Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec09g2363 | ATGGCGTCTTCGTCTTTAGGTTTCATCTTTGTTCTTTGTGCTATTGCTTCCATCGTCGCCCACCTGATTGTTTTGTCTCAAGCTCAGAATTCAACTCTACCCCCCACCGATCCTGATCAAGCAAGAGCTCTGAATTCCATATTTCGACAATGGCGTATATCGGCTCCATCAGGGGCGTGGAATATAAGCGGGAATCTGTGCAGTGGGAGAGCTGTCGACACTACAACCCCCATCGATAGTAATGGAAACCTCAATCCTCTTATAAAATGTGATTGCTCAGCCAACAATGGTGCTACTTGCCTCATTACTCAACTGCACGTTTATGCGATAAATGTTGTTGGTGTACTCCCACCAGAGCTCTGGACATTAACTTCCCTCACCTATCTGAAGCTGGATCAAAATTTCTTGACAGGAACATTATCTGCATCTGTTGGCAATCTCACAGAATTGCGAACCTTGAGCCTGGGCATTAATGCATTATCAGGGGAACTTCCGAAGGAACTTGGATCTCTTTCTAAACTAGAAGTATTGGCATTCGGGTCCAACAATTTCTCTGGTCCCTTACCGTCAGAGCTTGGAAATCTTTCTATGTTAAGGGAGCTATACATTGATAGCTCTGGAGTTTCTGGTGGTATTCCTCCATCATTTTCAAGTCTGAGAAACTTGCAGACAGTATGGGCATCAGACAATGAATTCACTGGCAGAATACCTGATTTCATCGGGAGTTGGACAAGGCTCACATCTCTGAGGTTTCAAGGAAACTCTTTTACAGGTCCTATACCATCGACGTTTTCAAACTTGACATCTCTGACTGAGTTGAGAATAGGTGATTTATCCAATGGGAGCTCTTCTCTGGCATTCGTCAGTAATATGACATCTCTAACTATCCTGGTGTTGAGAAATAATAATATGACTGGTTCAATTCCATCCAATATTGGAGGATTTCGTAGACTTACCCAGCTGGACTTGAGCTTCAACAACTTGACAGGAGAGATTCCAAGCCCGCTTTTCAGTTTGAGTTCACTGTCACACTTGATTCTTGGAAATAATAAGTTAAATGGGACCCTACCTACACAGAAGAGTGCATCACTTCTAAATATAGACTTGTCATATAACGATTTATCAGGGAGCTTTCCTGCTTGGATCAACGAGCAAAACTTACAACTAAATTTAGTCGCCAACAATTTCACAATTGACAGTGCTAGTATCAGTGGTTTGCCTTCTGGATTGAATTGTCTTCAACGCCACTTTCCTTGTAATCGAGGTCGTCCAATATATTCTGATTTTGGGATCAAGTGTGGAGGTCCACAGATCAGAAGTTCATCAGGGATTTTGTTTGAAAGAGAAAATGAGACTCTCGGTCCTGCTACGTACTTTGTTACTGAGTCACAAAGGTGGGCCGTTAGTAATACTGGATACTTTACTGGGACCAACGATCCTCAATACACAGCCAATACGTTGTCTCAATTCCCAAACACCCTTGACACAGAACTTTTTCAGACACAGCGACTATCTGCTTCATCATTGAGATACTATGGACTAGGGCTTGAGAATGGCAACTACACTGTGAACCTTCATTTTGCAGAGCTAGCTTTCCCAGATTCAAATACATGGCAAAGCCGTGGGAGGCGTCTCTTTGATATATATATACAGGGAAATCGTGTGTTACAGAATTTTGATATTAGAAAGGAGGCAGGTGGGTCTTTCCTTGCTGTCAGAAAGAATTTTACGGCTGAAGTTACAGAAAACTTCCTGGAAATTCATCTCTTTTGGGCGGGGAAAGGTACTTGCTGCATACCTAAACAGGGTGATTTTGGACCCGCTGTTTCAGCCATCAGTGCTACCCCAGATTTTGTACCAACTGTCAGTAATGTTCCTCCAATTACTAAGGAGAATAGAACAGGCCTAATCGTAGGGCTCGTTGTTGGTTTAGGATCTGTTTTCTTTCTGATTATTGGCGCAGTTTTCCTTGTTGTTCAGAGAAGGAAAAGGCGTCGCGCCTATGAAGATGAAGAGCTCCTAGGAATAGACACTAGACCGTACACTTTTAGTTTTTCTGAATTAAGGAGTGCTACAAGTGACTTTAATTCATCCAACAAACTTGGCGAGGGAGGATTTGGACCTGTTTACAAGGGAACATTAAGTGATGGAAGAGTGGTTGCTGTGAAGCAACTTTCAGTGGCATCCCACCAAGGAAAGAGCCAGTTTGTTGCTGAGATTGCTACAATATCTGCAGTGCAACATCGTAACCTTGTGAAATTATATGGATGTTGCATTGAGGCCGATAAACGTCTCCTTGTTTATGAGTTTCTTGAAAACAAGAGTCTTGACCAAGCATTATTTGGACAAAAACATTTGATTATTGATTGGCCAACACGTTTTGAGATATGCGTGGGTGTAGCAAGGGGCCTCACTTACCTTCATGAGGAATCGAGACTTCGCATAGTGCACAGAGATGTTAAGGCCAGTAACATCCTGCTTGATGGTAATCTGATTCCCAAAATTTCAGATTTTGGCTTAGCCAAACTTTATGATGACAAAAAGACTCATATAAGCACCCGTGTTGCTGGGACAATTGGTTATCTTGCACCTGAGTATGCCATGCGTGGCCACCTTACGGAGAAGGCTGATGTCTTTGGATTTGGCGTTGTGGCTCTTGAAATTGTTAGTGGAAGGCCAAATTCAGACCCAAGCTTAGAGCAAGACAAAGTATATCTTCTCGAATGGGCATGGTACCTCCACGAAAACAACTGTGAACTTGAGATGGTGGATTCTGAATTATCAGAGTTCAGTAAGGAGGAAGTAAAAAGGGTGATCGGTGTAGCTCTTCTGTGTACTCAAACATCTCCAGCTCTTCGGCCATCGATGTCCCGTGTGGTGGCAATGCTGACTGGAGACATTGAAGTGGCCGCTGTAACTTCCAAACCAGGATACCTGACAGATTGGAAATTTGATGACATTACAAGCTTTATAGATACTCCATCAACTGAAGAACCTGATACTGGCCGTTATGCATCGCCAAGTTCGAGTATCGTTGATACACATCGCTCACCAGCCAATGCTTCTGAACCAATGCTTCGTGGATTATTAGGAGAGGGTAGGTGA | 3105 | 43.09 | MASSSLGFIFVLCAIASIVAHLIVLSQAQNSTLPPTDPDQARALNSIFRQWRISAPSGAWNISGNLCSGRAVDTTTPIDSNGNLNPLIKCDCSANNGATCLITQLHVYAINVVGVLPPELWTLTSLTYLKLDQNFLTGTLSASVGNLTELRTLSLGINALSGELPKELGSLSKLEVLAFGSNNFSGPLPSELGNLSMLRELYIDSSGVSGGIPPSFSSLRNLQTVWASDNEFTGRIPDFIGSWTRLTSLRFQGNSFTGPIPSTFSNLTSLTELRIGDLSNGSSSLAFVSNMTSLTILVLRNNNMTGSIPSNIGGFRRLTQLDLSFNNLTGEIPSPLFSLSSLSHLILGNNKLNGTLPTQKSASLLNIDLSYNDLSGSFPAWINEQNLQLNLVANNFTIDSASISGLPSGLNCLQRHFPCNRGRPIYSDFGIKCGGPQIRSSSGILFERENETLGPATYFVTESQRWAVSNTGYFTGTNDPQYTANTLSQFPNTLDTELFQTQRLSASSLRYYGLGLENGNYTVNLHFAELAFPDSNTWQSRGRRLFDIYIQGNRVLQNFDIRKEAGGSFLAVRKNFTAEVTENFLEIHLFWAGKGTCCIPKQGDFGPAVSAISATPDFVPTVSNVPPITKENRTGLIVGLVVGLGSVFFLIIGAVFLVVQRRKRRRAYEDEELLGIDTRPYTFSFSELRSATSDFNSSNKLGEGGFGPVYKGTLSDGRVVAVKQLSVASHQGKSQFVAEIATISAVQHRNLVKLYGCCIEADKRLLVYEFLENKSLDQALFGQKHLIIDWPTRFEICVGVARGLTYLHEESRLRIVHRDVKASNILLDGNLIPKISDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKADVFGFGVVALEIVSGRPNSDPSLEQDKVYLLEWAWYLHENNCELEMVDSELSEFSKEEVKRVIGVALLCTQTSPALRPSMSRVVAMLTGDIEVAAVTSKPGYLTDWKFDDITSFIDTPSTEEPDTGRYASPSSSIVDTHRSPANASEPMLRGLLGEGR | 1034 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 40450966 | 40460344 | - | CePI673135_09g023630.1 | Cec09g2363 | 212873 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec09g2363 | 1034 | MobiDBLite | consensus disorder prediction | 993 | 1017 | - | - | |
Cec09g2363 | 1034 | SMART | serkin_6 | 695 | 963 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec09g2363 | 1034 | Gene3D | Phosphorylase Kinase; domain 1 | 656 | 770 | - | - | |
Cec09g2363 | 1034 | Gene3D | Ribonuclease Inhibitor | 59 | 280 | IPR032675 | - | |
Cec09g2363 | 1034 | Gene3D | Ribonuclease Inhibitor | 281 | 416 | IPR032675 | - | |
Cec09g2363 | 1034 | FunFam | Leucine-rich repeat receptor-like protein kinase | 664 | 770 | - | - | |
