Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g0064 ATGGCAGAAGAGGATACCCCATCTGAAAGTTCTGAACCTTCTTCTTATTCTTCAGCTCTCACCTCTTCAATGTCCACTCCCTTGAGGAAGGTGTTTTGTAGAATTTCAGGCCTTGCAACTTCTTTGAGAAGAAACACAGCCCCTCGTAGCAGAAGAATCTTTCATAGAGATGTTGAACAACAAGAGTTTCAATATGCAAGCTCTCATTGCCTCTCTTCTTACTACAGTGTCTTTGTTGCTCGTCTTGCCATAATGGTGATGCTAGCTATTTTGATTGGGCTGCTGACGATACTCACATGGCATTTCACGAAGAGCTACACAGCACAGTCTCTAGACAGCTTAGCGTATGGTCTTCGTCATGAACTGCTGCAGCGCCCGATTTTACGTATGTGGAGTGTCTTGAATTCCACAGCTGAAATAACCACAGCTCAGGTTAAGCTCTCAGAATATGTAATGAGGAAGTACAGCAAGCCCGTGAATCAAGCAGAGCAAGTTGAGTTGTATGAAGCAATGAGGGACGTTACTTGGGCAATGTTTGCAAGTCGAAAAGCTCTTAATGCCATAACCATCAATTACAAGAATGGGTTTGTCCAGGCATTTCATCGAGATCATAGAAGCAACAATACATTTTATATTTACTCAGATCTTGCAAACTATTCCATCAGTGCCACTCAATCATATAATATCAATCGGCTTTCTTCGGGTGAAGGGTGGTCGGAGCCACCCATACATGGCAATGTTTCTGCAAAATGGTTCCGGGAACCGCTTGATCCTATTAGCGGTGAGAAGATCGGGAAAGCAAGGCAAATCCCACCTGAGGACTTGATTAATATTGCTGGCATTTCACAGGTAGCAGATGGTGTTGCCTCATGGCATGTTACTGTGAGCAAGTACATGGATACACCATTGCTTTCAGCAGCTCTACCTGTTTCCGATGCTTCAAATGAAAGCATCGTTGCAGTGGTGGGTGTTACGACCGCCCTTTATAGCGTAGGTCAACTTATGAAGGAGCTTGTTGAGTTCCACAGTGGACATATTTATCTAACCTCTCAAGAGGGCTACTTGCTTGCTACTTCGGCCAATGCTCCCCTGTTAAGAAATACATCAAGCGGTCCAAAGCTTATGATGGCTGCCGATTCCCAGGATGATGTGATTCGATTAGGAGCTGAGTGGTTACAGAATACCTATGGAAACAATTTTCCTCCTGGTCATGAGGTCCATGAGGAGAATGTCAAGCTTGGTGATAAGCAATATTACATCGACTCATTTTTCCTTAATCTAAAGAGGCTTCCTATTGTGGGGGTTGTCATCATTCCTAGACAATACATAATGGGAAAGGTAGATGAGAGAGCATACAAAACATTGGTTATACTGATTTCTGCATCCTTGTGCATCTTAGTTATTGGATGTCTATGCATTTTGATTCTGACGAAAGGAGTATCTAAGGAAATGAAACTAAGGGCAGAACTAATAAGCCATCTTGATGCAAGAAGAAGAGCGGAGGCATCTAGTAATTACAAGAGTCAATTTCTAGCGAATATGAGTCATGAGCTGAGGACACCAATGGCTGCAGTAATTGGACTGCTGGACATTCTAATGTGTGATGACTGTCTCAATAATGAACAATTTTCGACAGTAACTCAGATTAGAAAATGCTCAACAGCTCTACTCCGACTTCTTAACAACATACTAGATCTAAGCAAGGTTGAATCTGGAAAGCTGGTTTTGGAAGATGCAGAGTTTGACCTGGGACGAGAACTCGAAGGGCTTGTTGATATGTTCTCTGTGCAGTGCATTAACCATAATGTGGAAACTGTATTGGATCTCTCTGACAACATGCCAAAATTAGTTCGAGGAGACTCTGGTCGAGTTGTTCAAATATTCACAAACTTGATTAGCAATTCTATCAAATTCACAACTACTGGTCACATCATTCTTCGAGGGTGGTGTGAGACGTCAAATACTCTTAAAGAAACGGGAAAGTTCTGTATGGATCAGAAGAAATCACGGTTTCCTAATCGGACAAAGATGAAACAACAGGGAGACCACACAAAGAATGCCTTCAAGAAAGATAACAAAATGACCTTGTGGTTTGAACTTGATGACACTGGCTGTGGGATTGATCCAAGCAAATGGGAGTCTGTTTTTGAAAGCTTTGAGCAAGCAGATCCCTCAACAACCCGAACGCATGGTGGCACGGGTCTTGGACTATGCATTGTACGTACCTTGGTTAACAAGATGGGGGGAGAAATCAAGGTTGTAAAGAAAAACGGCCCGGGAACTCTAATGCGACTTTATTTGGTTCTCAGCACACCTGCAGACTCCACAGATCATCACTGTCAGTTTGATTTTGCAAAACATAATGCGGTGGTACTGCTTGCACTCCGTGGCAGCATGAGTCGATTAATCACATCACAGTGGCTTCGTAAAATCGGACTGTTCACTTTAGAGGCTTCAGAGTGGAATGAACTAACACTAATCCTTCAGGAACTCTTTCAAGCCAAAAGTTCTGAAAATAAAAAGGGATTTAGTCCACAGGATTCACTAGGTGAAACATTACGAGCTGAGTTAATGAGAATTAAAGATATGAAAAGCCAAATATTCATCATTGTTGCCGATATCGGGATACTGGACTTGAGCACGGATATTTGGAAGGACCAACTTTACTTCCTTGACAAGTACTCTGGAAAAGCAAAATTTGCTTGGATGTTAAACCATGATACATCCAACGCCATAAAGATGGAGCTCCGGGGAAAAGGGTACATTATAATGAACAATAAGCCACTGTACAGATCAAAGATGATTCATATTTTGGAATCTGTTATGAAGGACAGAAATCTTGAGTTGCAAAGGAAAAATGCTTTAAGAACTGCATCAAAAGAAGGGGATTATCATGAATGTCTTGAAATTGATTCCACTCAGTTTGAAACTGCCAGCTCTGATGATTCTGATGTATCTGAACTTGGAAATCCTAACTCTCAGTGTGCGACATTTGAAGTCAGAGACAGCCAAGAAGAAATGACACCGAAACCATGTCAGTCACCATTTCTGCCCATTAACAATAGTTTAGTCGAGTTAACTCATGTACATTCCATTGAGAGTAATGTGAGGACGGGCGATCAGTGTGACACGAGACAAAATTCATCAATGCCTCAATGTCAAAGTTCTGAGTCCAATGGACAGAACTTAGGATGCAACTGTCCTAAAAGCCAAGGAGAATCACATTCTAAGAACGTTCAAGGTAAGAAATCTCTTGAAGGGCTACGCATTTTGCTTGCAGAAGATACACCAGTTCTCCAAAGAGTAACAACCATAATGCTCGAAAGAATGGGAGCCACGGTCATTGCTTTCGGAGACGGATTGCAGGCTGTTGAAGCTCTGACTGCCATGGTCAGTGCTGAAGAGCAAAGAAGGGAATTCCCCACAAGATATGACTTGATTTTAATGGATTGCCAAATGCCAAAGATGGATGGCTATGAAGCAACAAAAGCAATTAGAAAGCTAGAAGCAGGAACGAGCCTTCACGTTCCAATTGTAGCATTGACAGCCCACGCAATGTCATCAGATGAAGCCAAATGCTTGGAGGTAGGAATGGATGCCTACCTAACAAAGCCAATTGACTATAAGCTGATGGTATCCACCATACTTTCCCTCACGCAGAGAAGAGTGTAA 3672 42.29 MAEEDTPSESSEPSSYSSALTSSMSTPLRKVFCRISGLATSLRRNTAPRSRRIFHRDVEQQEFQYASSHCLSSYYSVFVARLAIMVMLAILIGLLTILTWHFTKSYTAQSLDSLAYGLRHELLQRPILRMWSVLNSTAEITTAQVKLSEYVMRKYSKPVNQAEQVELYEAMRDVTWAMFASRKALNAITINYKNGFVQAFHRDHRSNNTFYIYSDLANYSISATQSYNINRLSSGEGWSEPPIHGNVSAKWFREPLDPISGEKIGKARQIPPEDLINIAGISQVADGVASWHVTVSKYMDTPLLSAALPVSDASNESIVAVVGVTTALYSVGQLMKELVEFHSGHIYLTSQEGYLLATSANAPLLRNTSSGPKLMMAADSQDDVIRLGAEWLQNTYGNNFPPGHEVHEENVKLGDKQYYIDSFFLNLKRLPIVGVVIIPRQYIMGKVDERAYKTLVILISASLCILVIGCLCILILTKGVSKEMKLRAELISHLDARRRAEASSNYKSQFLANMSHELRTPMAAVIGLLDILMCDDCLNNEQFSTVTQIRKCSTALLRLLNNILDLSKVESGKLVLEDAEFDLGRELEGLVDMFSVQCINHNVETVLDLSDNMPKLVRGDSGRVVQIFTNLISNSIKFTTTGHIILRGWCETSNTLKETGKFCMDQKKSRFPNRTKMKQQGDHTKNAFKKDNKMTLWFELDDTGCGIDPSKWESVFESFEQADPSTTRTHGGTGLGLCIVRTLVNKMGGEIKVVKKNGPGTLMRLYLVLSTPADSTDHHCQFDFAKHNAVVLLALRGSMSRLITSQWLRKIGLFTLEASEWNELTLILQELFQAKSSENKKGFSPQDSLGETLRAELMRIKDMKSQIFIIVADIGILDLSTDIWKDQLYFLDKYSGKAKFAWMLNHDTSNAIKMELRGKGYIIMNNKPLYRSKMIHILESVMKDRNLELQRKNALRTASKEGDYHECLEIDSTQFETASSDDSDVSELGNPNSQCATFEVRDSQEEMTPKPCQSPFLPINNSLVELTHVHSIESNVRTGDQCDTRQNSSMPQCQSSESNGQNLGCNCPKSQGESHSKNVQGKKSLEGLRILLAEDTPVLQRVTTIMLERMGATVIAFGDGLQAVEALTAMVSAEEQRREFPTRYDLILMDCQMPKMDGYEATKAIRKLEAGTSLHVPIVALTAHAMSSDEAKCLEVGMDAYLTKPIDYKLMVSTILSLTQRRV 1223
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 664815 670372 - CePI673135_10g000640.1 Cec10g0064 212979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g0064 1223 Gene3D - 494 573 - -
