Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g0355 ATGGCTGGTCGAATTTTTGAAACCTTGTCCTTTGGTGGGTCTCAACATGGTCAAGGTAATCAATCTTTGCCATTTTCCTCTGGAAATGCTTCATTGAAGATCTTGCTATTGCATGGTTATTTAGACATTTGGGTTAAAGGAGCTAAGAACCTTCCCAATTTGGATATGTTTCACAAGACTCTTGGGGATATGTTTTCAAAAATGTCCTTTAAGGGTTCCAAAAACAGTGATGGGCAAAAGTCTCAAAAAGTTACTAGTGATCCCTATGTGACTATTTCTGTGTCAAATGCTGTGATTGGAAGAACTTTTGTGATTGATAACAATGAAAATCCTGTTTGGATGCAACATTTTAATGTTCCTGTAGCTCATTATGGTGCTGAGGTGCATTTTGTTGTTAAAGACCATGATGTTGTAGGATCACAAATCATGGGTGTTGTTGCAATTCCTGTGGAACAAGTGTATTCCGGAGCCATAGTTGATGGAACTTACCCAATCTTAAATAGCAGTAGGAAGCCCTGTAAGCCTGGGGCAGTCTTGAGTTTGTCGATTCAGTATACTCCGGCTGACCAAGCGGCCATTTTTCATGGTGGAATGTATGCGTCTCCTGATCATCAGGGAGTTTCAGGCACATATTTCCCTCTTAGGAAGGGGGGTAAAGTTACGTTGTACCAAGATGCCCATGTTGACGATGGTTGTCTTCCAACAGATTTTAGGCTTCATGGTGGGGTTCAATATGAACATAGGAGCTGCTGGGATGACATCTCTGAATCGATTAGTCAGGCTCGCCGTTTGATCTATATTACAGGCTGGTCCGTGTACCATAGTGTTAAATTGGTTAGAGATGGAACGGCCAAAGAATGTATGTTAGGGGACCTTCTTAAAGCCAAGTCCCAAGAAGGAGTAAGAGTATTGCTTCTTATATGGGACGATCCAACTTCAACTAGTATGTTGGGATATAAGACGGTTGGGATGATGAATACAAATGATGAGGAGACTCGTCGGTTTTTTAAGAACTCATCAGTCCAAGTGATTTTGTGCCCACGATCAGGTGGAAAAGGTCATAGTTGGATTAAAAAACAGGAAGCTGGAACCATCTATACCCACCATCAGAAGACAATTATTGTAGATGCTGATGCTGGAAATTACAAAAGAAAAATTGTAGCTTTTGTTGGAGGTCTTGATTTATGTTTGGGCCGATATGATACCTCGAGACATCCTCTTTTCCGGACATTGCAAACTACACATGTGGGTGACTTCCATAACCCTAATTTTACGGGACCAACTACTGGTTGTCCAAGAGAACCATGGCATGATTTGCACTCCAAGATTGATGGTCCAGCGGCGTATGACGTCCTTGCAAATTTTGAGGAGCGCTGGATGAGAGCTTCAGAGCCTCATGGGCTTAAGAAGCTAAAGAGGTTACATGAAGATGTATTGCTCAAAATTGAAAGAATTCCTGAAATTTTGGGAATAACTGATGCTTCTCAACTTTGTAATAATGATCCAGAAGCTTGGAACGTCCAGATTTTTCGCTCAATCGATTCCAACTCCGTAATAGGATTTCCTGACAAACCAAAAGATGCTATAAGTAGGAACTTAGCATGTGGAAAGAATGTGATGATAGACATGAGTATACATTCAGCATATGTTAGTGCAATTCGAGCTGCTCAACGCTTCATTTACATCGAAAACCAGTACTTCCTTGGGTCATCTTATAATTGGAGTGCTCACAAAGACTTAGGGGCTAATAACTTAATACCAATGGAAATAGCCCTTAAGATTGTGGAGAAAATCAAAGCTAAAGAAAGGTTTTCAACATATGTGGTTATTCCCATGTGGCCAGAAGGTGCTCCTACAAGCACTCCTATTCAAAGAATTCTTTTCTGGCAGAGTAGGACAATGCAAATGATGTATGAAATGATATACAAGGCGTTAGAGGAGGTTGGACTTCATAAAACATACGAGCCTCAAGACTACTTAAATTTCTTTTGCCTTGGAAACCGTGAGGTGCTCGATGTCAGAGACGGTGTTGAAGCCGGGAATGGAGAAAAGAATGCTCAATCACTTGTTCGTAAGAGTCGACGCTTTATGATCTATGTTCATTCTAAAGGAATGATAGTAGATGATGAGTACGTCTTATTGGGATCGGCAAATATCAATCAACGGTCCCTTGAAGGTACCAGAGACACTGAAATAGCAATGGGCGCATATCAGCCCCGTCATACATGGTCATCGAGAAAACGCTCGAGCCCACGTGGTCAGGTCTATGGATATAGAATGTCTTTATGGGCAGAGCACACAGGAACAATGGAGGAATGTTTTGAAAGACCAGAGAGTATTGAATGTGTAAGAAGAATCAGGTCATTGGGTGAGAGAAATTGGAGGCAATATGCAGCTGAGGAAGTGAGTGAAATGAGAAGTCATCTTCTTAAATATCCATTGCAAGTTGATCCAACTGGTAAGGTGACCCATCTTCCTGGTTCTGAAACCTTCCCTGACCTTGGTGGCAACATATTAGGAACATTCACAGTCATACAAGAAAATCTTACAATTTGA 2556 41.31 