Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec10g0030 | ATGAAAAAACACCCTCCTCCTTCACTGTCAAAAGCTGCAGAGTTTCCGACATCTTCTTTTTATCTCCGCCGTGATGTCCACCGCCGACCGCCGGTGAGACAGTGCCAGAGGAAACTCAGACACATCAGCTCTCCTCCACCGCAAAATCCTTACCACCATCAGAACCCTCCTCTTGGAGACGATCATCTCCATCATCTCACCGGAACTACCGCCGGCGCTCTCTACGTCAAAGTCATGACCGACGAGCAATTGGAGACTCTTCGCAAGCAAATTGCTGTTTACGCCACCATTTGCGAGCAGCTCGTTGAGATGCACAAGACTCTCACTGCTCACCAGGATCTCACAGGAATGAGGTTGGGTAATATGTACTGTGAGCCATTGATGACATCTTCCAGCCACAAAATCACTTCTAGACAGCGATGGACTCCGACACCTGTGCAACTTCAGATCTTAGAGCGTATATTTGAGCAAGGGAATGGAACTCCCAGCAAACAAAAGATCAAAGAGATAACCTCTGAACTGGGTCAGCATGGCCAAATTTCTGAATCTAATGTCTATAACTGGTTCCAAAACAGGCGTGCTCGATCGAAGAGGAAGCAGCAAAGTACAGCCCCCGCCTATGGCGAATCAGAAGTGGAGACAGAAGTCGAGTCACCGAAAGATAAGAAGACAAAACCTGTGGATTTTCAAACTCATCAATCCTCTGCACCTTTGGGGGATGACATGTGCTTCCAAAGTCCCGAGATGAGTTCTGAACTGCATTTCCTGGATCCAAACACCAACAAAGCTGATACTTTGTTTCCTTCAAATGGAAGTTTAAAAACGGCGAGAAGTTTCAGCCAGATGTCTTTTTATGAGGCAGGGAATGAGCAGCTGGCAGGAAAGATTGAAACGCCAGAGAACTATAGTCTTTACCAGCAAGCAGAAGGCTACAGCATGACTGAACGACCATGA | 954 | 47.69 | MKKHPPPSLSKAAEFPTSSFYLRRDVHRRPPVRQCQRKLRHISSPPPQNPYHHQNPPLGDDHLHHLTGTTAGALYVKVMTDEQLETLRKQIAVYATICEQLVEMHKTLTAHQDLTGMRLGNMYCEPLMTSSSHKITSRQRWTPTPVQLQILERIFEQGNGTPSKQKIKEITSELGQHGQISESNVYNWFQNRRARSKRKQQSTAPAYGESEVETEVESPKDKKTKPVDFQTHQSSAPLGDDMCFQSPEMSSELHFLDPNTNKADTLFPSNGSLKTARSFSQMSFYEAGNEQLAGKIETPENYSLYQQAEGYSMTERP | 317 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 388644 | 392829 | + | CePI673135_10g000300.1 | Cec10g0030 | 212945 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec10g0030 | 317 | PANTHER | WUSCHEL-RELATED HOMEOBOX 13 | 68 | 314 | IPR044559 | GO:0003700(InterPro) | |
Cec10g0030 | 317 | MobiDBLite | consensus disorder prediction | 36 | 65 | - | - | |
Cec10g0030 | 317 | Pfam | Homeodomain | 138 | 198 | IPR001356 | GO:0003677(InterPro) | |
Cec10g0030 | 317 | Gene3D | - | 140 | 204 | - | - | |
Cec10g0030 | 317 | SUPERFAMILY | Homeodomain-like | 134 | 202 | IPR009057 | - | |
Cec10g0030 | 317 | MobiDBLite | consensus disorder prediction | 213 | 228 | - | - | |
Cec10g0030 | 317 | CDD | homeodomain | 138 | 200 | IPR001356 | GO:0003677(InterPro) | |
Cec10g0030 | 317 | SMART | HOX_1 | 136 | 203 | IPR001356 | GO:0003677(InterPro) | |
Cec10g0030 | 317 | MobiDBLite | consensus disorder prediction | 196 | 239 | - | - | |
Cec10g0030 | 317 | ProSiteProfiles | 'Homeobox' domain profile. | 134 | 199 | IPR001356 | GO:0003677(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec10g0030 | Cec-Chr10:388644 | Cec11g1922 | Cec-Chr11:33420753 | 1.10E-73 | dispersed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
30307 | PF00046 | Homeodomain | 1.10E-18 | CL0123 | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec10g0030 | - | - | - | 0.0 |