Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g0274 ATGGGAAACAGAGAAGGCCACAGACCACTGCTACAACACAAGGCTAGAAGAACAAACAAAAACAACTCTCAACTTGATAAGGAAAAAGCAGCAAAGAGGAAGAAGGAAGAAGATAGCATCAAGAGAACAGAGAAATTAGCAAAAAGGGTAGCTGAAAATGGAGAAGAAGAAGGGGGAAATAGGCAATTTGAAGAAGAAGAATCTGTGAAATGGGGTTTTGATTTTGGGATTTTGGTATTCGATGGCATGCAAAGAAAAATGGGGAAGGGGGAGTTGGAATTTTCAGCCGCTTTTTCTTCTTCTTCTCCGATTTGCTCTGGTTTTGCAGAAAAGTGGGTTAAGAAAGGGGAAGAACAACAAGAACAAGAACAAGAACAAGAACTAGAAGAAGAACAAGAAGAAGGGCTTTCTTATTTTGTTTTACCCAACAACGAACCCACTTCCGTTCTTCATATGAGAAGCCCCAGTCCTCCCACATCGGCTTCTACTCTCTCTTCTTCCTTTGGTGGCGGTGGCGGTGGCGGTGGCGGTGGTTGTGTTCCTTCACTTCCTCCGGAGACTCCTGCTGTTGAACCGGTCGCCGGAACTGGTGTTGGGAACGCCATTTTTCCAGGTGGATTGGAGCGATGTGGGGTTGGATTGGAAGATTTGGAGAGTATGTGGTCGGAAACAGCCGGCCCAGAACAGTCGTTTCTCCGATGGATCGCCGGAGATGTTGTTGAAGATCCCAGTCTAGTGAGTAAAAGTGTTTTGCAAAATGGGAATATACCCTTTGATTTGGATGGCAATGCCGGTATCGGAATGGTCGATCAGGGTTCCGAATTCGACACCGGTGCTGGTAATGTTCTCGCCAACATTAATCCTAATTTATCGTTTCCTCTTGCTGCTTGTGCTGGGTTTTCTGATGTTAATGTTAACAATAAGTCTCTTAGTAGAAGCACTTGTGGGGGGGTTGTTAATTACAAGAGTTCTAGTTTGGGTTTGAACAATCGCCATGGAAATTTCAATGTTCAGAACCCTATCTGTACTGGTTCTCTTGAAAATCTTGTTGTTCCTGTTTCTGGGATGATTTATCCTCAGCAACTTCAGCCATTTGAGAGTCCTGATGAGAAACCTCAGAATTTGAATACTCAGGTTTTGTTGAACCAATATCAGCAGCCTCAGAACCCTAGTTTTTTTGTGCCATTGACGTTTGGTCAACAGGAACAGCAGCTCCAGCCTCAACTGAAGAGGCACAATTCGAGTGGAGGACTCGACCCCAACCCAAACGGGCAGATCCCGAAGGTTCCGTTTATGGATCCAGGGAATGAGATTTTTCTGAGGAATCATCAGTTGCAAGTGTTGCAACAGCAGCAGCAGCAGCAGCTTGGTTATCCACCGGGGTTTCTTCCTCAGCAGAAGGCAATGTCGCCAAAGCCGAAAGTTGTAGGGCTTGGCGACGAAATGGCGTATCACAATCCCCCACAGCAACAGCATCAGCAACATGCTTTGCTCGACCAGCTCTACAAGGCAGCAGAGCTGGTAGGGACTGGGAATTTCTCACACGCGCAAGGGATATTGGCGCGGCTCAATCACCAGCTCTCACCTGTTGGAAAGCCCCTTCAAAGGGCTGCTTTCTACTTCAAGGAGGCTCTTCAATTGCTCCTCCTTATGAACAACCCAGTTAATCCTCCTCCACCTCGCTGCCCGACACCGTTTGATGTGATCTTCAAGATGGGTGCTTACAAGGTGTTTTCCGAAATCTCCCCACTCATTCAGTTTGTGAATTTCACCTGCAACCAGGCACTGCTCGAGGCCCTCGATGACGTTGATCGAATTCACATTGTAGATTTCGATATTGGTTTTGGAGCTCAGTGGGCTTCTTTTATGCAGGAACTGTCCTTGAGGAACCGGGGTGCACTGTCACTCAAAATCACTGCTTTTGCCTCTCCCTCCACTCACCATCCAATTGAACTCGGGCTTATGCGTGAAAATCTAACTCAATTTGCTAATGACATTGGAATAAGTTTTGAGTTCGAAGTGGTTAACTTTGATTCTTTGAACCAGAACTCCTTTCCATTGCCATTTCCTCGAGTAAGCGAAAATGAGGCTATGGCAGTAAACTTCCCTTTATGGTGCTCATCAAATCAGCCAGCGATGCTTCCGTCTCTCCTCCGTTTCATCAAGCAACTCTCACCAAAAATTGTGGTCTCACTGGACCGAGGGTGCGATCGAAGTGACCTTCCATTTCCTCAGCATATGCTTCAGGCCCTTCAGTCCTACATTAACCTCCTGGAATCTCTGGATGCTATCAATATGAATTCGGATGCCGTGAACAAGATTGAGAGGTTTCTTTTGCAACCCAGAATTGAAAGCACCGTCCTGGGACGGCTTCGAGCACCTGAAAGAATGCCCCTTTGGAAGACACTCTTTGCCTCTGCTGGGTTTACGCCTGTAACCTTTAGCAACTTCACTGAAACTCAAGCAGAATGTGTAGCAAAGAGAACTTCTGTGAGGGGATTTCACGTCGAGAAACGCCAGGCTTCCCTAGTTTTATGCTGGCAACGCCGGGAGCTCATATCTGCTTCAGCTTGGAGGTGTTGA 