Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g0089 ATGAGATTGGGAAGCAACTATTTAGAATTAGTACTTTGGAAATACTTTGGTTGGCATCGCCAATGGGCTGGTTTGGCCTTGGTTATGGGCAGGATGGGAGGAAGGCAAAGGACTTACACCGCTAATTCCAGTGATTATAAGCTTCTTGAAGAGATTGGTTATGGTGCTAGTGCTACTGTTTTTAGAGCGATCTATACTCCGTCAAATGAAGTCGTCGCCATCAAGTGTTTGGATCTTGATCGCTGCAATAGTAATCTTGATGATATACGTAGGGAGGCTCAAACAATGAGTTTGATAGATCATCCAAACCTTGTAAGGGCTTATTGTTCATTTGTTGTTGAACGAAACCTTTGGGTTGTCATGCCATTCATGGCAGAGGGTTCTTGTTTGCACCTAATGAAGACAGCGTACTCAGATGGCTTTGAAGAGGTTGCTATTGGTTCTATCTTGAAAGAGACTCTTAAAGCTTTGGAGTACCTTCATCGCCAAGGGCACATACATCGGGATGTCAAGGCTGGAAATATACTACTTGATAGTAATGGGTCTGTGAAGCTTGCTGATTTTGGTGTTTCAGCTTGCATGTTTGATACAGGTGATAGACAGCGCTCCAGAAATACCTTTGTGGGAACCCCATGCTGGATGGCACCGGAGGTATTGCAACCAGGAACTGGATATAATTCCAAGGCTGATATTTGGTCCTTTGGTATTACAGCTTTGGAGTTGGCTCATGGTCATGCACCATTTTCAAAATATCCTCCAATGAAGGTGCTTCTTATGACCATACAAAATGCTCCTCCTGGGCTGGATTATGATAGAGATAAACGGTTCTCTAAGTCTTTTAAAGAAATGGTTGCAATGTGCCTGGTGAAGGATCAAACCAAGAGGCCAACAGCTGAGAAACTTTTAAAGCACTCCTTTTTCAAGAATGCTAAGCCTCCAGAGGTTTCTTTGAAGAAACTATTTGCTAACTTGCCTCCTCTTTCACATCGTGTAAAGGAGCTGCAGCTTAAGGATGCTGCCCAGCTAGCCTTGAAGAAAATGCCTTCAGCAGAGCAAGAAGCATTATCACAGAGTGAGTACCAGCGAGGAGTTAGTGCATGGAACTTTGATGTCGAGGATTTGAAAGCCCAAGCTTCCCTGGTGAATGATGATATGGCAGAGATGAAGGAAGAGGAGGAGAGTCTAAATTCTTGTAGTGTTAAGGAGGCCTTTTGTCCTCAAGCTAGTATGAAGAATTTCAATTCATGTAATGAATCAAATCAGGATGAGCATGGAGTAGGGGCAAGTGGTCAGGGATTGTCACTAGTAGAGTGCTTGAGCAAAAAGGGAAACTTTATGGAAAGTGATATGCTGAAAGCTGGGTTGCAAGAAAAAACTGGATGGAAGAGAAATGGAACTAGCAATGAAGCAGAAGCATCTACCTCTGGCCAAGACATTGTACAAGGCAAGACCAAAACCCAACTGCCAAAAGGTCGTCAAACTCAAAGTGGTCCACTTCTACCTGGCACTGTGCTCAGTCATTCTTTATCAGAAAGAGTGCGAGGCTCTGAGAGGTTTGATTCTGAAATTCAACCATCTGCTGAAAAAAATCGTCGAGAAGCACGGCAAGCTCCAAGCTTCAGTGGTCCACTAATGCTGCCAAACCGCGCCTCTGCAAACAGCCTATCAGCTCCAATAAAACCTTCTGGAGGGTTTAGAGATTCAATGGATGACAAATCCAAAGCTAATCTTGTGCAAATTAAGGGACGTTTTTCAGTGACGTCAGAGAACCTAGATCTCGTAAAGGATATTCCATTGAGCACGGTTTCACGTCGGTCTTCACAGAACTCTCCTCTACGAAAGTCAGCTAGTGTTGGTGATTGGATATTCGATTCCAAGCAGTCTGTCAGCCAACAACCCCCTAAGGAGGCTTGCAACGTCAACGTGCCTACATCAATTCTTTTGCCTCATCTTCAGAATCTTTTCCATCAGACCTCAATTCAGCAGGATCTTATAGTGAACTTGTTGAATAGCTTACAAGCAGCAGACGTGGTTGATGCTTCTCAAAACGGAAAGTTGCCTCCATTGCCCCGAAGCTCGGAGAATAATGGAAGTGCTGAAACAACTGCAGTTGAGAGAGAGCGCTTACTGCTTCGGAAAGTCTCTGAACTCCAAGCTAGAATGACGCATTTGACTTATGAATTGACCGCTGAAAAGTTGAAATACATTCAATTACAAGAGCAGTTCAACTCGGCATCTGGTCAGGAAGAAAACGAGATCAAAAGGGAAGAAAATGTATGA 2280 43.55 