Cec09g2363 | 1034 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 815 | 827 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec09g2363 | 1034 | MobiDBLite | consensus disorder prediction | 993 | 1034 | - | - | |
Cec09g2363 | 1034 | FunFam | Putative LRR receptor-like serine/threonine-protein kinase | 281 | 404 | - | - | |
Cec09g2363 | 1034 | CDD | STKc_IRAK | 701 | 965 | - | - | |
Cec09g2363 | 1034 | Pfam | Leucine Rich Repeat | 245 | 267 | IPR001611 | GO:0005515(InterPro) | |
Cec09g2363 | 1034 | Pfam | Leucine Rich Repeat | 293 | 314 | IPR001611 | GO:0005515(InterPro) | |
Cec09g2363 | 1034 | Pfam | Leucine Rich Repeat | 173 | 195 | IPR001611 | GO:0005515(InterPro) | |
Cec09g2363 | 1034 | Pfam | Leucine Rich Repeat | 317 | 339 | IPR001611 | GO:0005515(InterPro) | |
Cec09g2363 | 1034 | ProSiteProfiles | Protein kinase domain profile. | 695 | 969 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec09g2363 | 1034 | Pfam | Malectin domain | 430 | 612 | IPR021720 | - | |
Cec09g2363 | 1034 | Gene3D | - | 429 | 616 | - | - | |
Cec09g2363 | 1034 | FunFam | Leucine-rich repeat receptor-like protein kinase | 426 | 616 | - | - | |
Cec09g2363 | 1034 | SUPERFAMILY | Protein kinase-like (PK-like) | 678 | 997 | IPR011009 | - | |
Cec09g2363 | 1034 | FunFam | Os05g0263100 protein | 41 | 280 | - | - | |
Cec09g2363 | 1034 | Gene3D | Transferase(Phosphotransferase) domain 1 | 771 | 974 | - | - | |
Cec09g2363 | 1034 | Pfam | Protein tyrosine and serine/threonine kinase | 698 | 962 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec09g2363 | 1034 | FunFam | Putative LRR receptor-like serine/threonine-protein kinase | 771 | 975 | - | - | |
Cec09g2363 | 1034 | SUPERFAMILY | L domain-like | 102 | 408 | - | - | |
Cec09g2363 | 1034 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED | 20 | 989 | IPR051824 | GO:0005886(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec06g1593 | Cec-Chr6:29509108 | Cec09g2363 | Cec-Chr9:40450966 | 5.20E-89 | dispersed | |
Cec09g2363 | Cec-Chr9:40450966 | Cec11g0058 | Cec-Chr11:733511 | 2.50E-228 | dispersed | |
Cec11g0062 | Cec-Chr11:767788 | Cec09g2363 | Cec-Chr9:40450966 | 2.20E-24 | dispersed | |
Cec09g2363 | Cec-Chr9:40450966 | Cec11g1781 | Cec-Chr11:32008008 | 2.00E-148 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
72291 | PF07714 | PK_Tyr_Ser-Thr | 1.00E-45 | CL0016 | Cec | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec09g2363 | - | - | - | 0.0 |