Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec10g0242 | ATGATGTACGGACAGAGTAATGGCTGTGAATCCGATTTTGTTCTTTTGGAAACCATACGGCGCCATTTGTTGGGAGAATCCGACGCTTACCGATGTGGGAATTTCGCCCTTGCCGGAACCGCCTCGCCGGTTTTCTGCCGGAGCTCCAGTTTCGGCAGTTTGTACCCTTGTTTGACTGAAAATTGGGGCGATTTGCCTCTAAAAGAGGATGATTCCGAGGACATGGTCATCGCCGGCGTCCTCCGTGATGCCGTCAGTGTTGGTTGGGTTCCGTCGCTCGGCGCTTCGCCGTCGGATGCCTTCAATTTTGGATTCTCCGATGTCAAGCCGGAGCCGGAGATTCTCCCGCCGGTGAACATATCGCCGGAAGTTAAGGTGCCGGTGGCGGTGGCGGAGGCGGCGGCGGCGACGCCGTTGCCGGCGGTGGTTCCGGAGAAGGGGAAGCATTACCGGGGTGTCCGGCAGCGGCCGTGGGGGAAGTTTGCGGCGGAGATTCGAGACCCAGCAAAAAACGGAGCTCGGGTTTGGCTTGGAACGTTTGAGACGGCGGAGGATGCGGCACTTGCTTATGACCGCGCCGCTTATCGAATGCGTGGCTCGAAAGCTCTTCTCAATTTCCCACTTCGAGTTAATTCCGGCGAACCCGACCCGGTTAGAGTGACATCGAAACGGTCATCGCCTCGATCGTCGCCAGAGCCTACTTCATCGTTGTCGTCGGTAGAGAGTGGGTCCCCTAAGCGGAGGAAGAAGGCGGACGGCTCGGCAGTGACACCCGCTCTAGCTTCGCCGGAGTTGATTCAATTGGTGGTGGGGACCAGTGAATTGCAAGTGGAAGCTGGCGTGGCAAAGTGTACAAGTGGCGACAAATGA | 870 | 57.7 | MMYGQSNGCESDFVLLETIRRHLLGESDAYRCGNFALAGTASPVFCRSSSFGSLYPCLTENWGDLPLKEDDSEDMVIAGVLRDAVSVGWVPSLGASPSDAFNFGFSDVKPEPEILPPVNISPEVKVPVAVAEAAAATPLPAVVPEKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAYRMRGSKALLNFPLRVNSGEPDPVRVTSKRSSPRSSPEPTSSLSSVESGSPKRRKKADGSAVTPALASPELIQLVVGTSELQVEAGVAKCTSGDK | 289 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 2672790 | 2673659 | - | CePI673135_10g002420.1 | Cec10g0242 | 213157 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec10g0242 | 289 | Gene3D | AP2/ERF domain | 148 | 210 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec10g0242 | 289 | PRINTS | Ethylene responsive element binding protein signature | 173 | 189 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec10g0242 | 289 | PRINTS | Ethylene responsive element binding protein signature | 150 | 161 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec10g0242 | 289 | PANTHER | DNA-BINDING DOMAIN | 133 | 238 | IPR044808 | GO:0003700(InterPro)|GO:0009873(InterPro) | |
Cec10g0242 | 289 | FunFam | Ethylene-responsive transcription factor 2 | 148 | 208 | - | - | |
Cec10g0242 | 289 | MobiDBLite | consensus disorder prediction | 213 | 257 | - | - | |
Cec10g0242 | 289 | Pfam | AP2 domain | 149 | 200 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec10g0242 | 289 | MobiDBLite | consensus disorder prediction | 218 | 242 | - | - | |
Cec10g0242 | 289 | SMART | rav1_2 | 149 | 213 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec10g0242 | 289 | CDD | AP2 | 148 | 207 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec10g0242 | 289 | ProSiteProfiles | AP2/ERF domain profile. | 149 | 207 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec10g0242 | 289 | SUPERFAMILY | DNA-binding domain | 149 | 209 | IPR016177 | GO:0003677(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec05g0012 | Cec-Chr5:147065 | Cec10g0242 | Cec-Chr10:2672790 | 1.40E-22 | dispersed | |
Cec05g0013 | Cec-Chr5:151837 | Cec10g0242 | Cec-Chr10:2672790 | 1.30E-24 | dispersed | |
Cec09g0746 | Cec-Chr9:6805838 | Cec10g0242 | Cec-Chr10:2672790 | 2.40E-23 | dispersed | |
Cec09g0747 | Cec-Chr9:6822629 | Cec10g0242 | Cec-Chr10:2672790 | 5.00E-20 | dispersed | |
Cec10g0242 | Cec-Chr10:2672790 | Cec07g0295 | Cec-Chr7:2893352 | 4.80E-20 | dispersed | |
Cec10g0242 | Cec-Chr10:2672790 | Cec10g0243 | Cec-Chr10:2705351 | 7.70E-26 | tandem | |
Cec01g0441 | Cec-Chr1:4578912 | Cec10g0242 | Cec-Chr10:2672790 | 3.10E-82 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
30324 | PF00847 | AP2 | 1.20E-14 | CL0081 | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec10g0242 | K09286 | - | csv:101203663 | 427.943 |