MRLGSNYLELVLWKYFGWHRQWAGLALVMGRMGGRQRTYTANSSDYKLLEEIGYGASATVFRAIYTPSNEVVAIKCLDLDRCNSNLDDIRREAQTMSLIDHPNLVRAYCSFVVERNLWVVMPFMAEGSCLHLMKTAYSDGFEEVAIGSILKETLKALEYLHRQGHIHRDVKAGNILLDSNGSVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGTGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKRFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKNAKPPEVSLKKLFANLPPLSHRVKELQLKDAAQLALKKMPSAEQEALSQSEYQRGVSAWNFDVEDLKAQASLVNDDMAEMKEEEESLNSCSVKEAFCPQASMKNFNSCNESNQDEHGVGASGQGLSLVECLSKKGNFMESDMLKAGLQEKTGWKRNGTSNEAEASTSGQDIVQGKTKTQLPKGRQTQSGPLLPGTVLSHSLSERVRGSERFDSEIQPSAEKNRREARQAPSFSGPLMLPNRASANSLSAPIKPSGGFRDSMDDKSKANLVQIKGRFSVTSENLDLVKDIPLSTVSRRSSQNSPLRKSASVGDWIFDSKQSVSQQPPKEACNVNVPTSILLPHLQNLFHQTSIQQDLIVNLLNSLQAADVVDASQNGKLPPLPRSSENNGSAETTAVERERLLLRKVSELQARMTHLTYELTAEKLKYIQLQEQFNSASGQEENEIKREENV 759
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 870493 881448 + CePI673135_10g000890.1 Cec10g0089 213004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g0089 759 CDD STKc_OSR1_SPAK 44 307 - -
Cec10g0089 759 MobiDBLite consensus disorder prediction 686 702 - -
Cec10g0089 759 MobiDBLite consensus disorder prediction 456 547 - -
Cec10g0089 759 FunFam serine/threonine-protein kinase BLUS1-like isoform X2 127 357 - -
Cec10g0089 759 MobiDBLite consensus disorder prediction 460 503 - -
Cec10g0089 759 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 37 738 IPR047173 GO:0043539(InterPro)
Cec10g0089 759 Gene3D Transferase(Phosphotransferase) domain 1 127 358 - -
Cec10g0089 759 ProSitePatterns Protein kinases ATP-binding region signature. 52 75 IPR017441 GO:0005524(InterPro)
Cec10g0089 759 Coils Coil 371 391 - -
Cec10g0089 759 FunFam Serine/threonine-protein kinase BLUS1 35 123 - -
Cec10g0089 759 SUPERFAMILY Protein kinase-like (PK-like) 44 362 IPR011009 -
Cec10g0089 759 MobiDBLite consensus disorder prediction 511 535 - -
Cec10g0089 759 SMART serkin_6 46 307 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec10g0089 759 MobiDBLite consensus disorder prediction 682 703 - -
Cec10g0089 759 ProSiteProfiles Protein kinase domain profile. 46 307 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec10g0089 759 Pfam Protein kinase domain 46 307 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec10g0089 759 Gene3D Phosphorylase Kinase; domain 1 35 123 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec10g0089 Cec-Chr10:870493 Cec10g1294 Cec-Chr10:27079926 8.50E-141 dispersed
Cec10g0089 Cec-Chr10:870493 Cec05g0525 Cec-Chr5:4217294 7.00E-87 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72294 PF00069 Pkinase 4.20E-61 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g0089 - - - 0.0