAACATTGGAGGATTGATGGAATTAACTAAACTAGACCTCAAAAACAACCAGCTTTCAGGGAAAATCCCAGCAGAAATTGTTTCCTGTGAGAAAATCCAGTTTTTAGACCTCAGCAACAATTTCTTCTCTGGAGAACTCCCTAAGGAATTAGGTACATTTGCTTCACTTGAAATTGCTCTTAATCTAAGTTACAATCAATTCTCAGGTCAAATCCCATATGAATTCTCTGGTCTTACCAAGCTAAGTATTCTAGACCTCTCCCACAACAACTTCTCTGGGGAACTTAGCTTTCTTACAGATCTTGAAAACCTAGTCACTCTAAACATCTCCTACAACCATTTCTCTGGCAAATTGCCCGACAAACCCTTCTTTCAAAAGCTCCCTGAAAGCGCCTTTATTGGAAACAAAGACCTCATTTATGTTTCAGATGGAGGAGATACTCCTAAAGACAATAGGGAATCCAGCAACATAAGCAGAGAAGCAATACACATAGCTGTGCCTATCTTGATCAGCATAAGTGCAGTGCTGTTCTTTTTAGGATTCTACATGCTAATTCGAACCCACATGGCTCGTTTCATCCTCTTCACAGAAGGCAACAAATGGGAAATAACCCTGTTTCAAAAGCTCGATTTCTCAATCGACCACATTATAAGAAACTTAACTGCATCCAATGTGATCGGCACAGGAAGCTCCGGTGCCGTTTACAGAATCACAACCCCAAATGGGCAAACAATGGCAGTGAAGAAAATGTGGTCCACCGACGAAAATGGAGCCTTCAACACCGAAATCGAAACTTTGGGATCAATTCGACACAAGAACATAATTAGATTACTGGGTTGGGGATCCAACAGGAGTTTGAAGCTCTTGTTTTATGATTACCTTCCAAATGGAAACTTGAGCTCCCTTATCCATGGCCCTGAAAAAGGAGAAGCAGAATGGGAAGTCAGATATGAAGTCCTTTTAGGAGTGGCTCACGCTCTAGCTTATCTTCACCATGATTGTATTCCACCAATCGTACATGGCGATGTGAAAACTATGAATATCCTGCTCGGCCATGACTTCGAACCATACCTAGCCGACTTTGGGATAGCCAAAATCGTGAGTACAAAAAGCGGCAATGATAATTCAGAGACGCCATCGTTGAGACCTCAACTTGCTGGCTCTTTCGGCTACATGGCCCCTGAACAAGGGTCGATGTTGAGAGTTACAGAGAAGAGCGATGTGTATAGCTTCGGTGTGGTGATAATGGAAGTTCTAACAGGGCGGCACCCGCTGGACCCGACTTTACCAGGAGGATCCAATTTGGTGCAATGGGTTCAAGATCATTTCGCCACACACCGAAACACAGGCGACATTTTCGATTCAAAGCTCAGAGGAAGAACCGATCCCACAATCCACGAAATGATTCAAACCCTAGCCGTCGCATTGGTCTGTGCCAGCGTTAAGGCCGACGATCGACCGCCTATGAAAGATGTCGTCACCATGCTCGCGGAGATTCGACATGTCGAATCGGGAAGAGCTGCTACCGACGTCTCCATGCCGGAAATGGCGGTAGTGGTTCAATCGCCGGCGTAG 3222 42.83 MLVILRNLFLPHHFFSIALLLCVKSLLFSSCYSIDEQGRILLEWKNNLTSPTDVLRSWNPEAATPCSWFGVMCNSNGEVVEIVLTLVELEGTLPTNFQALKSLRVLVISETNITGRIPKEFGDYSELNVLDLSRNYLLGKIPEEICRLSKLQDLFLHNNDFEGNLPLKIGNLSSLVNFQISDNNINGEVPKSIGMLKNLYLFKAGGNKFLQGVVPREIGNCSSLTVLGLSDTGIYGPLPSSIGMLQKIQTIHMYRSQLFGPLPEEITNCSELQTLRLYQNGISGRIPRRIGEMKKLSVLLLWLNLMEGEIPEEIGNCQELVLFDFSENSLTGTIPKSLGRLPKLEDIQLRINQLTGTIPPEISNISTLVHLEIDNNKLWGEIPVDIGNLKNLRTLLLWENKLTGPIPITLPDCPNLTLIDLSFNQLTGPIPTRIFALKGLTKLLMLSNNLSGIIPPEIGNCTTLSRLRLSKNKLGGTIPSEMGNLRNLELLDMGQNLFVGGFPSSFSTCNKLESLDLRSNRLTSLPNTLPKSLVYFNASNNRLKGQLNPNIGGLMELTKLDLKNNQLSGKIPAEIVSCEKIQFLDLSNNFFSGELPKELGTFASLEIALNLSYNQFSGQIPYEFSGLTKLSILDLSHNNFSGELSFLTDLENLVTLNISYNHFSGKLPDKPFFQKLPESAFIGNKDLIYVSDGGDTPKDNRESSNISREAIHIAVPILISISAVLFFLGFYMLIRTHMARFILFTEGNKWEITLFQKLDFSIDHIIRNLTASNVIGTGSSGAVYRITTPNGQTMAVKKMWSTDENGAFNTEIETLGSIRHKNIIRLLGWGSNRSLKLLFYDYLPNGNLSSLIHGPEKGEAEWEVRYEVLLGVAHALAYLHHDCIPPIVHGDVKTMNILLGHDFEPYLADFGIAKIVSTKSGNDNSETPSLRPQLAGSFGYMAPEQGSMLRVTEKSDVYSFGVVIMEVLTGRHPLDPTLPGGSNLVQWVQDHFATHRNTGDIFDSKLRGRTDPTIHEMIQTLAVALVCASVKADDRPPMKDVVTMLAEIRHVESGRAATDVSMPEMAVVVQSPA 1073
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 39393014 39396330 + CePI673135_09g022530.1 Cec09g2253 212763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g2253 1073 Gene3D Ribonuclease Inhibitor 435 692 IPR032675 -
Cec09g2253 1073 SUPERFAMILY Protein kinase-like (PK-like) 760 1045 IPR011009 -
Cec09g2253 1073 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 34 188 - -
Cec09g2253 1073 FunFam Putative LRR receptor-like serine/threonine-protein kinase 754 842 - -
