Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g0366 ATGCTTATGGACCCTTCTTTCAATTCCTCTCACCAAGAACAACAACAAGAACAACAAGAACAAGATCAAGAAATTACCACTTCCAATCATTCTTTCCAAATGCGTCAATTACTAATCCGTTGTGCTCATTTCATTTCTCAATCTGATTTCCTTTCAGCTCATCATCTTCTTTCAATTCTCTCTTCAAATTCCTCTCCTTATGGTGATTCCACTGAAAGATTACTTCATTACTTCTCTTCTTCCCTTTCTCATCGCCTCCCTTCATATTCTTCTTTTGTTCATCATCATCATCATCATCATCATCAAGATAATGATGATGAGAGCAGGATTCAATCTTGTTACTTATCATTGAATCAAATCACACCCTTTATTAGATTTACTCATTTGACTGCAAATCAAGCCATTTTGGAAGGTATTGAAGAAAGTGGGATGATTCATGTTTTGGATTTTGATATTATGCATGGTGTTCAATGGCCTCCTCTTATGCAAGCTTTGGCTGATCGTTTTCCTTCTCCTATGCTTCGTATTACTGCTACTGGTCTTGATCTTAACTTCCTTCATAAGACTGGTGATAGGCTTTCTAAATTTGCTCAATCCCTTGGTTTGAGGTTTCAGTTTCATCCTCTTCTTCTTCTTCATGATTGCGATCATCACCGTGTTATCCCCGCCGCTCTCACGCTCTTCCCCGACGAAGCTCTCGCCGTCAACTGCGTTCTCTACTTGCACAGGCTAATGAAGGAGGATGTTCGAGTATTGCTTCATAAAATCAAGGCTTTGAATCCAAAAGTGGTGACTATAGCTGAAAAGGAAGCAAATTTCAACCACCCATTATTCATGCAAAGATTTATAGAGGCATTGAATCATTACTCTTTAATATTTAATTCATTAGAAGCAACTTTGCCTCCAAATAGTAGGGAGAGATTGGCAGTGGAGCAAGTTTGGTTTGGGAGGGAAATAGACGACGTCGTTTCAGGAGAAGGGAATAAGAAGAGAAGGCAACACTATGAAAGGTATGAATCATGGGAAATAATGCTTAAAAGTTTGGGATTTTCTAATATTCCTTTAAGCCCTTTTGCTCTTTCACAAGCCAAACTTCTTCTTAGACTTCATTACCCTTCTGAAGGTTACCATCTTCAAATCCTTCATGATTCCCTTTTCCTTGGTTGGCAAAATCAACCCCTTTTTTCAGTCTCTTCATGGCATTGA 1206 38.64 MLMDPSFNSSHQEQQQEQQEQDQEITTSNHSFQMRQLLIRCAHFISQSDFLSAHHLLSILSSNSSPYGDSTERLLHYFSSSLSHRLPSYSSFVHHHHHHHHQDNDDESRIQSCYLSLNQITPFIRFTHLTANQAILEGIEESGMIHVLDFDIMHGVQWPPLMQALADRFPSPMLRITATGLDLNFLHKTGDRLSKFAQSLGLRFQFHPLLLLHDCDHHRVIPAALTLFPDEALAVNCVLYLHRLMKEDVRVLLHKIKALNPKVVTIAEKEANFNHPLFMQRFIEALNHYSLIFNSLEATLPPNSRERLAVEQVWFGREIDDVVSGEGNKKRRQHYERYESWEIMLKSLGFSNIPLSPFALSQAKLLLRLHYPSEGYHLQILHDSLFLGWQNQPLFSVSSWH 401
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4390631 4392285 - CePI673135_10g003660.1 Cec10g0366 213281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g0366 401 MobiDBLite consensus disorder prediction 1 26 - -
Cec10g0366 401 Pfam GRAS domain family 34 400 IPR005202 -
Cec10g0366 401 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 18 400 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0010014(PANTHER)|GO:0043565(PANTHER)
Cec10g0366 401 ProSiteProfiles GRAS family profile. 25 401 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec10g0366 Cec-Chr10:4390631 Cec11g0748 Cec-Chr11:8541739 1.20E-58 dispersed
Cec10g0366 Cec-Chr10:4390631 Cec10g2124 Cec-Chr10:35838549 1.60E-34 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30334 PF03514 GRAS 2.90E-117 CL0063 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g0366 K27746 - csv:101213853 664.84