Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec10g0252 | ATGGAAGATCCTCTTCACAGATTCCAATTTCATTCTCAATCTTCATCTTCTTCTTCATCAGATATCAAAACTTGCATCAAAGAAAAAAACTCCAAGAAAGTTAAACTCGAAAACGACGGCAAACATCCTACCTATCGCGGCGTTCGAATGCGACAATGGGGAAAATGGGTTTCCGAAATCAGAGAACCAAAGAAGAAATCCAGAATTTGGTTAGGCACATTTTCCACGCCGGAAATGGCCGCCAGAGCTCACGACGTCGCCGCCAGAACTATCAAAGGTCATTCCGCTTACCTTAATTTCCCTGAATTAGCTCATCGTCTCCCTCGTCCTGCTAGTTCTTCTCCTAAAGACATTCGAGCCGCCGCCGCTAAAGCCGCTTCGTTTTCCACTAATAATCTTCTCGATTCCACTCACGATGATGATCTCAACTCCGCCGCCAAATCTGACCTCAATCTCATTCGCTCCCCTTCCTCCGCCGTTGCTGCCAAATCCTCCGGTGAAATTGACGATCCTTTCTTCGATCTCCCCGATCTGTTCCTTGATGATCCCAATCATCAAATTGATACATTCTGTTTCTCCCAATTTCTCCCTATTGACGGTTTCGACTCTGTTTTTACACTGCCGCCGTCACCGCCGTCGCCGCCGTCTGATTGTTTCGCTTACAGAGGTAGCCTACTCTAG | 681 | 46.99 | MEDPLHRFQFHSQSSSSSSSDIKTCIKEKNSKKVKLENDGKHPTYRGVRMRQWGKWVSEIREPKKKSRIWLGTFSTPEMAARAHDVAARTIKGHSAYLNFPELAHRLPRPASSSPKDIRAAAAKAASFSTNNLLDSTHDDDLNSAAKSDLNLIRSPSSAVAAKSSGEIDDPFFDLPDLFLDDPNHQIDTFCFSQFLPIDGFDSVFTLPPSPPSPPSDCFAYRGSLL | 226 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 2843932 | 2844612 | + | CePI673135_10g002520.1 | Cec10g0252 | 213167 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec10g0252 | 226 | CDD | AP2 | 45 | 103 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec10g0252 | 226 | ProSiteProfiles | AP2/ERF domain profile. | 44 | 101 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec10g0252 | 226 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED | 27 | 184 | IPR051032 | - | |
Cec10g0252 | 226 | SUPERFAMILY | DNA-binding domain | 44 | 102 | IPR016177 | GO:0003677(InterPro) | |
Cec10g0252 | 226 | SMART | rav1_2 | 44 | 107 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec10g0252 | 226 | PRINTS | Ethylene responsive element binding protein signature | 45 | 56 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec10g0252 | 226 | PRINTS | Ethylene responsive element binding protein signature | 67 | 83 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec10g0252 | 226 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Cec10g0252 | 226 | FunFam | Ethylene-responsive transcription factor 2 | 43 | 102 | - | - | |
Cec10g0252 | 226 | Gene3D | AP2/ERF domain | 44 | 102 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec10g0252 | 226 | MobiDBLite | consensus disorder prediction | 8 | 23 | - | - | |
Cec10g0252 | 226 | Pfam | AP2 domain | 44 | 94 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec06g0252 | Cec-Chr6:2742331 | Cec10g0252 | Cec-Chr10:2843932 | 4.20E-33 | dispersed | |
Cec08g0157 | Cec-Chr8:3036294 | Cec10g0252 | Cec-Chr10:2843932 | 2.20E-26 | dispersed | |
Cec10g0252 | Cec-Chr10:2843932 | Cec11g0235 | Cec-Chr11:2512522 | 1.30E-36 | dispersed | |
Cec10g0252 | Cec-Chr10:2843932 | Cec06g0984 | Cec-Chr6:14046733 | 7.60E-37 | transposed | |
Cec10g0252 | Cec-Chr10:2843932 | Cec11g1573 | Cec-Chr11:30021244 | 7.60E-37 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
30328 | PF00847 | AP2 | 5.10E-13 | CL0081 | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec10g0252 | - | - | - | 0.0 |