Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec09g2359 | ATGGCCGCGTCAGAGATGATGATGAAAAAGGGTGGTAGTGGACCACCGCCTTGCGCTGCTTGCAAGCTTCTGCGCCGGCGGTGTGCTCCGGACTGCGTTTTTGCTCCCTATTTCCCTTCCGATCAGCCTCACAAATTCTCAAGTGTTCACAAGGTTTTTGGAGCCAGCAATGTCAGCAAATTGTTGCAGGAGTTGCCAGAGCATCAAAGGAGCGATGCTGTGAGTTCATTGGTATACGAGGCAAATGCAAGGATTCGAGATCCGGTATACGGATGCGTGGGAACGATATCGTGTCTACAACAGGAAGTAGATACGTTGCAACAACAACTAGCAATGACACAGGCCCAGCTAGTTCAATTGAAAATGGGCCAATTTGCATCAACATCACAAGCATCATCTAGTAGGGATGACCTCCTTCCTCCTCCGCCCAATATCAATGTGGGCGCATCACCATCCTTGTGGTCTTGCTAG | 471 | 49.89 | MAASEMMMKKGGSGPPPCAACKLLRRRCAPDCVFAPYFPSDQPHKFSSVHKVFGASNVSKLLQELPEHQRSDAVSSLVYEANARIRDPVYGCVGTISCLQQEVDTLQQQLAMTQAQLVQLKMGQFASTSQASSSRDDLLPPPPNINVGASPSLWSC | 156 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 40416421 | 40418653 | + | CePI673135_09g023590.1 | Cec09g2359 | 212869 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec09g2359 | 156 | Pfam | Lateral organ boundaries (LOB) domain | 17 | 114 | IPR004883 | - | |
Cec09g2359 | 156 | Coils | Coil | 96 | 116 | - | - | |
Cec09g2359 | 156 | ProSiteProfiles | LOB domain profile. | 16 | 117 | IPR004883 | - | |
Cec09g2359 | 156 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 17 | 126 | - | - | |
Cec09g2359 | 156 | MobiDBLite | consensus disorder prediction | 131 | 156 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec02g2031 | Cec-Chr2:38077549 | Cec09g2359 | Cec-Chr9:40416421 | 1.40E-37 | dispersed | |
Cec07g0514 | Cec-Chr7:5931469 | Cec09g2359 | Cec-Chr9:40416421 | 4.50E-39 | dispersed | |
Cec09g2359 | Cec-Chr9:40416421 | Cec10g1403 | Cec-Chr10:28374804 | 2.90E-35 | dispersed | |
Cec02g1940 | Cec-Chr2:37289655 | Cec09g2359 | Cec-Chr9:40416421 | 6.80E-46 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
30296 | PF03195 | LOB | 7.20E-44 | No_clan | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec09g2359 | - | - | - | 0.0 |