Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec10g0170 | ATGACGGATTATCGTTTGTCGACGATGAATCTCTGGACTGACGAAAACGCGTCGGTGATGGACGCTTTCATGAACTCCGATCTGTCCTCTTACTGGGCTCCATCCGCCGCCTCCTCTCACTCTCTTCACCACCCACCGCCGCCTCAGTCCTCCGCCTCCACCTCCACTCCCCCACCGGACCCGCCCAAGTCCCTCCCTGTTTTCAATCAGGAGACTCTGCAGCAGCGGCTCCAGGCGCTGATCGACGGCGCTAGGGAGAGTTGGACTTACGCGATTTTCTGGCAGTCGTCCTATGATTATTCCGGTGCGTCGGTTTTGGGGTGGGGAGATGGGTATTACAAAGGGGAGGAGGATAAAGGGAAGGGAAAAGCGAAAATGGTGTCGTCGGCGGCAGAGCAGGCTCATCGGAAGAAGGTTTTACGGGAGCTTAACTCTTTAATTTCTGGCTCCGCTGCCGGACCGGACGATGCGGTGGATGAGGAGGTTACGGATACGGAGTGGTTCTTTTTGGTTTCGATGACTCAGTCTTTTGATAATGGAGTTTGGTTACCGAGTCAGGCGTTTTACAACTCGACGCCGATTTGGGTTTCTGGCGCCGATCGGCTGTCGGCGTCTGCCTGTGAACGGGCCAGACAGGGGAGGGTTTTTGGGTTACAGACGATGGTCTGTATTCCATCGCCAAACGGAGTTGTGGAAATGGGTTCGACGGAATTGATTCATCGAACGTCGGATTTGATGAACAAGGTCAAGATTCTGTTCAATTTCAACAATCTCGAAACGAGTTCTTGGATATCGGGAACCACCGCCGCCGATGAAGGGGAAAACGACCCGTCGTCGATGTGGATCAGTGAGCCGTCGAGTACTATCGAGATGAAGGATTCCATTACCACCACCGTCCCTTCCGGCAACGTCCCGGCAAAGCCAATCCATTCGGAAAATCCCAGTTCCAGCAGCTTAACGGAAAATATCAGCGCGATCCAACAACCATCCCATCAAAAACAAAGCCAAAGCTTCTTAAATTTCTCCGATTACGGCTTCGAATCAAATCCCTCAAAGAACACCACCGCCGCCGCAACAACCACCACTGCCACCCCATTATTCAAGCCGGAATCCGGCGGGATGCTGAATTTCGGCAACGGAAACCTCTTCTCTAGCCATTCACAGTATGTAACAAACGAACAGAACGAGAAAAAGAGATCCCCTGCTTCTCGGAGTAGCAACGACGAAGGGATCCTCTCTTTCACCTCTGGCGTGATCTTACCCTCCTCCGGTAAGGTAAAATCCGGGGACTCAGACCACTCAGATCTCGAAGCATCGGTGATCAGAGAAGTGGATAGCTGTACAAAATCATTAGAACCCGAAAAACGTCCAAGAAAAAGAGGTAGAAAACCAGCAAACGGAAGAGAAGAGCCATTGAATCACGTAGAAGCAGAGAGACAACGGCGAGAGAAGTTGAACCAGAAATTCTACGCACTCCGAGCTGTAGTTCCAAACGTATCTAAAATGGACAAGGCCTCACTACTGGGCGACGCGGTTTCTTACATCAACGAGCTCAAATCAAAGCTCCAAATAGCGGAAACGGAGAAAACAGAGATGGGAAAACATTTAGAATTGCTGAAGAAGGAGATGGGAGGGAAAGATTTCGGGAATTACCCGAACCCAAATGATGAAGATCTGAAAATAGGGAAAAGAAAGGTAATGGATATGGAGATCGAAGTTAAAATCATGGGTTGGGATGCGATGATAAGGATTCAAAGCAGCAAGAAAAATCATCCGGCGGCAAGGCTGATGGCGGCGTTTAAGGATTTAGATTTAGAAATGCTTCATGCGAGTGTTTCTGTAGTGAATGATTTGATGATTCAACAGGCAACGGTGAAGATGGGGAGCAGATTTTACACACAGGAGCAGCTTAAAATGGCTCTCGTCGCCCGAGTCGGTGGCGGCGGCGGCAGCCATGGAATGATGTGA | 1968 | 50.25 | MTDYRLSTMNLWTDENASVMDAFMNSDLSSYWAPSAASSHSLHHPPPPQSSASTSTPPPDPPKSLPVFNQETLQQRLQALIDGARESWTYAIFWQSSYDYSGASVLGWGDGYYKGEEDKGKGKAKMVSSAAEQAHRKKVLRELNSLISGSAAGPDDAVDEEVTDTEWFFLVSMTQSFDNGVWLPSQAFYNSTPIWVSGADRLSASACERARQGRVFGLQTMVCIPSPNGVVEMGSTELIHRTSDLMNKVKILFNFNNLETSSWISGTTAADEGENDPSSMWISEPSSTIEMKDSITTTVPSGNVPAKPIHSENPSSSSLTENISAIQQPSHQKQSQSFLNFSDYGFESNPSKNTTAAATTTTATPLFKPESGGMLNFGNGNLFSSHSQYVTNEQNEKKRSPASRSSNDEGILSFTSGVILPSSGKVKSGDSDHSDLEASVIREVDSCTKSLEPEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQKFYALRAVVPNVSKMDKASLLGDAVSYINELKSKLQIAETEKTEMGKHLELLKKEMGGKDFGNYPNPNDEDLKIGKRKVMDMEIEVKIMGWDAMIRIQSSKKNHPAARLMAAFKDLDLEMLHASVSVVNDLMIQQATVKMGSRFYTQEQLKMALVARVGGGGGSHGMM | 655 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 1673160 | 1675127 | + | CePI673135_10g001700.1 | Cec10g0170 | 213085 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec10g0170 | 655 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 469 | 518 | IPR011598 | GO:0046983(InterPro) | |
