Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g0383 ATGTTGGCTGGGTGTTCTAGTTCAACATTGCTCTCGCCAAGGAATCGATTGAGAAGTGAAGCACAGCCACCATTTCCAGCTTGCCATTTGCAGTTGCCCACTTCAATGAGCACACAGAGATTGGATTTGCCCTGCAGCTTTTCCCGTTCTAAAGACACCTCTGCCACTGCCCGATCCCCGTCAATCCGCCCGGTTGCGCTCTCTGTCGAGAAGCAGAACATCAGGCTCCCGCCGTTATCCGCCACCAACCAGCAGATCAAGCAAGAGTTTTGGAATGGGAAAGGTAAGAACTTGAAGAGAATTGCAGAGCAAGTTGGGTTTGATGATGATGATTCTTCCATTAACAGCGCCAAGAGGAAGAGAGAGTGCAGAGACGACGCCGGAGATGGACTAATTCTAAGCCAATTCGGCGGTGGGGGTGGGAGTTTCTGGTTTCATCAGCCTGATGGGGATGAAGAAGGAATCTGTTTTCTTCCTGGAAGTGAAGTAATGTCTTCGCCATCGCCGTTTTTTTCAGAGATCGCCGACTTCGGAGAAGGAAATGATGGAGAAAGCAGCCATGGCCATGTAAAGGCTCAGGAAGGCTCCGGTTCGGGTTCAGGGTCGAGTTCATCATCAGAAAGTGAGAGATTTGCATTGAGAAGCAGAGTAATAACAGAGAATGTTTCAGCAGCAGCAACAACAGTGCCAGAAATTGGGAATGGAAGCTCAAGAAATCCTTCATATCATCACCATCAAGGTTCTGGTTTAGAGAATGAAAGGGAAGAAGAAGAAGGGTTTGAGCTGATAAGCCTTCTAATGGCATGTGTAGAAGCAATTGGATCAAAGAACATTGGCTTGATTAACCATTTGATAGATAAACTTGGGAGTCAAGCTTCACCAAGAGGCTCATCACCAATTACACGTTTGATTGCATATTACACAGAGGCTTTAGCAGTTAGAGTGAGCAGAGTTTGGCCACAGGTTTTTCACATAACGACACCAAGGGAATACGATCGGATGGAGGACGATACGGGGACAGCACTACGGCTGCTAAACGAGGTGAGCCCGATCCCGAAATTCATCCACTTCACAGCAAATGAGATGTTGCTCAGAGCATTTGAAGGGAAAGACAGGGTTCACATCATAGACTTCGACATAAAGCAAGGGCTGCAATGGCCAAGCTTGTTCCAAAGTTTGGCATCTAGAACAAACCCTCCAAGTCATGTGCGAATCACTGGGATCGGTGAGTCAAAGCAGGAATTGAACGAAACGGGAGATAGGCTAGCAGGGTTCGCCGAGGCATTGAGGCTGCCGTTCGAGTTTCATGCCGTGGTGGACCGGTTGGAGGATGTGAGACTGTGGATGCTTCATGTCAAGGAGCAAGAAAGTGTAGGAGTGAATTGCATGCTCCAACTTCACAAGACACTGTACGATGGCAATGGAGGAGCATTGAGGGACTTTTTGGGGCTCATAAGAAGCACAAACCCAAGTATTGTTGTCATGGCTGAGCAAGAAGCCGAGCACAACGAACCGAGGTTAGAGAGTCGAGTTGCAGCCACAATGAAGTACTACGCTGCCATATTCGATTCCCTCGATGCTAGTCTTCCACCCGATAGCTCAGCCAGGTTGAAAATTGAGGACATGTTTGGGAGAGAGATAAGGAACATGATAGCATGTGAAGGAAGGGAGAGATATGAAAGACATGTTGGATTTAAGAAATGGAAGAAGGACATGGAGCAGCAAGGAGGTCTGCAATGCGTCGGGATTTGCGACGATCGAGAGCTTCTTCAGACTCAATTCCTCTTGAAAATGTACTCATCAGCTCATGGATTCAATGTCACAAAGATCGAAGAAGAAGAAGGAGCAGCTCAAGCAATTTGCCTAACTTGGGAAGATCAGCCACTTTACACTGTCTCAGCTTGGTCAGCAGCAGAAGTTTCTGGAAGTTCATCTTCATTTAACCATCCAACTTCTTGA 1959 47.32 MLAGCSSSTLLSPRNRLRSEAQPPFPACHLQLPTSMSTQRLDLPCSFSRSKDTSATARSPSIRPVALSVEKQNIRLPPLSATNQQIKQEFWNGKGKNLKRIAEQVGFDDDDSSINSAKRKRECRDDAGDGLILSQFGGGGGSFWFHQPDGDEEGICFLPGSEVMSSPSPFFSEIADFGEGNDGESSHGHVKAQEGSGSGSGSSSSSESERFALRSRVITENVSAAATTVPEIGNGSSRNPSYHHHQGSGLENEREEEEGFELISLLMACVEAIGSKNIGLINHLIDKLGSQASPRGSSPITRLIAYYTEALAVRVSRVWPQVFHITTPREYDRMEDDTGTALRLLNEVSPIPKFIHFTANEMLLRAFEGKDRVHIIDFDIKQGLQWPSLFQSLASRTNPPSHVRITGIGESKQELNETGDRLAGFAEALRLPFEFHAVVDRLEDVRLWMLHVKEQESVGVNCMLQLHKTLYDGNGGALRDFLGLIRSTNPSIVVMAEQEAEHNEPRLESRVAATMKYYAAIFDSLDASLPPDSSARLKIEDMFGREIRNMIACEGRERYERHVGFKKWKKDMEQQGGLQCVGICDDRELLQTQFLLKMYSSAHGFNVTKIEEEEGAAQAICLTWEDQPLYTVSAWSAAEVSGSSSSFNHPTS 652
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4619877 4621835 + CePI673135_10g003830.1 Cec10g0383 213298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g0383 652 MobiDBLite consensus disorder prediction 224 254 - -
Cec10g0383 652 Pfam GRAS domain family 263 635 IPR005202 -
Cec10g0383 652 MobiDBLite consensus disorder prediction 1 22 - -
Cec10g0383 652 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 236 635 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
Cec10g0383 652 MobiDBLite consensus disorder prediction 168 210 - -
Cec10g0383 652 MobiDBLite consensus disorder prediction 1 16 - -
Cec10g0383 652 ProSiteProfiles GRAS family profile. 253 636 IPR005202 -
Cec10g0383 652 MobiDBLite consensus disorder prediction 191 210 - -
Cec10g0383 652 MobiDBLite consensus disorder prediction 224 246 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec10g0383 Cec-Chr10:4619877 Cec11g0748 Cec-Chr11:8541739 3.10E-67 dispersed
Cec10g0383 Cec-Chr10:4619877 Cec10g2124 Cec-Chr10:35838549 6.10E-39 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30336 PF03514 GRAS 1.50E-121 CL0063 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g0383 K27749 - csv:101209060 1134.78