Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g2255 ATGCCGCAGGAATTAAGCTTTGTGAATTCGAAATTAATGTCTCCGAATAAGAATGTGAGAGGATTGAAAGCTCTGGTTGCGATTTGTAATGATCATGCTTCTTCTGATTCTGCGATTTCTGAGGAAGTTATCAATGACCATGAATTGGCTCATCGCAAAGCCGAAGAAGCTGCATCCAGGAGGAATCAAGCAGCAGAATGGCTACGCCAAATGGATCATGGAGCATCAGGAGTACTATCCAAGGAGCCCTCTGAAGAAGAATTCTGTCTTGCACTTCGCAATGGCCTTATCCTCTGCAATGTCCTCAACAAAGTCAATCCTGGTGCTGTTCTTAAGGTGGTGGAGAGTCCAGTTGTAACAGTTCAGTCAGCAGAAGGAGCTGCACAATCAGCAATCCAGTATTTTGAGAACATGAGGAACTTCTTGGAGGCAGTTAAAGACATGAAGCTCTTGACATTTGAAGCTTCTGACTTGGAAAAGGGAGGTACTTCAGGAAAAGTTGTAGATTGTATTCTCTGCTTGAAAGGATATTACGAGTGGAAGCAAGCTGGTGGGATTGGGGTTTGGAGATATGGAGGAACTGTACGGATCACATCTCTCGCCAGAAGTTCACCATGCATAACTGAAAGTGAGAGTACAGACGAGTCGGTAGACGAATCAGATTTGTCTCAGTTCGAGCAGCTACTAGACTTCCTCCATCTTTCTAATGAAGTTTCAGTTGAAGAATCCAGAACTTGCAGTGCTCTTGCTTTTCTTTTTGATCGTTTTGGACTTAAACTTCTTCAGGCATACCTCCGAGAGAGTGATGGGATTGAAGATTTGCCTTTAAATGCAATGGTAATTGATGCATTACTTAGCAAGGTTGTTAAGGATTTCTCTGCACTGCTTGTGTCTCAAGGCACTCAGCTTGGACTCTTTCTGAAGAAAATATTGAAAAGTGACTTGAGTTCACTGTCAAAATCTGAATTCATTGAAGCAATTTCCCGATATATCAACCAAAGAGCTAATATGGCATCAAGCGACTTCTCCAAGTTCTGTGTTTGTGGAGGAAAACGAGAGGTTATTCATAGGGCTCCTGCTGGCCATGATGAACTGGTTCATGCTCAACAGAATCAGATTCAGGAGCTAAAATCAGCATTTCAAGAAACCAAACTTGAAGTTAAACACATCCAGTCTCAATGGAACGAAGAAGTTGAAAGGCTAGAACATCATCTCAAGGGCCTTGAGATGGCTTCCTCTTCTTACCACATGGTCTTGGAAGAGAATCGTATACTTTACAATCAAGTTCAAGACCTTAAAGGAACAATAAGGGTGTACTGTAGAGTGAGGCCTTTCTTATCAGGACCATCAAATCAGCATTCTACGGTGGACTACATTGGAGAAAATGGGAACATTATGATTGCAAATCCTCTAAAGCAAGGGAAAGAAGCAAGAAGAGTATTTTCCTTCAATAAAGTTTATGGAACTAATGTTACCCAAGAAAAAATATATATCGACACTCAACCGTTGATCAGATCTGTTCTTGATGGTTTTAATGTTTGCATCTTCGCTTATGGACAAACTGGCTCGGGAAAGACGTATACAATGAGTGGCCCAGATTTGATGACTGAGGACACATGGGGCGTTAATTATCGAGCTCTCAATGACTTATTCCAGATATCAAATGCAAGGTCGGATATGATAAAGTATGAAGTTGGAGTTCAAATGATTGAAATATACAATGAGCAAGTGAGAGATTTGTTGGTCAGTGATGGCTCAAACAGAAGATATCCTTTTAAACAACAAAATATACGAAACAACTCTCAACTTAGTGGCCTCAATGTGCCTGATGCAAGTTGGGTTCCAGTGACATGTACTCAAGATGTTCTTAGTTTGATGAGAATTGGCCAGAAGAATCGAGCTATTGGTGCTACGGCTTTAAATGAGAGAAGTAGTCGCTCGCACAGTGTTTTGACAATTCATGTCCTTGGAAAAGATTTGGTCTCCGGATCCACCCTTAGGGGGTGTCTTCATCTAGTAGATCTAGCTGGGAGTGAAAGAGTGGACAAATCTGAAGCTGTTGGCGACAGACTAAAGGAAGCACAACATATAAACAAATCCCTCTCTGCACTTGGAGATGTAATTTCTGCCCTTGCACAAAAGAGTGCACATATTCCATTCAGGAATAGCAAACTCACTCAACTCCTACAAGATTCTTTAGGTGGACAAGCTAAGACATTGATGTTTGTACATATAAATCCCGAAGTTGATGCTCTTGGAGAGACAATTAGCACGCTTAAGTTTGCTGAGAGAGTTGCCTCCATAGAATTAGGTGCAGCTCGCTGTAATAAAGAAAATGGTCAAATTCGAGAACTTAAGGATGAGATATCAAATCTTAAATCGGCATTGGAGAGGAAGGATGCAGAGCTTGAACAACTAAAAAGTGGCAATGCTCGAGCCTTCGTAGAAATTCAGAAGCCAAGAGCTGCCTCTCCCTTCCGCGTTCTTAGACATGGTACCAATGGAGGTGCTAAGTCTGAAAATTGTCAACGGCCTTTGGATGATGCTAAAACTTCGGAGGCAAGAAGCTACTCTTCAGGAAAGCAAAGAAGGTCAAGATTTCCCTCTACATTCTCGGAGAAAGATGCAATAAAAATGCCATTATTAGCTGAAGAGAGATCAACAACTAGTTCAAGCTCTGGAAACCCAAGGTCACCATCTCCACCAGTTAGGAGATCAATATCAACAGATAGGGGTGCCTTTATAAGAAGCAAGGTTAAAATGGAGATGAACGAGAACCAACCAATAGCCAAGCCTTCATTTCCTGCGAGAGTGCACGTTAACAAGTCGATGGCCGCAGTCCCAGCAATCGATAATCGAGGAAGAGTAAACATCAGTTGTCAAGAGCATGAAAACTTCTCTGATGCATTGGTTGGTATCCAAAAAGCAATGGCCTCAACAAAGAAGAAGCAACTGGTTTGCCAAGAAAACAATGAAGATGAACAACAGGTGAAGCAGTCTCTAAATACAATGCAAGGTGGTGCAAGGAGAAGCAGAAATGAAGGCAAAACCAAAGCAAAGCAACAGCAGTTACCGGGTGCAGCAGCTAGGATTAATAATCAAAAGCAGCCAACAACATTACTTACTGATATTAATGCTGCTGTAAAAATGGAGGATGCAAGAAAGAGTGAATTCTCTGAAATGGAGAACGAGCATTTTCTTGTGGGATTGCCTCTTGATGGTGCTTTGAAGGTGAAAAAAGCTCGTCAGAACTTCCCAAGAGACTCACAGAATCTGGAACCACCAAGAATACCAATTTCTGGCATCGAAAGCTTAATGAGTACAAGTAAAGTTGAGAATGGGAGTCGCAATCAAACTGAAGTTAGCGACAAATCAATGTCTGAATTTAGAAGAAGTAGATCTACTCCTCGTGGGAAATTTTTGGTAATACCATGA 3435 41.6 MPQELSFVNSKLMSPNKNVRGLKALVAICNDHASSDSAISEEVINDHELAHRKAEEAASRRNQAAEWLRQMDHGASGVLSKEPSEEEFCLALRNGLILCNVLNKVNPGAVLKVVESPVVTVQSAEGAAQSAIQYFENMRNFLEAVKDMKLLTFEASDLEKGGTSGKVVDCILCLKGYYEWKQAGGIGVWRYGGTVRITSLARSSPCITESESTDESVDESDLSQFEQLLDFLHLSNEVSVEESRTCSALAFLFDRFGLKLLQAYLRESDGIEDLPLNAMVIDALLSKVVKDFSALLVSQGTQLGLFLKKILKSDLSSLSKSEFIEAISRYINQRANMASSDFSKFCVCGGKREVIHRAPAGHDELVHAQQNQIQELKSAFQETKLEVKHIQSQWNEEVERLEHHLKGLEMASSSYHMVLEENRILYNQVQDLKGTIRVYCRVRPFLSGPSNQHSTVDYIGENGNIMIANPLKQGKEARRVFSFNKVYGTNVTQEKIYIDTQPLIRSVLDGFNVCIFAYGQTGSGKTYTMSGPDLMTEDTWGVNYRALNDLFQISNARSDMIKYEVGVQMIEIYNEQVRDLLVSDGSNRRYPFKQQNIRNNSQLSGLNVPDASWVPVTCTQDVLSLMRIGQKNRAIGATALNERSSRSHSVLTIHVLGKDLVSGSTLRGCLHLVDLAGSERVDKSEAVGDRLKEAQHINKSLSALGDVISALAQKSAHIPFRNSKLTQLLQDSLGGQAKTLMFVHINPEVDALGETISTLKFAERVASIELGAARCNKENGQIRELKDEISNLKSALERKDAELEQLKSGNARAFVEIQKPRAASPFRVLRHGTNGGAKSENCQRPLDDAKTSEARSYSSGKQRRSRFPSTFSEKDAIKMPLLAEERSTTSSSSGNPRSPSPPVRRSISTDRGAFIRSKVKMEMNENQPIAKPSFPARVHVNKSMAAVPAIDNRGRVNISCQEHENFSDALVGIQKAMASTKKKQLVCQENNEDEQQVKQSLNTMQGGARRSRNEGKTKAKQQQLPGAAARINNQKQPTTLLTDINAAVKMEDARKSEFSEMENEHFLVGLPLDGALKVKKARQNFPRDSQNLEPPRIPISGIESLMSTSKVENGSRNQTEVSDKSMSEFRRSRSTPRGKFLVIP 1144
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 39404697 39412601 - CePI673135_09g022550.1 Cec09g2255 212765

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g2255 1144 MobiDBLite consensus disorder prediction 991 1036 - -
Cec09g2255 1144 MobiDBLite consensus disorder prediction 852 866 - -
Cec09g2255 1144 ProSiteProfiles Kinesin motor domain profile. 435 768 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cec09g2255 1144 MobiDBLite consensus disorder prediction 884 905 - -
Cec09g2255 1144 MobiDBLite consensus disorder prediction 1102 1122 - -
Cec09g2255 1144 Gene3D - 49 179 IPR036872 -
Cec09g2255 1144 SMART ch_5 60 177 IPR001715 GO:0005515(InterPro)
