Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g0115 ATGTGGGCCCCGGCTGTCCTCCTTGAAATTAAACGAGAATATGCTCTGTTCGGCGATATTTTAGGGATTTTGATTGCTGTTGCTGTTGGCTGTCATTGCTTAGTGGTGAAGAATTTTCTTGGCAGCCAAACAGTGTGCGGCGGATTTCAGTTCCATTTTCGGTGGATAAAAGCTTCGAGAGTAAAAAAAAGGCAAAACGACGGGGGTGAGGATGGGGCTGCGCGTGGGAGTGGCACGCCTAGTACAAAGGAAGCCGTCAAAAGCCTGACAACGCAGATAAAGGACATGGCGTTGAAATTCTCTGGTGCTTATAGGCAGTGCAAACCCTGCACAGGATCCAGTAGCTATAAGAAAGGACAGAGACCTTATCCAGATTTTGACACAGCTTCAGAAGGGGTACCATACCCTTACATAGGAGGGGCAAGTGCAAGTTCAACTCCTGCTTGGGACTTCCCTCCTGTTAATCGGCACCCACATGTCAGATCTGAGTCTAGATTTAAAGGGACTTTCAGAGGAGATCAGACCCCTGGAGGCGATTCCACCATATCAGCATGCGATGTGGTGCTTGAGGATGAGGATGAGCCGAAAGAGTGGATGGCACAGGTGGAGCCTGGTGTTCACATTACTTTTGTGTCCCTACCCAATGGAGGCAATGATTTAAAACGAATTCGTTTCAATCGAGAAATGTTTAACAAATGGCAAGCTCAGCGATGGTGGGGAGAGAACTATGATAGAATAACGGAGCTCTATAATGTCCAGAGATTCAATCAACAAGCTCTTCATACGCCACCGAGAACTGAGGACGGGAGGGATTCTTCATACTCAAAGATGGGAAGGGACAGTCCGATGACTTCCGCAAACAAAGATTGGACGCCGAGAAACTATAAACCTTCTGGAAGTAAAGGATTTCCATCTGACCAGCATTTTGATCATGGAAGCAGCCACCCCTATGCAGGCTCAAGTGCCTACCCAGCAGGCAGCACCAAAGGTGACATGTCGTCTATGGAAGCATCACGCACAACTACCTCTTCTAGAGACGAACCTTCAATTTCCATTAGCAATGCAAGCGACATTGAGGCAGAATGGGTCGAGGAAGATGAGCCGGGGGTCTATATAACTATCAGGCAGCTTGTTGATGGCACTAGAGAGCTTCGTCGTGTTAGATTCAGCCGTGAAAGGTTCGGGGAAATGAACGCAAAGCAATGGTGGGAACACAACAGGGAGAGGATCCAAGCTCAATACCTATAA 1248 47.92 MWAPAVLLEIKREYALFGDILGILIAVAVGCHCLVVKNFLGSQTVCGGFQFHFRWIKASRVKKRQNDGGEDGAARGSGTPSTKEAVKSLTTQIKDMALKFSGAYRQCKPCTGSSSYKKGQRPYPDFDTASEGVPYPYIGGASASSTPAWDFPPVNRHPHVRSESRFKGTFRGDQTPGGDSTISACDVVLEDEDEPKEWMAQVEPGVHITFVSLPNGGNDLKRIRFNREMFNKWQAQRWWGENYDRITELYNVQRFNQQALHTPPRTEDGRDSSYSKMGRDSPMTSANKDWTPRNYKPSGSKGFPSDQHFDHGSSHPYAGSSAYPAGSTKGDMSSMEASRTTTSSRDEPSISISNASDIEAEWVEEDEPGVYITIRQLVDGTRELRRVRFSRERFGEMNAKQWWEHNRERIQAQYL 415
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1063611 1070044 - CePI673135_10g001150.1 Cec10g0115 213030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g0115 415 PANTHER PROTEIN BREVIS RADIX-LIKE 1 63 415 IPR044532 -
Cec10g0115 415 MobiDBLite consensus disorder prediction 277 301 - -
Cec10g0115 415 MobiDBLite consensus disorder prediction 326 353 - -
Cec10g0115 415 Pfam Transcription factor BRX N-terminal domain 77 110 IPR027988 -
Cec10g0115 415 MobiDBLite consensus disorder prediction 64 85 - -
Cec10g0115 415 Pfam Transcription factor regulating root and shoot growth via Pin3 359 414 IPR013591 -
Cec10g0115 415 Pfam Transcription factor regulating root and shoot growth via Pin3 196 250 IPR013591 -
Cec10g0115 415 MobiDBLite consensus disorder prediction 257 353 - -
Cec10g0115 415 ProSiteProfiles BRX domain profile. 196 251 IPR013591 -
Cec10g0115 415 ProSiteProfiles BRX domain profile. 360 415 IPR013591 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec09g0085 Cec-Chr9:739239 Cec10g0115 Cec-Chr10:1063611 4.30E-68 dispersed
Cec10g0115 Cec-Chr10:1063611 Cec10g1384 Cec-Chr10:28155637 4.70E-08 dispersed
Cec10g0115 Cec-Chr10:1063611 Cec11g0167 Cec-Chr11:1856055 1.10E-76 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g0115 - - - 0.0