Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g0132 ATGGAAGGCGACCGGATTCTACCTTCTTCTGAAACCGTGATGGCTACCAACAAGATTACTGTTACCAACACATACAAGCTCGATCAAATGCATTGGCGGCGAAAGTTGATCAGGTACTCCCTCCGCCGCCGTTGCCGCTCTGTGGATATGAGCGGAGAAGCTGAGCAGAAACTGGAGGCTCGGCGTCTCAGAGAATTGGCAGAGAAGAAGTTCAGAGATTCCAATCTCAAGTCTGCTCTCAAGTACGCCAAGCGAGCCCACCGCCTCGATCCAAACCTTGACGGCGCCGCCGAAATCCTCACTTCCTTACAGATTCTCCGAGTCGCCGCCGACTCTCCGGATGACTGGTACTGGATTCTTCAGGTGGAGCCTTTCGCTCACATTAACACAATAAAAAAACAGTACAAGAAGCTTGCTCTGCTTCTGCATCCGGATAAGAATCCCTATTTCGGCTCCGAGGAGGCGTTCAAGCTCGTCGGCGAGGCGTTTCACTTTTTTTCCGATAAGGTCAGGAGGAAGGAGTACGATTTGAAGCTCCGGATTCGGATTCAGGACGAGAAGATTGGAGATGAGGATGTGGAGAGCGAGACGTTTTGGACTGCTTGCTCGACGTGCCGGCTTTTGCACCAGTTCGAAAAGAGGTACGTAGGGCATAATTTAGTCTGCCCTAATTGTAGGAAAAGTTTTAAGGCCGTTGAAGTTGTGTATAATGAACCTGAGATTAGGGAAATTGGGGTCATGGTTAGGGGTCGAAGGTTGAGGAATTTGAGTTCTAGGCAAAATTCTGGTAGTTTCGAGGGATTAAAAGAATCTGTGAATACTAATCAATTGAAGAGAAATACTACAGTGAGTAAGACGAATGGTGAGAAGAAGAAAGGTCTGGAGTTAAATGGAAAAGCTGGTTCTATAGAAGGTGAAGTTAGAAATGGCGATTTAGAGGGAGTTGATAATGATGATGAGATATGTATAAGAAGATTAAGAAGTGGGAGTTTGAGGAAGAAGATGAGTAGTGTTGGTGAGGTTTTAGGGAGGTCTAAGCTGAAGCCTGTTAAAATGGAAGAGGAAATGATGACTTTGGCTGAATTACAGTCTCAAGTGATTCAGAAAGCACGAAAAGAGAAGATGAAGCTGAAGTTAAAGGAGGAGGAGGAAGCAGAGGAAAGAGAGAATAAGAGAAAGAAAGGGGTTGAGGAGAATGACGAGGACGACGAGAGACTAACTTTGAAAGAGATGGAAGGTCTACTACGGATTCGTAGGCAAGGAGCATCAAAGCGTCCCGGGTTTTTGGAGAATGCACAGCAAAAGAATTCCAAGAAGAATGTGAATCTGGAAACTCAGAAGCAAGAAGCTTCATGTAATGGTGTTGATTTGGATATGATGGTGGTGGAAGATTCAGATTTTTATGATTTTGACAAGGACAGAATGGAGAGAAGTTTCAAAAAAGGGCAAGTGTGGGCTATATATGATGATGATGATGGAATGCCTAGGCATTATGGTTTGATTGAAGAAGTTACTGTAAATCCTTTTGAAGTGAAAATGAGTTGGTTGGATGTTCAAAACAATGGAGATGAAAGACTACTTTGTTGGGAGAAGATGGGATTTCATGTATCTTGTGGTAGATTTAAAGTCACTAAAAAAACAACCATTCATTCATTGAACATTTTTTCTCATGTTGTGGATTTTGAAAGAGCAGCGAAGGAAGTCTATAGGATTTATCCCAAAAAGGGATCAGTATGGGCACTTTACAAAGAAGAAGGAGAAGGTTTGGATGCTGAGAAGAGAAGAAACCTTTTGAGCAAAGGGAAACGAACTTACGATATTGCGGTGTTTTTAACAACTTACAGTGAGATGCATGGTTTAAGCATGGCTTATCTTGAGAAGGTTGATGGTTACAAGACCATATTCAAGAGAAAAGAGATCGGTTATCATGCTATTAGATGGTTTGAAAAGGACAATATCCAATTATTTTCGCATCAAATTCCTGCACGGAAGCTTTCTATAGATGAGGCTCTTGGGCATCTGAAGGACTGTTGGGAACTTGATCCAGCTTCTCTTCCTTCGGATTTGCTAACCACCTATTGGAACAAATAG 2091 42.95 