Cec09g2255 1144 CDD CH_AtKIN14-like 60 175 - -
Cec09g2255 1144 Pfam Calponin homology (CH) domain 60 179 IPR001715 GO:0005515(InterPro)
Cec09g2255 1144 MobiDBLite consensus disorder prediction 825 910 - -
Cec09g2255 1144 Coils Coil 366 411 - -
Cec09g2255 1144 Gene3D Kinesin motor domain 377 770 IPR036961 -
Cec09g2255 1144 PANTHER KINESIN-LIKE PROTEIN KLP-3 41 1022 IPR027640 GO:0003777(InterPro)|GO:0007017(PANTHER)|GO:0007018(InterPro)|GO:0008017(PANTHER)|GO:0015630(PANTHER)
Cec09g2255 1144 SMART kinesin_4 433 776 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cec09g2255 1144 SUPERFAMILY Calponin-homology domain, CH-domain 54 196 IPR036872 -
Cec09g2255 1144 ProSiteProfiles Calponin homology (CH) domain profile. 58 179 IPR001715 GO:0005515(InterPro)
Cec09g2255 1144 FunFam kinesin-like protein KIN-14F 430 809 - -
Cec09g2255 1144 FunFam kinesin-like protein KIN-14F 50 179 - -
Cec09g2255 1144 Coils Coil 775 809 - -
Cec09g2255 1144 MobiDBLite consensus disorder prediction 1083 1144 - -
Cec09g2255 1144 Pfam Kinesin motor domain 441 768 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cec09g2255 1144 MobiDBLite consensus disorder prediction 991 1010 - -
Cec09g2255 1144 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 436 804 IPR027417 -
Cec09g2255 1144 PRINTS Kinesin heavy chain signature 669 687 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cec09g2255 1144 PRINTS Kinesin heavy chain signature 510 531 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cec09g2255 1144 PRINTS Kinesin heavy chain signature 718 739 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cec09g2255 1144 PRINTS Kinesin heavy chain signature 638 655 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g2255 K27887 - - csv:101221138 1969.51
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g0530 Cec-Chr4:21518664 Cec09g2255 Cec-Chr9:39404697 5.10E-132 dispersed
Cec07g1159 Cec-Chr7:26975015 Cec09g2255 Cec-Chr9:39404697 9.70E-85 dispersed
Cec09g2255 Cec-Chr9:39404697 Cec10g1683 Cec-Chr10:31344522 8.30E-140 dispersed
Cec09g2255 Cec-Chr9:39404697 Cec05g1655 Cec-Chr5:27163072 3.00E-73 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g727 Blo03g00494 . . . . . . . . . Cma01g01058 Cma09g01033 Car01g00932 Car09g00939 . Cpe06g00841 Cpe02g00838 Bhi09g01820 . . . . Mch11g1312 . . . . . . . . Cone6ag0001 Cone9ag0003 . . Lsi02g01801 Csa07g01062 . . . . . . Bpe11g00603 . . Bma14g00667 . Cmo01g01099 Cmo09g01035 . . . . . . . . . . . . . Cla09g02100 Cam09g2186 Cec09g2255 . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007328 0 1 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 3 2 1 1 1 1 1 2 1 1 1 1 1 36