Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g0030 ATGAAAAAACACCCTCCTCCTTCACTGTCAAAAGCTGCAGAGTTTCCGACATCTTCTTTTTATCTCCGCCGTGATGTCCACCGCCGACCGCCGGTGAGACAGTGCCAGAGGAAACTCAGACACATCAGCTCTCCTCCACCGCAAAATCCTTACCACCATCAGAACCCTCCTCTTGGAGACGATCATCTCCATCATCTCACCGGAACTACCGCCGGCGCTCTCTACGTCAAAGTCATGACCGACGAGCAATTGGAGACTCTTCGCAAGCAAATTGCTGTTTACGCCACCATTTGCGAGCAGCTCGTTGAGATGCACAAGACTCTCACTGCTCACCAGGATCTCACAGGAATGAGGTTGGGTAATATGTACTGTGAGCCATTGATGACATCTTCCAGCCACAAAATCACTTCTAGACAGCGATGGACTCCGACACCTGTGCAACTTCAGATCTTAGAGCGTATATTTGAGCAAGGGAATGGAACTCCCAGCAAACAAAAGATCAAAGAGATAACCTCTGAACTGGGTCAGCATGGCCAAATTTCTGAATCTAATGTCTATAACTGGTTCCAAAACAGGCGTGCTCGATCGAAGAGGAAGCAGCAAAGTACAGCCCCCGCCTATGGCGAATCAGAAGTGGAGACAGAAGTCGAGTCACCGAAAGATAAGAAGACAAAACCTGTGGATTTTCAAACTCATCAATCCTCTGCACCTTTGGGGGATGACATGTGCTTCCAAAGTCCCGAGATGAGTTCTGAACTGCATTTCCTGGATCCAAACACCAACAAAGCTGATACTTTGTTTCCTTCAAATGGAAGTTTAAAAACGGCGAGAAGTTTCAGCCAGATGTCTTTTTATGAGGCAGGGAATGAGCAGCTGGCAGGAAAGATTGAAACGCCAGAGAACTATAGTCTTTACCAGCAAGCAGAAGGCTACAGCATGACTGAACGACCATGA 954 47.69 MKKHPPPSLSKAAEFPTSSFYLRRDVHRRPPVRQCQRKLRHISSPPPQNPYHHQNPPLGDDHLHHLTGTTAGALYVKVMTDEQLETLRKQIAVYATICEQLVEMHKTLTAHQDLTGMRLGNMYCEPLMTSSSHKITSRQRWTPTPVQLQILERIFEQGNGTPSKQKIKEITSELGQHGQISESNVYNWFQNRRARSKRKQQSTAPAYGESEVETEVESPKDKKTKPVDFQTHQSSAPLGDDMCFQSPEMSSELHFLDPNTNKADTLFPSNGSLKTARSFSQMSFYEAGNEQLAGKIETPENYSLYQQAEGYSMTERP 317
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 388644 392829 + CePI673135_10g000300.1 Cec10g0030 212945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g0030 317 PANTHER WUSCHEL-RELATED HOMEOBOX 13 68 314 IPR044559 GO:0003700(InterPro)
Cec10g0030 317 MobiDBLite consensus disorder prediction 36 65 - -
Cec10g0030 317 Pfam Homeodomain 138 198 IPR001356 GO:0003677(InterPro)
Cec10g0030 317 Gene3D - 140 204 - -
Cec10g0030 317 SUPERFAMILY Homeodomain-like 134 202 IPR009057 -
Cec10g0030 317 MobiDBLite consensus disorder prediction 213 228 - -
Cec10g0030 317 CDD homeodomain 138 200 IPR001356 GO:0003677(InterPro)
Cec10g0030 317 SMART HOX_1 136 203 IPR001356 GO:0003677(InterPro)
Cec10g0030 317 MobiDBLite consensus disorder prediction 196 239 - -
Cec10g0030 317 ProSiteProfiles 'Homeobox' domain profile. 134 199 IPR001356 GO:0003677(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec10g0030 Cec-Chr10:388644 Cec11g1922 Cec-Chr11:33420753 1.10E-73 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30307 PF00046 Homeodomain 1.10E-18 CL0123 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g0030 - - - 0.0