2583 46.73 MGNREGHRPLLQHKARRTNKNNSQLDKEKAAKRKKEEDSIKRTEKLAKRVAENGEEEGGNRQFEEEESVKWGFDFGILVFDGMQRKMGKGELEFSAAFSSSSPICSGFAEKWVKKGEEQQEQEQEQELEEEQEEGLSYFVLPNNEPTSVLHMRSPSPPTSASTLSSSFGGGGGGGGGGCVPSLPPETPAVEPVAGTGVGNAIFPGGLERCGVGLEDLESMWSETAGPEQSFLRWIAGDVVEDPSLVSKSVLQNGNIPFDLDGNAGIGMVDQGSEFDTGAGNVLANINPNLSFPLAACAGFSDVNVNNKSLSRSTCGGVVNYKSSSLGLNNRHGNFNVQNPICTGSLENLVVPVSGMIYPQQLQPFESPDEKPQNLNTQVLLNQYQQPQNPSFFVPLTFGQQEQQLQPQLKRHNSSGGLDPNPNGQIPKVPFMDPGNEIFLRNHQLQVLQQQQQQQLGYPPGFLPQQKAMSPKPKVVGLGDEMAYHNPPQQQHQQHALLDQLYKAAELVGTGNFSHAQGILARLNHQLSPVGKPLQRAAFYFKEALQLLLLMNNPVNPPPPRCPTPFDVIFKMGAYKVFSEISPLIQFVNFTCNQALLEALDDVDRIHIVDFDIGFGAQWASFMQELSLRNRGALSLKITAFASPSTHHPIELGLMRENLTQFANDIGISFEFEVVNFDSLNQNSFPLPFPRVSENEAMAVNFPLWCSSNQPAMLPSLLRFIKQLSPKIVVSLDRGCDRSDLPFPQHMLQALQSYINLLESLDAINMNSDAVNKIERFLLQPRIESTVLGRLRAPERMPLWKTLFASAGFTPVTFSNFTETQAECVAKRTSVRGFHVEKRQASLVLCWQRRELISASAWRC 860
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3139801 3142684 - CePI673135_10g002740.1 Cec10g0274 213189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g0274 860 MobiDBLite consensus disorder prediction 19 66 - -
Cec10g0274 860 Pfam GRAS domain family 498 859 IPR005202 -
Cec10g0274 860 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 480 858 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
Cec10g0274 860 MobiDBLite consensus disorder prediction 150 169 - -
Cec10g0274 860 ProSiteProfiles GRAS family profile. 488 859 IPR005202 -
Cec10g0274 860 MobiDBLite consensus disorder prediction 150 181 - -
Cec10g0274 860 Coils Coil 15 53 - -
Cec10g0274 860 Coils Coil 113 134 - -
Cec10g0274 860 MobiDBLite consensus disorder prediction 1 66 - -
Cec10g0274 860 MobiDBLite consensus disorder prediction 113 134 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec06g0313 Cec-Chr6:3630615 Cec10g0274 Cec-Chr10:3139801 8.90E-135 dispersed
Cec07g0990 Cec-Chr7:24195232 Cec10g0274 Cec-Chr10:3139801 1.70E-58 dispersed
Cec07g0991 Cec-Chr7:24246939 Cec10g0274 Cec-Chr10:3139801 8.30E-58 dispersed
Cec10g0274 Cec-Chr10:3139801 Cec11g0748 Cec-Chr11:8541739 4.30E-40 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30330 PF03514 GRAS 2.60E-93 CL0063 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g0274 K27747 - csv:101218630 1318.91