MAGRIFETLSFGGSQHGQGNQSLPFSSGNASLKILLLHGYLDIWVKGAKNLPNLDMFHKTLGDMFSKMSFKGSKNSDGQKSQKVTSDPYVTISVSNAVIGRTFVIDNNENPVWMQHFNVPVAHYGAEVHFVVKDHDVVGSQIMGVVAIPVEQVYSGAIVDGTYPILNSSRKPCKPGAVLSLSIQYTPADQAAIFHGGMYASPDHQGVSGTYFPLRKGGKVTLYQDAHVDDGCLPTDFRLHGGVQYEHRSCWDDISESISQARRLIYITGWSVYHSVKLVRDGTAKECMLGDLLKAKSQEGVRVLLLIWDDPTSTSMLGYKTVGMMNTNDEETRRFFKNSSVQVILCPRSGGKGHSWIKKQEAGTIYTHHQKTIIVDADAGNYKRKIVAFVGGLDLCLGRYDTSRHPLFRTLQTTHVGDFHNPNFTGPTTGCPREPWHDLHSKIDGPAAYDVLANFEERWMRASEPHGLKKLKRLHEDVLLKIERIPEILGITDASQLCNNDPEAWNVQIFRSIDSNSVIGFPDKPKDAISRNLACGKNVMIDMSIHSAYVSAIRAAQRFIYIENQYFLGSSYNWSAHKDLGANNLIPMEIALKIVEKIKAKERFSTYVVIPMWPEGAPTSTPIQRILFWQSRTMQMMYEMIYKALEEVGLHKTYEPQDYLNFFCLGNREVLDVRDGVEAGNGEKNAQSLVRKSRRFMIYVHSKGMIVDDEYVLLGSANINQRSLEGTRDTEIAMGAYQPRHTWSSRKRSSPRGQVYGYRMSLWAEHTGTMEECFERPESIECVRRIRSLGERNWRQYAAEEVSEMRSHLLKYPLQVDPTGKVTHLPGSETFPDLGGNILGTFTVIQENLTI 851
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4190904 4196854 + CePI673135_10g003550.1 Cec10g0355 213270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g0355 851 SMART pld_4 364 399 IPR001736 GO:0003824(InterPro)
Cec10g0355 851 SMART pld_4 696 723 IPR001736 GO:0003824(InterPro)
Cec10g0355 851 Pfam Phospholipase D Active site motif 698 723 IPR001736 GO:0003824(InterPro)
Cec10g0355 851 PANTHER PHOSPHOLIPASE D 36 841 IPR015679 GO:0004630(PANTHER)|GO:0005886(PANTHER)|GO:0009395(PANTHER)
Cec10g0355 851 FunFam Phospholipase D 512 742 - -
Cec10g0355 851 SUPERFAMILY Phospholipase D/nuclease 545 783 - -
Cec10g0355 851 PIRSF PLD_plant 26 851 IPR011402 GO:0004630(InterPro)|GO:0005509(InterPro)|GO:0016020(InterPro)|GO:0046470(InterPro)
Cec10g0355 851 SUPERFAMILY Phospholipase D/nuclease 206 464 - -
Cec10g0355 851 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 696 723 IPR001736 GO:0003824(InterPro)
Cec10g0355 851 ProSiteProfiles C2 domain profile. 15 163 IPR000008 -
Cec10g0355 851 Pfam C2 domain 39 164 IPR000008 -
Cec10g0355 851 Pfam Phospholipase D C terminal 771 841 IPR024632 -
Cec10g0355 851 CDD C2_plant_PLD 35 186 - -
Cec10g0355 851 Gene3D C2 domain 26 186 IPR035892 -
Cec10g0355 851 SMART C2_3c 40 162 IPR000008 -
Cec10g0355 851 FunFam Phospholipase D delta 241 478 - -
Cec10g0355 851 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 364 399 IPR001736 GO:0003824(InterPro)
Cec10g0355 851 Gene3D Endonuclease Chain A 502 759 - -
Cec10g0355 851 Gene3D Endonuclease Chain A 239 478 - -
Cec10g0355 851 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 37 187 IPR035892 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec06g0020 Cec-Chr6:237099 Cec10g0355 Cec-Chr10:4190904 0.00E+00 dispersed
Cec07g1387 Cec-Chr7:29456256 Cec10g0355 Cec-Chr10:4190904 2.90E-195 dispersed
Cec08g1373 Cec-Chr8:25622781 Cec10g0355 Cec-Chr10:4190904 1.20E-196 dispersed
Cec08g1449 Cec-Chr8:26250352 Cec10g0355 Cec-Chr10:4190904 9.90E-236 dispersed
Cec09g0278 Cec-Chr9:2409357 Cec10g0355 Cec-Chr10:4190904 5.60E-199 dispersed
Cec10g0355 Cec-Chr10:4190904 Cec04g1771 Cec-Chr4:36650608 8.10E-241 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g0355 K01115 - csv:101208016 1671.75