Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g0134 ATGAGTGGCAGTGAGATGGAGAAACCACCAAAAGACAAGGAGACGAAGACCCCGCCTCCTACTACTACTACACAGGAGCAGACTACAACCACAAGCGCTGGCACAGTTAATCCTGATTGGTCGGGTTTTCAGGCATATTCTCCTATTCCTCCACATGGTTTCTTGGCATCAAGCCCCCAAGCCCACCCATACATGTGGGGAGTTCAGCATATTATGCCTCCTTATGGCACGCCTCCACATCCATATGTTGCAATGTATCCACCTGGTGGCATATATGCTCACCCTTCCATTCCCCCGGGATCATATCCTTTTAGCCCCTTTACAATGCCTTCTCCAAATGGAATCACCGAGGCCTCTGGTAATACAGCAGGCAGTTTGGAGGGAGACGTTAAGCCACCTGAAGTGAAGGAAAAGCTGCCAATTAAAAGATCAAAAGGAAGTTTGGGCAGTTTGAACATGATTACAGGGAAGAACAATGAGCTGGGTAAAACATCTGGAACATCTGCCAATGGAGCATACTCTAAGAGTGCTGAGAGTGCCAGCGAAGGTACAAGTGAAGGAAGCGATGCCAATTCTCAAAATGAATCACAACCTAAGTTAGGTTCCAGGCCAGACACTTTGGAAGTTGAAGTATCTCAGAATGGTAACTCAATGCATGGTACTCAAAATGGAGGATCTAATACTCAGGCTATGGCTGCCATCCCATTGGCAACTGCTGGGGCCCCAGGAGTCGTTCCTGGTCCCACGACCAACTTAAATATTGGAATGGACTATTGGGGTGCATCATCCACTATCCCTGCTATGTGTGGAAAGGTTCAATCGACTCCAGTTGCTGGAGGACTAGTTACCGCTGGATCTCGGGATAGCATACAGTCACAGCTTTGGCTGCAGGATGAGAGAGAGATCAAAAGACAGAGAAGAAAGCAATCAAATAGAGAATCTGCACGACGATCCCGGTTACGCAAGCAGGCAGAATGTGACGAATTAGCACATCGAGCTGAAGCTTTACAAGAAGAAAATGCCAGTCTTAGGTCTGAAGTGAACCGGATAAGGAGTGAATATGAACAGCTACTTTCAGAGAATGCTTCTCTGAAGGAAAGACTCGGGGAAGTTCCGGGAAACAAAGAAGTAAGGGCCAGCAGGAACGGCCAGCGTTTAAGTAACGAAACCACACAACCTACAGAGTCAGAGGTTGTGCAAGTTGGTAACAAGAATTGA 1218 47.37 MSGSEMEKPPKDKETKTPPPTTTTQEQTTTTSAGTVNPDWSGFQAYSPIPPHGFLASSPQAHPYMWGVQHIMPPYGTPPHPYVAMYPPGGIYAHPSIPPGSYPFSPFTMPSPNGITEASGNTAGSLEGDVKPPEVKEKLPIKRSKGSLGSLNMITGKNNELGKTSGTSANGAYSKSAESASEGTSEGSDANSQNESQPKLGSRPDTLEVEVSQNGNSMHGTQNGGSNTQAMAAIPLATAGAPGVVPGPTTNLNIGMDYWGASSTIPAMCGKVQSTPVAGGLVTAGSRDSIQSQLWLQDEREIKRQRRKQSNRESARRSRLRKQAECDELAHRAEALQEENASLRSEVNRIRSEYEQLLSENASLKERLGEVPGNKEVRASRNGQRLSNETTQPTESEVVQVGNKN 405
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1234836 1239704 + CePI673135_10g001340.1 Cec10g0134 213049
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g0134 405 Pfam G-box binding protein MFMR 4 98 IPR012900 -
Cec10g0134 405 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 306 321 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec10g0134 405 CDD bZIP_plant_GBF1 304 354 IPR045314 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec10g0134 405 MobiDBLite consensus disorder prediction 17 42 - -
Cec10g0134 405 MobiDBLite consensus disorder prediction 120 205 - -
Cec10g0134 405 Pfam Disordered region downstream of MFMR 137 264 - -
Cec10g0134 405 SMART brlzneu 299 363 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec10g0134 405 MobiDBLite consensus disorder prediction 361 405 - -
Cec10g0134 405 MobiDBLite consensus disorder prediction 1 44 - -
Cec10g0134 405 MobiDBLite consensus disorder prediction 302 322 - -
Cec10g0134 405 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 301 364 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec10g0134 405 Gene3D - 302 356 - -
Cec10g0134 405 SUPERFAMILY Leucine zipper domain 302 358 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec10g0134 405 MobiDBLite consensus disorder prediction 148 205 - -
Cec10g0134 405 MobiDBLite consensus disorder prediction 1 15 - -
Cec10g0134 405 Coils Coil 319 367 - -
Cec10g0134 405 PANTHER G-BOX-BINDING FACTOR 3-RELATED 23 390 IPR044827 GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0006355(InterPro)|GO:0043565(PANTHER)|GO:0043565(InterPro)
Cec10g0134 405 Pfam bZIP transcription factor 299 361 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec10g0134 405 MobiDBLite consensus disorder prediction 380 405 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g0128 Cec-Chr5:1118146 Cec10g0134 Cec-Chr10:1234836 2.10E-24 dispersed
Cec04g1631 Cec-Chr4:35631489 Cec10g0134 Cec-Chr10:1234836 1.40E-32 transposed
Cec10g0134 Cec-Chr10:1234836 Cec09g1151 Cec-Chr9:11351286 1.40E-118 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30312 PF16596 MFMR_assoc 4.00E-49 No_clan Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g0134 K09060 - csv:101206627 718.768