Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec10g0341 | ATGAGAAGGGTTCATCGGCTTTGTCTTTCTCATGCTCTTCTATTTTTAATTCTATTTCTCGTCGGATTTTGCTCTGCCGTCACTGAGAATGACATTTTGCTTCAATTCAAAGATGCTGTTACAGAGGATCCGTTTGATTTCTTGAGAACTTGGGTTGCCGGCGAGGATCATTGCCGGAGTTTCAACGGCGTGTTCTGTAACTCCGGTGGGTTCGTGGAGAGGATTGTTCTATGGAACTCCAGCTTGGCTGGAACTTTGTCGCCTTCCTTGTCGGGATTGAAGTTTTTGAGGACTTTGACATTGTATGGAAATAGATTTACTGGCAAAATTCCGATTGAATATGGCGCCATTGTTACACTGTGGAAGTTGAACTTGAGCTCCAATGCTTTTTCGGGTTCGGTTCCGGAGTTCATTGGCGATTTGCCGAGCATTCGGTTTCTGGATTTGTCTAGAAATGGCTTTACTGGGGAGATTCCTTCAGCTGTGTTCAAGAATTGTTTCAAAACTAGATTTGTTTCATTTTCTCATAACAGATTTTCAGGTAGGATACCTTCAACAATTTTGAACTGTTTGAGCCTTGAAGGCTTTGATTTCTCAAACAATGTTCTAAGTGGGAGCATTCCCTTGAAACTTTGTGATATTCAAAGATTAGAGTATGTATCTGTGAGAAGCAATGCATTGTCTGGGAGTATCCAAGGGCAGTTCTCTGCTTGCCAGAGCTTGAAACTTGTGGATCTGAGTAGCAATTTGTTCACCGGGTCACCGCCGTTCGAGGTTCTCGGATTCAAAAACATCACTTATTTTAATGTCTCATATAACAGGTTTAGTGGGGGAATTGCAGAGGTTGTGGGTTGTAGCAATAATCTAGAAGTTCTTGATGTTTCAGGAAATGGTTTGGATGGAGAGATCCCATTGAGCATTACAAAGTGTGGAAGTCTTAAAATCTTAGATTTTGAATCTAACAAGCTGGTTGGGAAGATCCCTGCTGAACTTGCAGATTTGAAAAAGCTTTTGGTGCTTCGGTTGGGTTATAACTCGATCACCGGGACGATTCCAGCCATTTTCGGGAACATCGAGCTACTTCAGGTTTTGAATTTTCACAATCTCAATCTTGTTGGTGAGATTCCTGATGACATAACCAGTTGCAGGTTTCTTCTTGAGCTGGATGTTTCTGGTAATGCATTGGAAGGGGAGATTCCTCAATCTCTTTACAACATGACATACCTTGAAATTCTTGATCTACACAATAATCATCTGAATGGAAGCATTCCATCCACACTTGGGAGCCTCTCGAAACTACAGTTTCTGGATCTAGCTCAAAACCGGCTATCTGGTTCGATACCACCTACTCTTGAAAATCTCACATTGCTGCACCATTTCAATGTCTCTTTCAATAACCTTTCAGGCGCCATACCTCCCATTAATACGATCCAAAATTTTGGGCCTTCTGCATTCTCAAACAATCCTTTTCTTTGTGGTGCTCCCCTGGATCCTTGCTCTGCTGGCAGCATCCCTGGCACGACTTCCATATCAAAGAAACCGAAGGTTCTTAGTCTATCTGCAATCATTGCAATCGTAGCAGCGGTTGTGATCCTAGTCGGGGTTTGCGTGATCTCCATTTTGAACCTAATGGCTCGGACAAGGAAGGCAAAGAGCACTGAAATCATTGAGAGTACACCACTTGGTTCAACCGATTCAGGTGTCATAATTGGGAAACTGGTTCTTTTCAGCAAAACTTTGCCATCCAAGTATGAAGACTGGGAGGCTGGCACCAAAGCTTTGCTCGACAAGGAATGCCTAATAGGGGGTGGCTCGATCGGCACCGTCTACAGGACAACTTTCGAGGGCGGCATCTCCATTGCCGTGAAGAAGCTGGAGACTCTAGGGAGGATCAGAAGCCAAGATGAGTTTGAGACTGAAATCGGACGTTTGGGAAACATCAAACACCCAAACTTAGTTGCTTTCCAGGGGTACTATTGGTCGTCATCAATGCAGTTGATTCTATCCGAATTCGTCACAAACGGCAATTTATACGACAATCTACACAGTCTGAATTATCCAGGCACCAGCACAGGCATTGGCAATACGGAGTTACATTGGTCTAGAAGATATAACATTGCAATTGGAACAGCTAGAGCTCTTGCTTATCTTCACCATGATTGTAGGCCTCCTATTCTTCACCTCAACATAAAATCAACTAACATACTGTTAGACGAAAACTACGAAGCCAAGTTATCCGATTACGGGCTGGGGAAGTTGCTTCCAGTTTTGGACAATTATATCTTAACGAAATACCATAGCGCCGTAGGGTACGTTGCACCGGAGTTAGCACAAAGTTTGAGAGCTAGTGAAAAATGCGACGTGTATAGTTTTGGAGTGATTCTACTTGAGTTGGTAACCGGGAGGAAGCCAGTTGAGAGTCCAAGAGCAAACCAGGTTGTGATTTTGTGTGAATATGTAAGGGAGTTGTTGGAAAGTGGTTCTGCTTCTGACTGTTTTGATCGAAACTTACGTGGCATTGCCGAAAACGAGCTGATCCAAGTGATGAAATTGGGATTGATTTGTACATCTGAGATCCCTTCAAAGAGACCGAGCATGGCCGAGGTTCTTCAAGTTCTCGAGTCGATACGAAACGGATTAGGATCATAG | 2649 | 43.45 | MRRVHRLCLSHALLFLILFLVGFCSAVTENDILLQFKDAVTEDPFDFLRTWVAGEDHCRSFNGVFCNSGGFVERIVLWNSSLAGTLSPSLSGLKFLRTLTLYGNRFTGKIPIEYGAIVTLWKLNLSSNAFSGSVPEFIGDLPSIRFLDLSRNGFTGEIPSAVFKNCFKTRFVSFSHNRFSGRIPSTILNCLSLEGFDFSNNVLSGSIPLKLCDIQRLEYVSVRSNALSGSIQGQFSACQSLKLVDLSSNLFTGSPPFEVLGFKNITYFNVSYNRFSGGIAEVVGCSNNLEVLDVSGNGLDGEIPLSITKCGSLKILDFESNKLVGKIPAELADLKKLLVLRLGYNSITGTIPAIFGNIELLQVLNFHNLNLVGEIPDDITSCRFLLELDVSGNALEGEIPQSLYNMTYLEILDLHNNHLNGSIPSTLGSLSKLQFLDLAQNRLSGSIPPTLENLTLLHHFNVSFNNLSGAIPPINTIQNFGPSAFSNNPFLCGAPLDPCSAGSIPGTTSISKKPKVLSLSAIIAIVAAVVILVGVCVISILNLMARTRKAKSTEIIESTPLGSTDSGVIIGKLVLFSKTLPSKYEDWEAGTKALLDKECLIGGGSIGTVYRTTFEGGISIAVKKLETLGRIRSQDEFETEIGRLGNIKHPNLVAFQGYYWSSSMQLILSEFVTNGNLYDNLHSLNYPGTSTGIGNTELHWSRRYNIAIGTARALAYLHHDCRPPILHLNIKSTNILLDENYEAKLSDYGLGKLLPVLDNYILTKYHSAVGYVAPELAQSLRASEKCDVYSFGVILLELVTGRKPVESPRANQVVILCEYVRELLESGSASDCFDRNLRGIAENELIQVMKLGLICTSEIPSKRPSMAEVLQVLESIRNGLGS | 882 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 4089807 | 4092561 | + | CePI673135_10g003410.1 | Cec10g0341 | 213256 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec10g0341 | 882 | CDD | STKc_IRAK | 601 | 876 | - | - | |
Cec10g0341 | 882 | Pfam | Protein kinase domain | 599 | 871 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec10g0341 | 882 | Gene3D | Ribonuclease Inhibitor | 26 | 173 | IPR032675 | - | |
Cec10g0341 | 882 | Gene3D | Ribonuclease Inhibitor | 174 | 503 | IPR032675 | - | |
Cec10g0341 | 882 | SUPERFAMILY | L domain-like | 29 | 280 | - | - | |
Cec10g0341 | 882 | Pfam | Leucine rich repeat N-terminal domain | 30 | 67 | IPR013210 | - | |
Cec10g0341 | 882 | FunFam | Putative LRR receptor-like serine/threonine-protein kinase | 572 | 671 | - | - | |
Cec10g0341 | 882 | Gene3D | Phosphorylase Kinase; domain 1 | 571 | 671 | - | - | |
Cec10g0341 | 882 | SMART | LRR_typ_2 | 141 | 165 | IPR003591 | - | |
Cec10g0341 | 882 | SMART | LRR_typ_2 | 406 | 429 | IPR003591 | - | |
