Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g0247 ATGGTTGGAGTAGAATCCAATCCATGGTCGATCGTCATTCCTGTTGATCAATCGCAGCTTCCATCGACTTCTTCTTTTCCGGCTGCCGGGACGGTGGCGACTTCTGTGAGAATTTCGTTATCTGTATTTCTTCCGTCGAGATCTTCTCCGATTTTTCCATTACTGGGGTTTGGTTTAGGAATGAATGTTAGGTTTTCGCGATGGGGGATGTTAATTTTCGATTTTAGGGGCTTTTTATTTGAGGCTATGTATATTGAGGAACTGAAGGAAGGGGAGTTGCAGAGTGGGGAAGAGGGGAATTCAGGGGTTATTGTTAGTAATTTGGAGAGTCAAAGCATTGTTAGGTCTGATGTGAAAAGGATCGTTGTTGGAGTTGGGGCTCGTGTACTTTTCTACCCGACTTTGCTTTACAATGTTTTTAGAAATAAGCTTCAGACGGAGTTTCGTTGGTGGGACAAGGTTGATGAGTTTGTATTGTTAGGTGCTGTTCCATTCCCTGCTGATGTTCCCCGTTTGAAGGAGGTTGGCGTTCGAGGGGTGATAACACTAAATGAGCCATATGAGACTCTGGTTCCTTCAACTCTATATCGTGATCATGGAATTGATCATCTGACCATTCCGACAAGAGACTATTACTTTGCACCTTTATTGAGTGACATTTGCATTGCTGTAAATTTCATCCACAAAAATGCATCACATGGACAGACTACATATGTTCACTGTAAAGCTGGACGAGGGCGTAGCACAACCATTGTTATTTGCTATCTGGTGCAATACAAGCAAATGACGCCAGATGAAGCTTATAAGCATGTGAAATCAATCAGGCCAAGGGTGCTTTTAGCATCATCACAGTGGCAGGCTGTCCTGGAATTCTACCACCTGATTGTGCAGAAGGATGTTTCCTTCTGCCACATAGATGATCTAGGAAAGGAACTATCAGGATCATCGCATGATCTTATCGCATTTGATGATAGTTCTGTAGTTGTTGTAAAAGAATCCGATCTAGATGGATATGACCAAAGTATCAGCCAAAGTGACATGGGTGATATCTGGGCAGATTTAAGTGTGGTCTGCAGGGTTCGTGTTGCTGGTCAGGCAGCCCTCACAAGAATCTCTTGTTTGTGGCTCAGCTATCGAGCAAAACACCATAGCCAGAAGATTTCAGGAGATGATCTAGGCGTCGGGAAGGGCTGTTCACTTAGTGCTACTCATTTGGAAGGGTTCAGTGTGGACATCCATGTCTATTAA 1248 43.75 MVGVESNPWSIVIPVDQSQLPSTSSFPAAGTVATSVRISLSVFLPSRSSPIFPLLGFGLGMNVRFSRWGMLIFDFRGFLFEAMYIEELKEGELQSGEEGNSGVIVSNLESQSIVRSDVKRIVVGVGARVLFYPTLLYNVFRNKLQTEFRWWDKVDEFVLLGAVPFPADVPRLKEVGVRGVITLNEPYETLVPSTLYRDHGIDHLTIPTRDYYFAPLLSDICIAVNFIHKNASHGQTTYVHCKAGRGRSTTIVICYLVQYKQMTPDEAYKHVKSIRPRVLLASSQWQAVLEFYHLIVQKDVSFCHIDDLGKELSGSSHDLIAFDDSSVVVVKESDLDGYDQSISQSDMGDIWADLSVVCRVRVAGQAALTRISCLWLSYRAKHHSQKISGDDLGVGKGCSLSATHLEGFSVDIHVY 415
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2743013 2748529 - CePI673135_10g002470.1 Cec10g0247 213162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g0247 415 Gene3D Protein tyrosine phosphatase superfamily 150 300 IPR029021 -
Cec10g0247 415 SMART dsp_5 153 294 IPR020422 GO:0006470(InterPro)
Cec10g0247 415 ProSiteProfiles Dual specificity protein phosphatase domain profile. 150 297 IPR020422 GO:0006470(InterPro)
Cec10g0247 415 PANTHER PHOSPHATIDYLINOSITOL PHOSPHATASE 83 370 - -
Cec10g0247 415 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 218 286 IPR000387 GO:0016311(InterPro)
Cec10g0247 415 FunFam Dual specificity phosphatase domain protein 150 297 - -
Cec10g0247 415 CDD PTPMT1 150 292 IPR044596 GO:0004721(InterPro)
Cec10g0247 415 ProSitePatterns Tyrosine specific protein phosphatases active site. 239 249 IPR016130 GO:0016311(InterPro)
Cec10g0247 415 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 144 296 IPR029021 -
Cec10g0247 415 Pfam Dual specificity phosphatase, catalytic domain 190 292 IPR000340 GO:0016311(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec10g0247 Cec-Chr10:2743013 Cec11g0207 Cec-Chr11:2259498 5.00E-79 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g0247 - - - 0.0