Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g2339 ATGCAGACCCATCACCGTAAGAAGAATTCTGCAGAATTGGACTTTTTCTCTGAATACGGCGATGCCAACAGATTCAAAGTTCGCGAAGTTATTGGAAAGGGGAGTTATGGTGTGGTTTGTTCAGCTGTTGACACTCTCACTAATGAAAAAGTGGCAATAAAGAAGATACACGATATTTTTGAACATGTATCTGATGCTGCCCGTATTCTTCGTGAGATAAAGCTGCTCAGGCTTCTACGTCATCCTGATATTGTTGAAATTAAACACATTATGTTACCACCTTCTCGTAGGGGGTTCAAAGATATTTTTGTTGTGTTTGAGTTGATGGAATCAGATTTGCATCAAGTCATCAAGGCCAACGATGATTTAACAAAAGAGCACTATCAATTTTTCCTTTATCAGCTACTCCGTGCGCTGAAATATATTCACACAGCAAATGTCTACCATCGGGATTTAAAACCAAAGAACATATTGGCAAATGCAAATTGCAAACTCAAAATCTGTGATTTTGGATTGGCTAGAGTTGCTTTTAGTGACACCCCAACTACAATATTTTGGACGGACTATGTTGCTACTAGATGGTATAGGGCTCCAGAGCTATGTGGTTCTTTCTTCTCCAAGTATACTCCTGCCATTGACATTTGGAGTATTGGCTGCATATTTGCTGAAGTACTGACCGGGAAACCACTTTTTCCTGGTAAAAATATTGTTCATCAGCTTGATTTGATGACAGATCTCCTTGGAACACCGTCATTGGATACCATTTCTCGGGTAAGAAATGAAAAGGCCAGGAGGTACTTAACTAGTATGAGGAAGAAGCAGCCCATACCCTTTTCTCAGAAGTTCCCTAATGCTGATCCTCTAGCCCTGCAATTGCTACAACGATTGCTTGCATTTGATCCAAAGGATCGACCTACTGCTGAAGAGGCTTTGGCAGATCCTTACTTTAATGGGCTGGCAAAAGTTGAGAGGGAACCTTCTTGCCAGCCAATCTCAAAGGTGGAGTTTGAATTTGAAAGGAGAAAAGTCACAAAGGATGACATTCGCGAGCTAATATTCCTTGAGATACTAGAATACCATCCTCAACTGCTAAAAGACTACTTAAATGGAACTGAGAGATCAAATTTTCTTTATCCAAGTGCACTAGATCAGTTTAAAAAGCAATTTGCTCATCTTGAAGATAATGGAGGGAAAAGTGGACCAGTTTATCCTTTAGAAAGAAAACATGCATCTCTTCCTAGGTCTTCAGTACAGTCAAATACCATTCCTCCTAAAGCTACATCAAATATTGTTTCCTTTAAAGACCGATATGCGCCAGCAGGTTCGTTTAGCAGTCAGCATTTCAGAGATCCAGCAGCGCAGAGGATTGCTGCTGCTCAAGCCAAGCCTGGAAGAATCTCGGGCCCGGTCGTGCCATATGACAGTGGAAGTATTGTTAAAGATGCCTACGACCCGAGAATGTTAATTAGAAGTGCCCTCCCTTCTCATGCTATCCATCCAACATATTATTATCAGCAATCTTGCGGCCAAAATGAAGAAAGATCAGCAACGGGGGCTGAACTGGACACATCCTTGCAATGTAAACAATCCCCTCAATGTGGAATGGCTGCCAAATTAGCAGGAGATACAGCTGCTACTGGTGCTTTCTCAAATCCTTTCTTTATGGCGCGTGTAGGCATGCCCAAGATCGGAAACAATGACCGTGCTGCACGTTTGCAGGTAAGCGCTCAATATGATGCTGGAGCTGTTGCTGCTGCAACTACCACCACCCATCGAAACACTGGCACGGTCGAAATTCAGACTTTGAAACTCACAATCATCATATTGGCCATTGAAGAGGAAGCTGAGCTTATTGATGGATAG 1863 42.24 MQTHHRKKNSAELDFFSEYGDANRFKVREVIGKGSYGVVCSAVDTLTNEKVAIKKIHDIFEHVSDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRGFKDIFVVFELMESDLHQVIKANDDLTKEHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFSDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNIVHQLDLMTDLLGTPSLDTISRVRNEKARRYLTSMRKKQPIPFSQKFPNADPLALQLLQRLLAFDPKDRPTAEEALADPYFNGLAKVEREPSCQPISKVEFEFERRKVTKDDIRELIFLEILEYHPQLLKDYLNGTERSNFLYPSALDQFKKQFAHLEDNGGKSGPVYPLERKHASLPRSSVQSNTIPPKATSNIVSFKDRYAPAGSFSSQHFRDPAAQRIAAAQAKPGRISGPVVPYDSGSIVKDAYDPRMLIRSALPSHAIHPTYYYQQSCGQNEERSATGAELDTSLQCKQSPQCGMAAKLAGDTAATGAFSNPFFMARVGMPKIGNNDRAARLQVSAQYDAGAVAAATTTTHRNTGTVEIQTLKLTIIILAIEEEAELIDG 620
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 40244236 40248286 - CePI673135_09g023390.1 Cec09g2339 212849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g2339 620 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec09g2339 620 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524(InterPro)
Cec09g2339 620 Pfam Protein kinase domain 26 316 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec09g2339 620 SUPERFAMILY Protein kinase-like (PK-like) 22 320 IPR011009 -
Cec09g2339 620 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec09g2339 620 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Cec09g2339 620 Gene3D Phosphorylase Kinase; domain 1 40 362 - -
Cec09g2339 620 FunFam Mitogen-activated protein kinase 17 118 - -
Cec09g2339 620 FunFam Mitogen-activated protein kinase 111 339 - -
Cec09g2339 620 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 24 355 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Cec09g2339 620 SMART serkin_6 25 316 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec09g2339 620 CDD STKc_TDY_MAPK 24 361 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec06g1641 Cec-Chr6:30022023 Cec09g2339 Cec-Chr9:40244236 8.60E-198 dispersed
Cec07g0713 Cec-Chr7:13395452 Cec09g2339 Cec-Chr9:40244236 5.50E-183 dispersed
Cec07g1131 Cec-Chr7:26556051 Cec09g2339 Cec-Chr9:40244236 7.80E-204 dispersed
Cec08g1526 Cec-Chr8:26958400 Cec09g2339 Cec-Chr9:40244236 4.00E-88 dispersed
Cec09g2339 Cec-Chr9:40244236 Cec10g0114 Cec-Chr10:1058275 1.60E-44 dispersed
Cec02g1924 Cec-Chr2:37076918 Cec09g2339 Cec-Chr9:40244236 7.50E-249 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72289 PF00069 Pkinase 1.00E-66 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g2339 - - - 0.0