Cec09g2253 1073 Gene3D Phosphorylase Kinase; domain 1 748 842 - -
Cec09g2253 1073 Gene3D Ribonuclease Inhibitor 188 289 IPR032675 -
Cec09g2253 1073 Gene3D Ribonuclease Inhibitor 34 187 IPR032675 -
Cec09g2253 1073 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 843 1062 - -
Cec09g2253 1073 SMART LRR_typ_2 554 578 IPR003591 -
Cec09g2253 1073 SMART LRR_typ_2 414 437 IPR003591 -
Cec09g2253 1073 SMART LRR_typ_2 341 365 IPR003591 -
Cec09g2253 1073 SMART LRR_typ_2 148 172 IPR003591 -
Cec09g2253 1073 SMART LRR_typ_2 650 683 IPR003591 -
Cec09g2253 1073 SMART LRR_typ_2 509 532 IPR003591 -
Cec09g2253 1073 SMART LRR_typ_2 389 413 IPR003591 -
Cec09g2253 1073 ProSiteProfiles Protein kinase domain profile. 769 1048 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec09g2253 1073 Pfam Protein kinase domain 772 975 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec09g2253 1073 SUPERFAMILY L domain-like 376 671 - -
Cec09g2253 1073 ProSitePatterns Protein kinases ATP-binding region signature. 775 798 IPR017441 GO:0005524(InterPro)
Cec09g2253 1073 PANTHER OS04G0122200 PROTEIN 440 1047 IPR051809 -
Cec09g2253 1073 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 208 422 - -
Cec09g2253 1073 Pfam Leucine rich repeat 463 522 IPR001611 GO:0005515(InterPro)
Cec09g2253 1073 Pfam Leucine rich repeat 102 161 IPR001611 GO:0005515(InterPro)
Cec09g2253 1073 Gene3D Transferase(Phosphotransferase) domain 1 843 1065 - -
Cec09g2253 1073 Pfam Leucine rich repeat N-terminal domain 35 74 IPR013210 -
Cec09g2253 1073 Gene3D Ribonuclease Inhibitor 290 368 IPR032675 -
Cec09g2253 1073 SUPERFAMILY L domain-like 56 403 - -
Cec09g2253 1073 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 431 525 - -
Cec09g2253 1073 Pfam Leucine Rich Repeat 652 669 IPR001611 GO:0005515(InterPro)
Cec09g2253 1073 Pfam Leucine Rich Repeat 581 601 IPR001611 GO:0005515(InterPro)
Cec09g2253 1073 Pfam Leucine Rich Repeat 368 389 IPR001611 GO:0005515(InterPro)
Cec09g2253 1073 Pfam Leucine Rich Repeat 415 434 IPR001611 GO:0005515(InterPro)
Cec09g2253 1073 Pfam Leucine Rich Repeat 609 627 IPR001611 GO:0005515(InterPro)
Cec09g2253 1073 Pfam Leucine Rich Repeat 557 577 IPR001611 GO:0005515(InterPro)
Cec09g2253 1073 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 526 692 - -
Cec09g2253 1073 SMART serkin_6 769 1045 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec09g2253 1073 Gene3D Ribonuclease Inhibitor 369 434 IPR032675 -
Cec09g2253 1073 ProSitePatterns Serine/Threonine protein kinases active-site signature. 887 899 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec09g2253 1073 ProSiteProfiles Leucine-rich repeat profile. 511 532 IPR001611 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g1444 Cec-Chr1:29113037 Cec09g2253 Cec-Chr9:39393014 1.40E-91 dispersed
Cec09g0979 Cec-Chr9:9345017 Cec09g2253 Cec-Chr9:39393014 2.50E-89 dispersed
Cec09g2253 Cec-Chr9:39393014 Cec10g0784 Cec-Chr10:12784637 2.20E-65 dispersed
Cec09g2253 Cec-Chr9:39393014 Cec06g1916 Cec-Chr6:32528725 2.40E-16 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72287 PF00069 Pkinase 1.10E-35 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g2253 - - - 0.0