Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g2322 ATGGCGGCCAAATCTGTATCTCAAAATCGAATCAGAGCCAAACTCCATTTCCTCTATGCAATTCTTCTACTGCAGTTTGCTACCTTCGGATTGGCAGCCACAGCCAAGCTTCATCCAGAAGAAGTGAAAGCTTTGAAAGAGATCGAGAAGAAGATAGGGAAAAACGATTGGAATTTTAGCGTAGATCCTTGCAGTGGAGAAGGAAAATGGCGAGTCGTTAATGGAAGAAAAGGATTCGAAAGCTCCGTCACCTGTGATTGCTCTTTCAACCACAACTCCACTTGCCGTATCGTCGCCATAGCTCTGAAGTCCCAGAATCTATCAGGCATTGTGCCACCAGAGTTTTCCAAGCTTCGCTTCCTCAAACAGCTAGACCTCAGTCGAAACTGTCTCACTGGTTCTATTCCTTCACAATGGGCTACCATGCGATTGGTAGAACTCTCTTTCATGGGAAACAAATTGTCTGGCCCATTCCCGAAAGTTCTTACTAATATCACCACCCTCAGAAACCTGAGCATCGAAGGAAATCAATTTTCCGGCCGAATTCCGCCAGAGGTCGGAAAACTAGTTAGTTTGGAAAAATTAGTTCTGTCATCAAATGGCCTCACCGGAGAATTGCCTAAAGCACTAGCGAAATTGTCGAACTTAACTGATGTGAGGATAAGTGACAACAACTTCTCTGGAAAGATACCTGAGTTCATTAGTAATTGGGCACAGATTGAAAAACTGCATATACAAGGCTGCTCCCTCGAGGGGCCTATACCCTTAAGTATCTCCACCATGACAAGTTTAACTGATCTGAGAATATCTGACTTAAAAGGTGGAAGGTCTCCTTTTCCGTCGTTGAGCAAAATGAAATCCCTGAAGACTCTGATACTGAGGAAGTGCTTAATTTTTGGAGAAGTCCCGAAATACATCGGGGACATGAAAAAATTGAAAAACTTAGACCTCAGTTACAATGACTTGACTGGCGAAGTTCCTGCATCTTTAGAACGACTGGAAAAAATAGATTACATAATTTTGACAGGAAACAAGCTCAATGGAATTATTCCTGGTTGGATTTTAGGAAGCAACAAGAACGTAGATCTTTCTAATAACAACTTCACTTGGGAAAACTCAAGCCCAGCTGAGTGTCCTCGTGGTAGTGTAAATTTAGTAGAGACTTACTCACCGTCTGCAGAAAAATTAACTAGAATCCATCCCTGCCTAAAAAGGAACTTTCCGTGTTCTGCATCAAGGGAACAGCATCACTACTCATTGCACATTAACTGTGGCGATAAAGAAGCATTTGTAAGGGGCGAAAGGTATGAAGCGGATAGAGAAGGTGCTTCAATGTTTTATACTGGTCAGAATTGGGCTTTTAGCAGCACGGGAAGCTTTATGGACAATGATGTTGATGCTGATAACTACATCATAACAAATACATCTGCTCTTTCAAATGTCTCTGTGACTGATTCAGAACTGTACACAAAAGCAAGAAACTCTCCTCAATCTCTTACATACTATGGGCTATGTCTCATAAATGGGAATTATACTGTTAAACTCCACTTTGCAGAGATTGTATTTATAAATGACAGTTCATTCAACAGCCTGGGGAGGCGAGTTTTTGATGTGTACATTCAGGAAAAGCTAGTCCTGAAAGATTTTGATATAGAACATGAAGCAAGGGGTACTGGTAAGCCCATTATGAAAACATTTACTGCAGTTGTCACAAGTCATACATTAAAAATCCATTTCTACTGGGCTGGAAGAGGAACAACAGGAATTCCACTTAGGGGAAATTATGGTCCTCTGATATCAGCTATTTCTGTAGATCCCAATTTTACACCTCCTAAGAACCTCGTGAAGAAGCATCACACCATCATAATTATTGGGACAGCAGCAGCAGCTTTTGTTCTCCTTCTTCTGGTGCTATGCATTATGAGGAGGAACGGATGGCTGGGAGGCAAGGCATCCGTATATAAAGAGCTTAGAGGTATAGATCTGCAAACAGGATTATTTACAATAAGACAGATTAAAGCAGCCACTAAAAGTTTTGATGCTGCGAACAAAGTTGGGGAAGGTGGTTTTGGTGCAGTTTACAAGGGTCTCTTGTCAGATGGTACTATAATTGCAGTCAAGCAGCTCTCGTCAAAATCAAAGCAAGGAAATCGAGAATTTGTTAATGAAATAGGCATGATATCTGCGCTGCAACATCCAAACCTTGTCAAGCTTTATGGATGTTGTGTTGATGGGAACCAACTAATGTTGATTTATGAATACATGGAAAATAATTGCTTATCACGTGCCCTTTTCAGAAATGACCCAGCTTCTAAATTGAGATTGGACTGGCCCACCAGGCAGAAAATTTGTCTGGGAATAGCTAGAGGTTTGGCCTATCTGCATGAGGAATCAAGACTAAAAGTCGTACATAGGGATATCAAGACAAGTAATGTATTGCTTGATAAGGATTTCAATGCTAAAATTTCTGATTTTGGCTTGGCTAAGCTTCATGAAGATGACAATACCCATATCAGCACTAGGGTTGCTGGAACCATTGGTTATATGGCTCCTGAATATGCAATGCGTGGATGCTTGACCTGCAAAGCTGATGTTTATAGCTTTGGAGTTGTTGCCCTGGAAATTGTCAGTGGCAAAAGCAATACCAACTACAGGCCTAAAGAGGAATTTGTTTACCTTCTTGATTGGGCATCTGTTCTGCAAGAAAAGGGAAGCCTATTGGAGTTGGTGGATCCAGCCTTGGGCTCAGATTATTCATCAGAAGAAGCAATGGTGATGCTGAATGTGGCTCTCCTCTGCACCAACGCATCCCCAACTCTGCGGCCTCTAATGTCCCAAGTTGTCAGCATGCTCGAAGGTCGAACTCCAGTGCAAGCACTTCTTTCTGACCCAGGATTTTCAGCCATCAATTCCAAATTAAAGGCTCTCAGAAATCACTTTTGGCAACAATTGAGCCCAACTCACAGTTTATCATTGGACGATTTCCCTAGTGATTCCTTGAGTTCGAATGTGGACCCGGAGGCAGAAGAGAATTACAATCTTGTAAGACCCCATTCTGTTAACATGACTGGAACAAATTAG 3081 41.87 MAAKSVSQNRIRAKLHFLYAILLLQFATFGLAATAKLHPEEVKALKEIEKKIGKNDWNFSVDPCSGEGKWRVVNGRKGFESSVTCDCSFNHNSTCRIVAIALKSQNLSGIVPPEFSKLRFLKQLDLSRNCLTGSIPSQWATMRLVELSFMGNKLSGPFPKVLTNITTLRNLSIEGNQFSGRIPPEVGKLVSLEKLVLSSNGLTGELPKALAKLSNLTDVRISDNNFSGKIPEFISNWAQIEKLHIQGCSLEGPIPLSISTMTSLTDLRISDLKGGRSPFPSLSKMKSLKTLILRKCLIFGEVPKYIGDMKKLKNLDLSYNDLTGEVPASLERLEKIDYIILTGNKLNGIIPGWILGSNKNVDLSNNNFTWENSSPAECPRGSVNLVETYSPSAEKLTRIHPCLKRNFPCSASREQHHYSLHINCGDKEAFVRGERYEADREGASMFYTGQNWAFSSTGSFMDNDVDADNYIITNTSALSNVSVTDSELYTKARNSPQSLTYYGLCLINGNYTVKLHFAEIVFINDSSFNSLGRRVFDVYIQEKLVLKDFDIEHEARGTGKPIMKTFTAVVTSHTLKIHFYWAGRGTTGIPLRGNYGPLISAISVDPNFTPPKNLVKKHHTIIIIGTAAAAFVLLLLVLCIMRRNGWLGGKASVYKELRGIDLQTGLFTIRQIKAATKSFDAANKVGEGGFGAVYKGLLSDGTIIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCVDGNQLMLIYEYMENNCLSRALFRNDPASKLRLDWPTRQKICLGIARGLAYLHEESRLKVVHRDIKTSNVLLDKDFNAKISDFGLAKLHEDDNTHISTRVAGTIGYMAPEYAMRGCLTCKADVYSFGVVALEIVSGKSNTNYRPKEEFVYLLDWASVLQEKGSLLELVDPALGSDYSSEEAMVMLNVALLCTNASPTLRPLMSQVVSMLEGRTPVQALLSDPGFSAINSKLKALRNHFWQQLSPTHSLSLDDFPSDSLSSNVDPEAEENYNLVRPHSVNMTGTN 1026
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 40108638 40120111 + CePI673135_09g023220.1 Cec09g2322 212832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g2322 1026 Gene3D Ribonuclease Inhibitor 275 377 IPR032675 -
Cec09g2322 1026 Gene3D Transferase(Phosphotransferase) domain 1 755 960 - -