Cec10g0064 1223 Pfam Response regulator receiver domain 1090 1214 IPR001789 GO:0000160(InterPro)
Cec10g0064 1223 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 561 768 IPR036890 -
Cec10g0064 1223 MobiDBLite consensus disorder prediction 1037 1078 - -
Cec10g0064 1223 SUPERFAMILY CheY-like 1086 1221 IPR011006 -
Cec10g0064 1223 FunFam Histidine kinase 1-like protein 494 573 - -
Cec10g0064 1223 PRINTS Bacterial sensor protein C-terminal signature 696 710 IPR004358 GO:0016310(InterPro)|GO:0016772(InterPro)
Cec10g0064 1223 PRINTS Bacterial sensor protein C-terminal signature 731 749 IPR004358 GO:0016310(InterPro)|GO:0016772(InterPro)
Cec10g0064 1223 PRINTS Bacterial sensor protein C-terminal signature 714 724 IPR004358 GO:0016310(InterPro)|GO:0016772(InterPro)
Cec10g0064 1223 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 619 768 IPR003594 -
Cec10g0064 1223 Pfam His Kinase A (phospho-acceptor) domain 507 572 IPR003661 GO:0000155(InterPro)|GO:0007165(InterPro)
Cec10g0064 1223 SMART HisKA_10 506 572 IPR003661 GO:0000155(InterPro)|GO:0007165(InterPro)
Cec10g0064 1223 Gene3D - 574 773 IPR036890 -
Cec10g0064 1223 ProSiteProfiles Response regulatory domain profile. 1089 1219 IPR001789 GO:0000160(InterPro)
Cec10g0064 1223 SMART HKATPase_4 619 771 IPR003594 -
Cec10g0064 1223 Gene3D - 1068 1221 - -
Cec10g0064 1223 PANTHER TWO-COMPONENT HISTIDINE KINASE 49 777 IPR050736 -
Cec10g0064 1223 SMART REC_2 1088 1215 IPR001789 GO:0000160(InterPro)
Cec10g0064 1223 MobiDBLite consensus disorder prediction 1 22 - -
Cec10g0064 1223 MobiDBLite consensus disorder prediction 1037 1079 - -
Cec10g0064 1223 MobiDBLite consensus disorder prediction 7 22 - -
Cec10g0064 1223 CDD HisKA 507 568 IPR003661 GO:0000155(InterPro)|GO:0007165(InterPro)
Cec10g0064 1223 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 494 573 IPR036097 GO:0000155(InterPro)|GO:0007165(InterPro)
Cec10g0064 1223 CDD REC_hyHK_CKI1_RcsC-like 1090 1215 - -
Cec10g0064 1223 ProSiteProfiles Histidine kinase domain profile. 513 771 IPR005467 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0285 Cec-Chr2:2629811 Cec10g0064 Cec-Chr10:664815 1.40E-40 dispersed
Cec02g1577 Cec-Chr2:33357165 Cec10g0064 Cec-Chr10:664815 4.00E-67 dispersed
Cec10g0064 Cec-Chr10:664815 Cec11g0114 Cec-Chr11:1363374 1.90E-41 dispersed
Cec10g0064 Cec-Chr10:664815 Cec02g0970 Cec-Chr2:13922414 2.00E-38 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30309 PF02518 HATPase_c 6.80E-23 CL0025 Cec TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g0064 - - - 0.0