Cec10g0170 | 655 | MobiDBLite | consensus disorder prediction | 296 | 319 | - | - | |
Cec10g0170 | 655 | Gene3D | - | 468 | 545 | IPR036638 | GO:0046983(InterPro) | |
Cec10g0170 | 655 | FunFam | Transcription factor bHLH13 | 462 | 536 | - | - | |
Cec10g0170 | 655 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 472 | 539 | IPR036638 | GO:0046983(InterPro) | |
Cec10g0170 | 655 | PANTHER | MYC | 56 | 644 | IPR045084 | GO:0000976(PANTHER)|GO:0003700(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0006355(InterPro) | |
Cec10g0170 | 655 | Coils | Coil | 515 | 542 | - | - | |
Cec10g0170 | 655 | Pfam | Helix-loop-helix DNA-binding domain | 473 | 519 | IPR011598 | GO:0046983(InterPro) | |
Cec10g0170 | 655 | MobiDBLite | consensus disorder prediction | 422 | 479 | - | - | |
Cec10g0170 | 655 | MobiDBLite | consensus disorder prediction | 428 | 479 | - | - | |
Cec10g0170 | 655 | MobiDBLite | consensus disorder prediction | 390 | 410 | - | - | |
Cec10g0170 | 655 | Pfam | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 73 | 253 | IPR025610 | - | |
Cec10g0170 | 655 | SMART | finulus | 475 | 524 | IPR011598 | GO:0046983(InterPro) | |
Cec10g0170 | 655 | MobiDBLite | consensus disorder prediction | 50 | 65 | - | - | |
Cec10g0170 | 655 | MobiDBLite | consensus disorder prediction | 36 | 67 | - | - | |
Cec10g0170 | 655 | CDD | bHLH_AtAIB_like | 466 | 542 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec10g0170 | Cec-Chr10:1673160 | Cec11g1209 | Cec-Chr11:25188406 | 1.20E-10 | dispersed | |
Cec02g0773 | Cec-Chr2:8743432 | Cec10g0170 | Cec-Chr10:1673160 | 1.90E-15 | transposed | |
Cec05g0089 | Cec-Chr5:847125 | Cec10g0170 | Cec-Chr10:1673160 | 8.40E-63 | transposed | |
Cec05g0386 | Cec-Chr5:3162439 | Cec10g0170 | Cec-Chr10:1673160 | 1.30E-14 | transposed | |
Cec06g0387 | Cec-Chr6:4359805 | Cec10g0170 | Cec-Chr10:1673160 | 2.50E-22 | transposed | |
Cec07g0051 | Cec-Chr7:569621 | Cec10g0170 | Cec-Chr10:1673160 | 4.90E-20 | transposed | |
Cec07g0109 | Cec-Chr7:1156948 | Cec10g0170 | Cec-Chr10:1673160 | 9.20E-43 | transposed | |
Cec10g0083 | Cec-Chr10:787961 | Cec10g0170 | Cec-Chr10:1673160 | 5.20E-40 | transposed | |
Cec11g1048 | Cec-Chr11:19667171 | Cec10g0170 | Cec-Chr10:1673160 | 3.20E-07 | transposed | |
Cec10g0170 | Cec-Chr10:1673160 | Cec09g1195 | Cec-Chr9:12378250 | 2.00E-210 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
30317 | PF14215 | bHLH-MYC_N | 9.00E-52 | CL0161 | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec10g0170 | K13422 | - | csv:101205372 | 1101.27 |