Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g0300 ATGGGGGTCTGCGATTACCCCTTTGTTCCTCGAGAAGGGGAGGATCGAGATCAGAGGCGATTTCCAAGTCATCGAGAGGTCTTAAAGTATTTGGAAGATTTCGCAAATGAATTTGGGATTTGTAAATTGGTGAGGTTTGGAACTGAAGTTGTGTTTGTTGGTTTGGAGGAGGAGCTTGGGAAATGGAGGGTTGAATTTAGATTTGAAAATGGGGTTGTTGATTATGACATTTTTGATGCTGTGGTTGTTTGTGTTGGGAATTATTCCCACCCTCGAGTTGCAGAGATTCATGGGATTGATGGATGGCCTAGGGAGCAACTACATAGTCACAATTATCGTGATCCCGAACCGTTTCGAGGTAAGGTTGTTGTGTTGATAGGTTATTCTTCAAGTGGTACGGACATTTCTCAAGAGCTCATTGAGGTTGCCAAAGAAATTCATATTGCTCGGAAATCAGCTAGAACAACAAAGCTTTTGGACACGGAATCAATTATTAATAATGTGTCATTTCATCCAATGGTCGAAAGTGTCCGTAAAGATGGGACGGTGGTCTTTCAAGACGGGTGCATCGTTTCGGCTGATGTTATTCTGCATTGCACTGGGTACAAATATCATTTCCCTTTTCTTGAAACCAATGGTATCGTTACGGTGGACGATAATCGTGTAGGACCGCTGTACAAGCATGTCTTCCCCCAGCATTGGCCCCAGGGCTTTCCTTTATTGGGTTACCATTTAAGGCAAGTTGTTTCTTTTCCCATGTTTGAGCTTCAAAGCAATTGGGTTGCTGGTGTTTTATCGAACAGGATTGCACTTCCATCGAAAGAGGAAATGTCGGCAGATGTTAATGCTTTTTATGAAGAACTCGAAGCTTTTGGCAAGCCCAAGCATCGGACCCATGAATTGGGTAGTAATAGTACGGGCTCTAATCCAAGTGGAGATTGGTGGAAAAGCCTGCCTAATGTAACTGGCTTGCAGCAACTTGTGGTCGTCCTGCCTATGAAGAATGGAGAAAGGAAATGTTCATTGCTACTAATATTAATAAAAGGGTCAATCTCGGGTCTTACCGTGATGATTGGCACGACGATGAGTTGA 1092 43.32 MGVCDYPFVPREGEDRDQRRFPSHREVLKYLEDFANEFGICKLVRFGTEVVFVGLEEELGKWRVEFRFENGVVDYDIFDAVVVCVGNYSHPRVAEIHGIDGWPREQLHSHNYRDPEPFRGKVVVLIGYSSSGTDISQELIEVAKEIHIARKSARTTKLLDTESIINNVSFHPMVESVRKDGTVVFQDGCIVSADVILHCTGYKYHFPFLETNGIVTVDDNRVGPLYKHVFPQHWPQGFPLLGYHLRQVVSFPMFELQSNWVAGVLSNRIALPSKEEMSADVNAFYEELEAFGKPKHRTHELGSNSTGSNPSGDWWKSLPNVTGLQQLVVVLPMKNGERKCSLLLILIKGSISGLTVMIGTTMS 363
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3690050 3695442 + CePI673135_10g003000.1 Cec10g0300 213215

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g0300 363 PANTHER DIMETHYLANILINE MONOOXYGENASE 2 300 IPR050346 -
Cec10g0300 363 Gene3D - 167 326 IPR036188 -
Cec10g0300 363 Pfam Flavin-binding monooxygenase-like 164 291 IPR020946 GO:0004499(InterPro)|GO:0050660(InterPro)|GO:0050661(InterPro)
Cec10g0300 363 Pfam Flavin-binding monooxygenase-like 17 151 IPR020946 GO:0004499(InterPro)|GO:0050660(InterPro)|GO:0050661(InterPro)
Cec10g0300 363 Gene3D - 1 117 IPR036188 -
Cec10g0300 363 FunFam Flavin-containing monooxygenase 95 199 - -
Cec10g0300 363 SUPERFAMILY FAD/NAD(P)-binding domain 170 299 IPR036188 -
Cec10g0300 363 PRINTS Flavin-containing monooxygenase (FMO) signature 19 34 IPR000960 GO:0050660(InterPro)|GO:0050661(InterPro)
Cec10g0300 363 PRINTS Flavin-containing monooxygenase (FMO) signature 78 94 IPR000960 GO:0050660(InterPro)|GO:0050661(InterPro)
Cec10g0300 363 PRINTS Flavin-containing monooxygenase (FMO) signature 44 56 IPR000960 GO:0050660(InterPro)|GO:0050661(InterPro)
Cec10g0300 363 PRINTS Flavin-containing monooxygenase (FMO) signature 134 149 IPR000960 GO:0050660(InterPro)|GO:0050661(InterPro)
Cec10g0300 363 PRINTS Flavin-containing monooxygenase (FMO) signature 186 213 IPR000960 GO:0050660(InterPro)|GO:0050661(InterPro)
Cec10g0300 363 PRINTS Flavin-containing monooxygenase (FMO) signature 252 265 IPR000960 GO:0050660(InterPro)|GO:0050661(InterPro)
Cec10g0300 363 SUPERFAMILY FAD/NAD(P)-binding domain 4 148 IPR036188 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g0300 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec10g0299 Cec-Chr10:3680114 Cec10g0300 Cec-Chr10:3690050 1.40E-154 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g506 . . . . . . . . . . . . . . . . . . . . . . . . Cla10g00282 Cam10g0292 Cec10g0300 Cco10g0296 Clacu10g0292 Cmu10g1131 Cre10g0539 . . . . Lsi07g01322 . . Cme06g02606 . . . . . . . . . . . . . . . Cpe08g00751 . . . . . . . . . . . . . . . . Csa03g00301 Chy06g02023 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002306 0 0 1 1 1 3 2 1 2 4 1 1 2 4 4 2 1 1 2 2 1 2 1 4 2 2 1 4 1 5 58