MEGDRILPSSETVMATNKITVTNTYKLDQMHWRRKLIRYSLRRRCRSVDMSGEAEQKLEARRLRELAEKKFRDSNLKSALKYAKRAHRLDPNLDGAAEILTSLQILRVAADSPDDWYWILQVEPFAHINTIKKQYKKLALLLHPDKNPYFGSEEAFKLVGEAFHFFSDKVRRKEYDLKLRIRIQDEKIGDEDVESETFWTACSTCRLLHQFEKRYVGHNLVCPNCRKSFKAVEVVYNEPEIREIGVMVRGRRLRNLSSRQNSGSFEGLKESVNTNQLKRNTTVSKTNGEKKKGLELNGKAGSIEGEVRNGDLEGVDNDDEICIRRLRSGSLRKKMSSVGEVLGRSKLKPVKMEEEMMTLAELQSQVIQKARKEKMKLKLKEEEEAEERENKRKKGVEENDEDDERLTLKEMEGLLRIRRQGASKRPGFLENAQQKNSKKNVNLETQKQEASCNGVDLDMMVVEDSDFYDFDKDRMERSFKKGQVWAIYDDDDGMPRHYGLIEEVTVNPFEVKMSWLDVQNNGDERLLCWEKMGFHVSCGRFKVTKKTTIHSLNIFSHVVDFERAAKEVYRIYPKKGSVWALYKEEGEGLDAEKRRNLLSKGKRTYDIAVFLTTYSEMHGLSMAYLEKVDGYKTIFKRKEIGYHAIRWFEKDNIQLFSHQIPARKLSIDEALGHLKDCWELDPASLPSDLLTTYWNK 696
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1223705 1228128 - CePI673135_10g001320.1 Cec10g0132 213047

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g0132 696 Coils Coil 367 399 - -
Cec10g0132 696 Gene3D DnaJ domain 103 198 IPR036869 -
Cec10g0132 696 PANTHER BNAC03G44070D PROTEIN 57 685 - -
Cec10g0132 696 MobiDBLite consensus disorder prediction 378 407 - -
Cec10g0132 696 Pfam Domain of unknown function (DUF3444) 459 666 IPR024593 -
Cec10g0132 696 SMART dnaj_3 114 171 IPR001623 -
Cec10g0132 696 CDD DnaJ 115 168 IPR001623 -
Cec10g0132 696 SUPERFAMILY Chaperone J-domain 104 180 IPR036869 -
Cec10g0132 696 Coils Coil 429 449 - -
Cec10g0132 696 Pfam DnaJ domain 115 176 IPR001623 -
Cec10g0132 696 ProSiteProfiles dnaJ domain profile. 115 179 IPR001623 -
Cec10g0132 696 PRINTS DnaJ domain signature 135 150 IPR001623 -
Cec10g0132 696 PRINTS DnaJ domain signature 151 171 IPR001623 -
Cec10g0132 696 PRINTS DnaJ domain signature 117 135 IPR001623 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g0132 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec07g1637 Cec-Chr7:31920212 Cec10g0132 Cec-Chr10:1223705 1.30E-58 dispersed
Cec09g1732 Cec-Chr9:32510666 Cec10g0132 Cec-Chr10:1223705 2.50E-11 dispersed
Cec10g0132 Cec-Chr10:1223705 Cec06g0440 Cec-Chr6:4982763 6.60E-07 dispersed
Cec10g0132 Cec-Chr10:1223705 Cec11g1508 Cec-Chr11:29292589 6.20E-21 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g749 . . . . . . . . Cmo06g00627 . . . . . . . . . . . . . . . Cla10g00123 Cam10g0123 Cec10g0132 Cco10g0132 Clacu10g0128 Cmu10g0975 Cre10g0385 Cone8ag0498 Cone12ag0497 . . Lsi07g01156 . Chy04g00132 . . . Bda07g00072 Bda09g00760 Bpe08g00803 Bpe11g00312 . . Sed02g0043 . Cmo19g00227 Cma06g00619 . Car06g00553 . . Cpe15g00185 Bhi05g00433 Tan07g2028 Cmetu04g1055 Lac11g2456 Hepe06g0983 . Lcy12g1980 Cla09g01084 Cam09g1138 Cec09g1145 Cco09g1163 . . Cre09g1101 . Csa03g04572 . Cme04g00155
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0013922 1 1 1 0 0 1 1 1 1 0 0 0 1 1 1 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1 24