Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g2350 ATGTCATCTGGAAGTAGTAGTACTTTGAATACAGAATTGTCAAAGAAAACACCCTTCCTTGGTTTGTCCCTATGGGTTTTGATCTGCTTATGTGTTGGTGCATTTATTGTATTAATTCTCGGTATCTTATCTGTATGGGTGATGTTTAGAAGAAAAACAAGGAGATCCCCAGAAAATTTCTCTATTTCTCAAATACCAAATGTCTCGAAGGATATTAAGGTGGACAGAATCGCGACTCAATCTGCCCACCACAATCATCTCGAGAACCTTTATCTTTCCATTCATGATAAATCAAGTGAGAAGAACTCAGAGAAGATGATTGGTCATTTGGGTATGAGCAAGTCTAGTGATCCTGATAACATAAGCCAATGCAGCTCCAATTATCATCATGAAAGAGTTTTCAGCTCGCATTCAGGAGAAGAAGGAAGCTCTGGGACTGTTAGAAAGCAGTCTTCCATGTCATATGGAGGGTATGGAGGCCTTGTGACTGCCTCTCCTCTTGTTGGCCTGCCTGAAATTTCGCATCTTGGTTGGGGTCATTGGTTTACACTCAGGGATCTAGAATTTGCGACAAATCGTTTCGCTGCAGACAATGTGCTTGGGGAAGGGGGTTATGGGGTCGTCTACAAAGGCAGACTGATAAATGGAACTGAGGTTGCAGTGAAGAAACTGCTCAATAATCTGGGACAAGCAGAGAAAGAATTTAGAGTTGAAGTGGAGGCCATCGGTCATGTAAGACACAAGAACCTTGTACGGCTCCTCGGCTATTGCATAGAAGGAGTTCATAGGATGCTGGTCTATGAATATGTGAACAATGGGAACTTAGAGCAGTGGTTACATGGGGCTATGCGGCAACATGGCACCCTTACTTGGGAGGCTCGAATGAAGGTGCTTCTTGGCACTGCCAAGGCGCTAGCATATTTACATGAAGCAATTGAACCAAAGGTTGTCCACAGAGACATAAAATCGAGCAACATCTTAATCGATGATGAATTTAATGCAAAGGTTTCAGATTTTGGATTGGCCAAGCTTTTGGATGCAGGAGAGAGTCACATCACGACTAGAGTGATGGGAACATTTGGGTATGTGGCGCCAGAATATGCCAACACTGGCTTGTTAAACGAGAAGAGTGACATTTATAGCTTTGGTGTTCTCCTTCTAGAAGCAATTACGGGAAGGGACCCAGTGGACTATGGTCGTCCTGCTAATGAGGTTAATCTTGTTGAGTGGTTAAAAGTGATGGTTGGCACAAGGAGAGCTGAGGAAGTTATTGACCCAAGTCTTGAAACTAAACCCGCTACACGAGCATTGAAACGTGCCCTTCTGATTGCACTTAGGTGTGTGGATCCTGAGGCAGATAAGAGACCAAAAATGACCCAAGTTGTTAGGATGCTTGAAGCTGATGACTACCCATCACGTGAGGATCGTCGGAGCCAGAAGAGCAGCACAGCAAACTCAGAGATCGAATCCAGTCAAGGCGAGGTCGGAAGTAAACCAGCGCTAGCACGGAGTAGAAAGCTTTTAAGAGGGTTGAAATTGGCTTGGAGAATTTTTTCCAATGTGAAGAATGAGGAATTGGATGACTGA 1587 44.05 MSSGSSSTLNTELSKKTPFLGLSLWVLICLCVGAFIVLILGILSVWVMFRRKTRRSPENFSISQIPNVSKDIKVDRIATQSAHHNHLENLYLSIHDKSSEKNSEKMIGHLGMSKSSDPDNISQCSSNYHHERVFSSHSGEEGSSGTVRKQSSMSYGGYGGLVTASPLVGLPEISHLGWGHWFTLRDLEFATNRFAADNVLGEGGYGVVYKGRLINGTEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRQHGTLTWEARMKVLLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDAGESHITTRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLEAITGRDPVDYGRPANEVNLVEWLKVMVGTRRAEEVIDPSLETKPATRALKRALLIALRCVDPEADKRPKMTQVVRMLEADDYPSREDRRSQKSSTANSEIESSQGEVGSKPALARSRKLLRGLKLAWRIFSNVKNEELDD 528
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 40323737 40326897 - CePI673135_09g023500.1 Cec09g2350 212860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g2350 528 Gene3D Transferase(Phosphotransferase) domain 1 270 484 - -
Cec09g2350 528 ProSitePatterns Protein kinases ATP-binding region signature. 200 223 IPR017441 GO:0005524(InterPro)
Cec09g2350 528 FunFam Putative receptor-like protein kinase 176 269 - -
Cec09g2350 528 CDD STKc_IRAK 200 466 - -
Cec09g2350 528 SUPERFAMILY Protein kinase-like (PK-like) 178 471 IPR011009 -
Cec09g2350 528 Gene3D Phosphorylase Kinase; domain 1 176 269 - -
Cec09g2350 528 Coils Coil 214 234 - -
Cec09g2350 528 MobiDBLite consensus disorder prediction 469 500 - -
Cec09g2350 528 ProSitePatterns Serine/Threonine protein kinases active-site signature. 316 328 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec09g2350 528 PANTHER OS01G0323000 PROTEIN 7 488 IPR052232 -
Cec09g2350 528 FunFam Putative receptor-like serine/threonine-protein kinase 270 480 - -
Cec09g2350 528 Pfam Protein kinase domain 197 463 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec09g2350 528 ProSiteProfiles Protein kinase domain profile. 194 452 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec09g2350 528 SMART serkin_6 194 465 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g1552 Cec-Chr2:33137914 Cec09g2350 Cec-Chr9:40323737 1.40E-149 dispersed
Cec05g1101 Cec-Chr5:9724841 Cec09g2350 Cec-Chr9:40323737 2.90E-70 dispersed
Cec06g0424 Cec-Chr6:4794683 Cec09g2350 Cec-Chr9:40323737 1.10E-154 dispersed
Cec08g1662 Cec-Chr8:27947811 Cec09g2350 Cec-Chr9:40323737 3.00E-145 dispersed
Cec09g2350 Cec-Chr9:40323737 Cec11g0552 Cec-Chr11:6039190 8.40E-79 dispersed
Cec02g1927 Cec-Chr2:37128872 Cec09g2350 Cec-Chr9:40323737 1.10E-191 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72290 PF00069 Pkinase 7.20E-48 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g2350 - - - 0.0