Cec09g2322 1026 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 43 206 - -
Cec09g2322 1026 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 237 384 - -
Cec09g2322 1026 FunFam Putative LRR receptor-like serine/threonine-protein kinase 755 963 - -
Cec09g2322 1026 CDD STKc_IRAK 685 953 - -
Cec09g2322 1026 SUPERFAMILY L domain-like 85 369 - -
Cec09g2322 1026 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 30 966 IPR051824 -
Cec09g2322 1026 Pfam Leucine rich repeat 287 346 IPR001611 GO:0005515(InterPro)
Cec09g2322 1026 Gene3D Ribonuclease Inhibitor 38 274 IPR032675 -
Cec09g2322 1026 ProSiteProfiles Protein kinase domain profile. 679 961 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec09g2322 1026 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 417 607 - -
Cec09g2322 1026 Pfam Malectin domain 419 602 IPR021720 -
Cec09g2322 1026 SMART serkin_6 679 949 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec09g2322 1026 SUPERFAMILY Protein kinase-like (PK-like) 664 952 IPR011009 -
Cec09g2322 1026 Gene3D Phosphorylase Kinase; domain 1 650 754 - -
Cec09g2322 1026 ProSitePatterns Serine/Threonine protein kinases active-site signature. 802 814 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec09g2322 1026 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 648 754 - -
Cec09g2322 1026 ProSitePatterns Protein kinases ATP-binding region signature. 685 707 IPR017441 GO:0005524(InterPro)
Cec09g2322 1026 Pfam Leucine Rich Repeat 191 213 IPR001611 GO:0005515(InterPro)
Cec09g2322 1026 Pfam Leucine Rich Repeat 121 140 IPR001611 GO:0005515(InterPro)
Cec09g2322 1026 Pfam Leucine Rich Repeat 215 237 IPR001611 GO:0005515(InterPro)
Cec09g2322 1026 Pfam Leucine Rich Repeat 168 189 IPR001611 GO:0005515(InterPro)
Cec09g2322 1026 Gene3D - 415 606 - -
Cec09g2322 1026 Pfam Protein tyrosine and serine/threonine kinase 682 893 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec09g2322 Cec-Chr9:40108638 Cec11g1780 Cec-Chr11:31983638 5.80E-209 dispersed
Cec09g2322 Cec-Chr9:40108638 Cec11g1779 Cec-Chr11:31966794 5.60E-204 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72288 PF07714 PK_Tyr_Ser-Thr 2.90E-49 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g2322 - - - 0.0