Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec09g2349 | ATGTCGAAATCAAAGAAGGCTTCGACGACCACCCCAAATTCTTCAGTGTCGTCGTCGTCTAATGAAGCTGTAGTTGAAGAAGATTCAGTCAAGAGCAACAAAGAGGACATAAAAGGGTGCGAGAATAAAGATGAAGAAAAGTCTAAGAAACAGAACAACATAACAAAAAAGAAAGAGAAACGGCAGAGGGAGCCCCGTTTTGCTTTCTTGACTAAGAGTGAGATTGATCACCTTGAAGATGGTTATAGATGGAGAAAATATGGTCAGAAAGCAGTTAAAAATAGTCCTTACCCCAGAAGCTACTATAGATGCACCAGCCAAAAATGTGTAGTGAAAAAACGAGTTGAAAGATCATATCAAGATCCATCTGTAGTGATTACTACATATGAAGGCCAACACAACCACCATTGTCCAGCTACACTCCGAGGCCATTCTGCAGGGATCATGTCGTCTCCGTTCTATGCATCAGCATCAACATCGGTAACGGCAGCCTCGTCGGGGCCTACGCTTCCACAAGAACTTTTCTCACATTTGTTACCGACAAATAACTGCCAAACCGACCCGGCCTCGATGATGTACCAAAATCTAAGCCTTCAACAACACCTTCAAATGCCTGATCATTATGGTTTGTTGCAAGATTTGTTCACTCAAAAATAG | 657 | 42.31 | MSKSKKASTTTPNSSVSSSSNEAVVEEDSVKSNKEDIKGCENKDEEKSKKQNNITKKKEKRQREPRFAFLTKSEIDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTSQKCVVKKRVERSYQDPSVVITTYEGQHNHHCPATLRGHSAGIMSSPFYASASTSVTAASSGPTLPQELFSHLLPTNNCQTDPASMMYQNLSLQQHLQMPDHYGLLQDLFTQK | 218 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 40316282 | 40317866 | + | CePI673135_09g023490.1 | Cec09g2349 | 212859 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec09g2349 | 218 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
Cec09g2349 | 218 | Coils | Coil | 40 | 60 | - | - | |
Cec09g2349 | 218 | SUPERFAMILY | WRKY DNA-binding domain | 71 | 138 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cec09g2349 | 218 | MobiDBLite | consensus disorder prediction | 1 | 65 | - | - | |
Cec09g2349 | 218 | ProSiteProfiles | WRKY domain profile. | 73 | 138 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cec09g2349 | 218 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 11 | 146 | IPR044810 | GO:0003700(InterPro) | |
Cec09g2349 | 218 | Pfam | WRKY DNA -binding domain | 79 | 136 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cec09g2349 | 218 | SMART | WRKY_cls | 78 | 137 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cec09g2349 | 218 | Gene3D | WRKY domain | 63 | 139 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cec09g2349 | 218 | MobiDBLite | consensus disorder prediction | 27 | 65 | - | - | |
Cec09g2349 | 218 | FunFam | WRKY transcription factor 57 | 64 | 138 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec04g2139 | Cec-Chr4:39244737 | Cec09g2349 | Cec-Chr9:40316282 | 2.60E-41 | dispersed | |
Cec06g0447 | Cec-Chr6:5039065 | Cec09g2349 | Cec-Chr9:40316282 | 3.50E-35 | dispersed | |
Cec08g1058 | Cec-Chr8:22466291 | Cec09g2349 | Cec-Chr9:40316282 | 8.30E-36 | dispersed | |
Cec09g0495 | Cec-Chr9:4236269 | Cec09g2349 | Cec-Chr9:40316282 | 9.10E-32 | dispersed | |
Cec09g2349 | Cec-Chr9:40316282 | Cec10g1167 | Cec-Chr10:25499238 | 5.80E-34 | dispersed | |
Cec10g1159 | Cec-Chr10:25359492 | Cec09g2349 | Cec-Chr9:40316282 | 8.50E-14 | dispersed | |
Cec02g1926 | Cec-Chr2:37122354 | Cec09g2349 | Cec-Chr9:40316282 | 8.60E-44 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
30294 | PF03106 | WRKY | 3.30E-25 | CL0274 | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec09g2349 | - | - | - | 0.0 |