Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cec10g0010 | GTGTTTATGCCACATCGAGTATTTCTTCTTCGTGGAAACCACGAGTCCAAGTACTGCACATCCGTTTATGGTTTTGAGAAGGAGGTGCTAACCAAGTACGGAGACAAGGGTAAGCATGTCTATCGGAAGTGTTTGGGGTGTTTCGAAGGGCTGCCTTTGGCCTCCATTATTGCTGGATGTGTATATACGGCTCATGGAGGACTTTTCCGCAGCATATCAGTTCCTTCGTCTAAAAGGTTGAAAGGGAAAAAAAATCGTAGGATAATCTTAAATCCCGAAGCCAACGGGTTATCTCTTGGTTCTTTGGAGGAACTATCCAAAGCCAGAAGATCGGTTCTTGATCCCCCATGGGAAGGCTTGAATTTAATTCCGGGCGATGTGTTGTGGTCTGATCCCTCGATGAATCCTGGTCTCTCCCCAAATAAAGATAGAGGCATAGGTCTCTTGTGGGGTCCTGATTGCACTGAAGAATTCTTGAAAAAATTCAATCTGAAGCTAATTATTAGATCCCATGAAGGTCCTGATGCTAGAGAAAAGAGACCCGGTCTTGCAGGAATGGATCAGGGTTACACGATAGATCATGTTGTAGATTCAGGGAAACTGATTACTTTGTTTAGTGCTCCAGACTATCCACAATTTCAGGCAACTGAGGAGAGATACAAAAACAAAGGTGCATATATTGTTCTAGAACCTCCGAATTTTGATGTTCCAATCATTCATAGTTTTGATGCCATTACTCCACGACCAAAGGTCATTGCATATTACGATTTTGAGGATGTAATTGATTCTGACGAAGAATTAGACTTGGCTTCAATGGCAACTGATCCATGA | 831 | 42.72 | VFMPHRVFLLRGNHESKYCTSVYGFEKEVLTKYGDKGKHVYRKCLGCFEGLPLASIIAGCVYTAHGGLFRSISVPSSKRLKGKKNRRIILNPEANGLSLGSLEELSKARRSVLDPPWEGLNLIPGDVLWSDPSMNPGLSPNKDRGIGLLWGPDCTEEFLKKFNLKLIIRSHEGPDAREKRPGLAGMDQGYTIDHVVDSGKLITLFSAPDYPQFQATEERYKNKGAYIVLEPPNFDVPIIHSFDAITPRPKVIAYYDFEDVIDSDEELDLASMATDP | 276 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 179252 | 189768 | - | CePI673135_10g000100.1 | Cec10g0010 | 212925 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cec10g0010 | 276 | SMART | pp2a_7 | 1 | 246 | IPR006186 | GO:0016787(InterPro) | |
| Cec10g0010 | 276 | PRINTS | Serine/threonine phosphatase family signature | 106 | 133 | IPR006186 | GO:0016787(InterPro) | |
| Cec10g0010 | 276 | PRINTS | Serine/threonine phosphatase family signature | 9 | 33 | IPR006186 | GO:0016787(InterPro) | |
| Cec10g0010 | 276 | PRINTS | Serine/threonine phosphatase family signature | 46 | 72 | IPR006186 | GO:0016787(InterPro) | |
| Cec10g0010 | 276 | PRINTS | Serine/threonine phosphatase family signature | 200 | 216 | IPR006186 | GO:0016787(InterPro) | |
| Cec10g0010 | 276 | ProSitePatterns | Serine/threonine specific protein phosphatases signature. | 10 | 15 | IPR006186 | GO:0016787(InterPro) | |
| Cec10g0010 | 276 | Pfam | Calcineurin-like phosphoesterase | 5 | 172 | IPR004843 | GO:0016787(InterPro) | |
| Cec10g0010 | 276 | SUPERFAMILY | Metallo-dependent phosphatases | 3 | 250 | IPR029052 | - | |
| Cec10g0010 | 276 | Gene3D | - | 1 | 263 | IPR029052 | - | |
| Cec10g0010 | 276 | PANTHER | SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED | 1 | 268 | IPR051134 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cec09g2103 | Cec-Chr9:37976204 | Cec10g0010 | Cec-Chr10:179252 | 8.20E-72 | dispersed | |
| Cec10g0010 | Cec-Chr10:179252 | Cec11g1330 | Cec-Chr11:27574715 | 1.30E-14 | dispersed | |
| Cec10g0010 | Cec-Chr10:179252 | Cec09g2325 | Cec-Chr9:40145907 | 1.20E-31 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cec10g0010 | K04460 | - | csv:116402529 | 542.347 |