Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec09g2389 | ATGTTCCATCCTAAGAAAGCTTCGACTATGAATTCTCACGAGAGAGGGATGTGCGTTCAAGGCGACTCCGGTCTCGTCCTCACCACCGACCCCAAGCCCCGCCTTCGCTGGACTGTTGAGCTTCATGAGCGCTTTGTCGATGCTGTCACTCAGCTCGGAGGCCCTGATAAGGCTACACCAAAGACCATCATGAGAGTTATGGGTGTAAAGGGTCTTACACTTTACCACCTCAAGAGCCATCTCCAGAAATTTAGATTGGGAAAGCAGCCTCACAAGGAATTCAATGATCATTCAATTAAGGATGGTATGAGAGCCTCAGGTTTAGAACTTCATCGAAACACGGCTTCTTCATCCAATATGATCAACCGCACCATGAATGAGATGCAAATGGAGGTGCAGAGAAGATTGCATGAGCAACTAGAGGTGCAAAGACACTTGCAGTTGCGGATCGAGGCACAAGGGAAGTATATGCAGAGTATATTAGAAAAGGCTTGTCAAACCCTAGCGGGTGAAAACATGGCAGCTTCCGGCGGCTACAAGGCCATGGGGGGCATCCCAAATAATAATAATAATCAGCAAGGCATTAGCGACATGGCCGGAGCCGGAGGGATCAAAGATTTTGGCTCCCCTCTCGGCTTCCCTTCTTTTCAAGACCTGAACCTCTATGGAGGCGACCACCTTGATCTTCAGCAAAACGTGGATGGATTCATGCCTCACAACGACAGTTTACTGTGCTTGGGAAAGAAGAAGCCGAGGCCCCCGCCATCTACGCCAAACTACGGTGCCAGCTCGGGAAAAGGTGCATTGGACTGGCCGGACGATCTCCGGCTGCAAGATATAGGAATGGCACCGCCGTCCTGCGTGGGCCAGCAAGAAGATGATTTCAAAGGCATTGGTGGGACGCTGGTGGAAAGAGATCATTTGGAGGAAATGTATGAGGCAAAGCCAGTAGTGTCGGATGAAGGCATTGGGGATCACAAGAAGTATGACATCAATAATAATGATAATAATAACAACAACAATAATAATAATAATGCGTCCATAAAGCTTCAGAGGCCGTCCCCCAGAAGGACACCCCTTTCCATGGATAGGGCCAACCACCCTCTTACCACTGCTCCTCAGTCCACACATTCACCTTTTGGTTAA | 1146 | 49.04 | MFHPKKASTMNSHERGMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNDHSIKDGMRASGLELHRNTASSSNMINRTMNEMQMEVQRRLHEQLEVQRHLQLRIEAQGKYMQSILEKACQTLAGENMAASGGYKAMGGIPNNNNNQQGISDMAGAGGIKDFGSPLGFPSFQDLNLYGGDHLDLQQNVDGFMPHNDSLLCLGKKKPRPPPSTPNYGASSGKGALDWPDDLRLQDIGMAPPSCVGQQEDDFKGIGGTLVERDHLEEMYEAKPVVSDEGIGDHKKYDINNNDNNNNNNNNNNASIKLQRPSPRRTPLSMDRANHPLTTAPQSTHSPFG | 381 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 40654358 | 40656400 | + | CePI673135_09g023890.1 | Cec09g2389 | 212899 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec09g2389 | 381 | MobiDBLite | consensus disorder prediction | 364 | 381 | - | - | |
Cec09g2389 | 381 | Gene3D | - | 31 | 89 | - | - | |
Cec09g2389 | 381 | MobiDBLite | consensus disorder prediction | 314 | 332 | - | - | |
Cec09g2389 | 381 | MobiDBLite | consensus disorder prediction | 333 | 354 | - | - | |
Cec09g2389 | 381 | FunFam | Myb family transcription factor | 31 | 89 | - | - | |
Cec09g2389 | 381 | MobiDBLite | consensus disorder prediction | 314 | 381 | - | - | |
Cec09g2389 | 381 | SUPERFAMILY | Homeodomain-like | 31 | 87 | IPR009057 | - | |
Cec09g2389 | 381 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR PHL11 | 8 | 189 | IPR046955 | GO:0003700(InterPro) | |
Cec09g2389 | 381 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 29 | 89 | IPR017930 | - | |
Cec09g2389 | 381 | Pfam | Myb-like DNA-binding domain | 34 | 84 | IPR001005 | - | |
Cec09g2389 | 381 | Pfam | MYB-CC type transfactor, LHEQLE motif | 127 | 167 | IPR025756 | - | |
Cec09g2389 | 381 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 32 | 87 | IPR006447 | GO:0003677(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec05g0383 | Cec-Chr5:3124482 | Cec09g2389 | Cec-Chr9:40654358 | 3.00E-39 | dispersed | |
Cec07g0267 | Cec-Chr7:2622870 | Cec09g2389 | Cec-Chr9:40654358 | 7.20E-31 | dispersed | |
Cec09g2389 | Cec-Chr9:40654358 | Cec10g1341 | Cec-Chr10:27656736 | 7.70E-34 | dispersed | |
Cec02g1969 | Cec-Chr2:37533770 | Cec09g2389 | Cec-Chr9:40654358 | 8.30E-86 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
30298 | PF00249 | Myb_DNA-binding | 2.10E-06 | CL0123 | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec09g2389 | - | - | - | 0.0 |