Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g0259 ATGGAAGATTTTGCAATAATGAGTGGGTTGGTTGGAGTGCAATTTGTATATGCTGGCAACTCTGTTTTTATGAGTTTTCTTATGTCGTTGGGAATTCATCCTTCAACTCTTGTCATCTTCTCTACATTCTCCACTTTTCTCATTGTCTCTCCCATTGCTATTTATTTTGAAAGATATAACTGGCCAAAGAAACTTAGTCTAAAGTTGATTCTTCAGCTTCTTCTCATATCTTTTGGAGGGGTAACATTGTTTCAGTCCCTTTTTCTGAAAGGAATACAGCTAACATCGCCGACTTTAGCGACGGCAATGCCGAATCTCGCCCCGGGACTCATCTTTGCCATTGCTTGGATCTTTAGATTAGAAAAAGTTCAGCTAAGTTGCATCTATAGCAAGATCAAGATTTTAGGTACATTTCTATGTGTGGTTGGCGCCTTCACCATGAGCATAATGCACAGAGCGTCATCGGATGCAGCTGCAAAAGACAATACCCCACGAGAATCACCTCCGACCGAGCAAGTGTTCGATGAACAGAAGATCCTTGGTTGTGTGTATCTCTTCTCAGCGATCGTCGTTTTATCTAGCATAGTTGTTTTGCAGGCATCGACACTAGGGGATTTCCCAGCACCAATGTCGTTGTGTGCAATAACGTCTCTCATTGGAGTGCTATTAACCATAGGTGTACAGATAGTTGAATATCAGAAACTGGACATTGGTTGGCCACTTCTCAGTGTTAAGGAATTGGTTGCCTATTTTGTTGTAGGCGGAAGCATTAGCGGCGCTTGCGTGAGCTTCAACGGGTGGGCAATGAAGAAACGAGGGCCAGTTTTGGTGTCGATGTTTAGTCCGATCGGAACCGTTTGCTCACTCATTCTCTCAGTTTTCACCTTGGGAGAATCCATCAACATTGGGAGCCTTGCTGGTATGTTCCTCATGTTCACCGGCCTCTACTTCGTCCTGTGGGCGAAAGCGAAGGAGCGTTACGCCAACCGAAACCGTCCCGAGAAAACTTGA 1011 44.51 MEDFAIMSGLVGVQFVYAGNSVFMSFLMSLGIHPSTLVIFSTFSTFLIVSPIAIYFERYNWPKKLSLKLILQLLLISFGGVTLFQSLFLKGIQLTSPTLATAMPNLAPGLIFAIAWIFRLEKVQLSCIYSKIKILGTFLCVVGAFTMSIMHRASSDAAAKDNTPRESPPTEQVFDEQKILGCVYLFSAIVVLSSIVVLQASTLGDFPAPMSLCAITSLIGVLLTIGVQIVEYQKLDIGWPLLSVKELVAYFVVGGSISGACVSFNGWAMKKRGPVLVSMFSPIGTVCSLILSVFTLGESINIGSLAGMFLMFTGLYFVLWAKAKERYANRNRPEKT 336
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2957416 2959530 + CePI673135_10g002590.1 Cec10g0259 213174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g0259 336 SUPERFAMILY Multidrug resistance efflux transporter EmrE 242 323 - -
Cec10g0259 336 PANTHER WAT1-RELATED PROTEIN 11 326 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cec10g0259 336 Pfam EamA-like transporter family 180 319 IPR000620 GO:0016020(InterPro)
Cec10g0259 336 Pfam EamA-like transporter family 10 148 IPR000620 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec10g0259 Cec-Chr10:2957416 Cec10g1459 Cec-Chr10:28930552 4.70E-19 dispersed
Cec01g0410 Cec-Chr1:4321752 Cec10g0259 Cec-Chr10:2957416 3.60E-110 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g0259 - - - 0.0