Cec10g0341 | 882 | SMART | LRR_typ_2 | 430 | 454 | IPR003591 | - | |
Cec10g0341 | 882 | SMART | LRR_typ_2 | 334 | 357 | IPR003591 | - | |
Cec10g0341 | 882 | FunFam | Probable LRR receptor-like serine/threonine-protein kinase At1g12460 | 26 | 164 | - | - | |
Cec10g0341 | 882 | FunFam | probable LRR receptor-like serine/threonine-protein kinase At1g12460 | 165 | 502 | - | - | |
Cec10g0341 | 882 | FunFam | probable LRR receptor-like serine/threonine-protein kinase IRK | 672 | 882 | - | - | |
Cec10g0341 | 882 | Gene3D | Transferase(Phosphotransferase) domain 1 | 672 | 880 | - | - | |
Cec10g0341 | 882 | Pfam | Leucine Rich Repeat | 385 | 406 | IPR001611 | GO:0005515(InterPro) | |
Cec10g0341 | 882 | Pfam | Leucine Rich Repeat | 120 | 141 | IPR001611 | GO:0005515(InterPro) | |
Cec10g0341 | 882 | Pfam | Leucine Rich Repeat | 432 | 454 | IPR001611 | GO:0005515(InterPro) | |
Cec10g0341 | 882 | Pfam | Leucine Rich Repeat | 337 | 357 | IPR001611 | GO:0005515(InterPro) | |
Cec10g0341 | 882 | Pfam | Leucine Rich Repeat | 288 | 310 | IPR001611 | GO:0005515(InterPro) | |
Cec10g0341 | 882 | Pfam | Leucine Rich Repeat | 409 | 430 | IPR001611 | GO:0005515(InterPro) | |
Cec10g0341 | 882 | Pfam | Leucine Rich Repeat | 312 | 334 | IPR001611 | GO:0005515(InterPro) | |
Cec10g0341 | 882 | Pfam | Leucine Rich Repeat | 143 | 162 | IPR001611 | GO:0005515(InterPro) | |
Cec10g0341 | 882 | SUPERFAMILY | Protein kinase-like (PK-like) | 596 | 874 | IPR011009 | - | |
Cec10g0341 | 882 | ProSiteProfiles | Leucine-rich repeat profile. | 432 | 455 | IPR001611 | GO:0005515(InterPro) | |
Cec10g0341 | 882 | PANTHER | OS05G0588300 PROTEIN | 168 | 280 | IPR050994 | - | |
Cec10g0341 | 882 | SUPERFAMILY | L domain-like | 259 | 498 | - | - | |
Cec10g0341 | 882 | ProSiteProfiles | Protein kinase domain profile. | 595 | 876 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec07g1694 | Cec-Chr7:32530773 | Cec10g0341 | Cec-Chr10:4089807 | 1.00E-85 | dispersed | |
Cec10g0341 | Cec-Chr10:4089807 | Cec10g2282 | Cec-Chr10:36997328 | 7.20E-83 | dispersed | |
Cec10g0341 | Cec-Chr10:4089807 | Cec11g0592 | Cec-Chr11:6499016 | 4.10E-86 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
72299 | PF00069 | Pkinase | 3.50E-35 | CL0016 | Cec | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec10g0341 | - | - | - | 0.0 |