Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec10g0414 | ATGGTAAAAACTTTCATGTCAATGTACTGGGGTGTAAAGAATATCACTTTCCAATATTTCAACTTAAATGCACCAGGAAATAGAGTGAATATTGATGGAATTCACATCGGTCGCTTTGTTGGGATTAATGTTATTAGTACGAACATTGATACTAGAGATGACAATTGTATCTCACTTAGAGATGGAAGTAAGCAAGTAACAAATACTAATGTGACATGTGGACCTGGACATGGTATCAGAGTAAGAAATCTTGAAATGTACAATGTTGAGGAAACAGTAGAGGGAATTACAGTTAAGATTTGTACATTAATGGATATATCAAATGACGTTAGAATAAAAACATGTCTACCTTCTCCTACTTTTAGAACGACTTCTGATATGTACTATGAAGATATAATGATGGTTAATGTTAGCAATCCGATTATCATAAATCAAGAGTATTGCCTATACAACCAATGTAATGCACTCACAGTCAAACTTGTTTGTAGTTCTAAGGTTCCATGTGAAAGTGTAGAATTGGCTGACATTGACCTCACATATAGTAGACCTAAAGGGCCAATTACATCTCAATATTTGAATACGAAAGCCACCATTTCAGGAAAGAAAAATCCTTCTAGTTGTTCTCCTCTTGCTCCTAACCCTTCTCCACCAGCTAAAGCTATTTGTGCTAAGTCTTCGCGAAAATTTTGCTACCCTGAGTTGGCTTCAAGTCTCTTCAACCTTTTTTGCTTTGCTTTTATCTGCTATTTACGGTTTCAAGTTGCTAAAAGAATGTTGGAGAGTTTTGCTTACAAGAGCGTGAAGATTGTAATCTTCACAAATAAACTCAACTTCCTGATGCCTTTTGGGCCTCTAGCAATTCTTGTGGATAAGTTGGCTGGACACAATAGTTGGGTCTTCTTCCTGAGTCTATTGGGTATCATACCATTGGCTGAGCGGTTAGGTTATGCCACAGAGCAGCTAGCTTTTTACACTGGTCCTACAGCTGGTGGTCTACTAAATGCTACTTTTGGAAATGCAACAGAGCTGATTATATCAATTTTTGCCCTGAGAAGTCAAATGATACGTGTCGTTCAGCTATCATTACTAGGCTCAATTCTGTCGAACATGTTGCTGGTGCTTGGCTGTGCATTCTTCTGTGGTGGGATTGTTTTCTATAAAAAGGAACAGACCTTTAACAAGGCAACTGCTGTTGTCAACTCAGGGTTGTTGTTAATGGCTGTCATGGGCCTGCTTTTTCCCGCTCTTCTCCACTACACCCACAGTGAAGCCCATTTTGGGAAGTCGGAGTTAGCACTTTCGAGATTCAGCAGTTGCATTATGCTTCTGGCTTATGCTGCTTATCTTTTCTTCCAATTGAAAAGTCAGACGAATCTTTATTCTTCCGTTTATGAGGAAGAAATTCAGAGTGAAGAAAGCTCAGATGAAGATGAAACTCCTGAGATCTCCAAGTGGGAATCAGTTATCTGGCTATCAATTTTGACTGCCTGGATCTCTGTTCTATCAAAATATCTGGTCGATGCAATTGAAATTGCATCTGAATCATTGAAAATCCCAGTGTCGTTTATTAGTGTTGTACTGCTTCCAATTGTGGGGAATGCCGCTGAGCATGCAAGTGCAATTATGTTTGCTATGAAAGATAAGCTTGATATTTCTCTGGGTGTAGCTATTGGATCATCAACCCAGATATCTATGTTTGGGATTCCTTTCTGTGTGGTAACTGGGTGGATTATGGGACAACCAATGGACTTAAACTTCCAACTCTTCGAGACGGCAACACTTTTTATAACTGTAATTGTCGTAGCTTTCTTGCTCCAGGAAGGAACTTCAAATTACTTCAAGGGACTAATGCTCATCCTTTGTTATCTGATAGTTGCTGCTAGTTTTTTCGTGCACGTCGATCCTCCTTTACCCGAGAATAAACTGGGGAGTCTGAAAGCGTAG | 1944 | 39.25 | MVKTFMSMYWGVKNITFQYFNLNAPGNRVNIDGIHIGRFVGINVISTNIDTRDDNCISLRDGSKQVTNTNVTCGPGHGIRVRNLEMYNVEETVEGITVKICTLMDISNDVRIKTCLPSPTFRTTSDMYYEDIMMVNVSNPIIINQEYCLYNQCNALTVKLVCSSKVPCESVELADIDLTYSRPKGPITSQYLNTKATISGKKNPSSCSPLAPNPSPPAKAICAKSSRKFCYPELASSLFNLFCFAFICYLRFQVAKRMLESFAYKSVKIVIFTNKLNFLMPFGPLAILVDKLAGHNSWVFFLSLLGIIPLAERLGYATEQLAFYTGPTAGGLLNATFGNATELIISIFALRSQMIRVVQLSLLGSILSNMLLVLGCAFFCGGIVFYKKEQTFNKATAVVNSGLLLMAVMGLLFPALLHYTHSEAHFGKSELALSRFSSCIMLLAYAAYLFFQLKSQTNLYSSVYEEEIQSEESSDEDETPEISKWESVIWLSILTAWISVLSKYLVDAIEIASESLKIPVSFISVVLLPIVGNAAEHASAIMFAMKDKLDISLGVAIGSSTQISMFGIPFCVVTGWIMGQPMDLNFQLFETATLFITVIVVAFLLQEGTSNYFKGLMLILCYLIVAASFFVHVDPPLPENKLGSLKA | 647 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 4972194 | 4979167 | + | CePI673135_10g004140.1 | Cec10g0414 | 213329 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec10g0414 | 647 | PANTHER | VACUOLAR CALCIUM ION TRANSPORTER | 254 | 635 | IPR004713 | GO:0006812(InterPro)|GO:0006874(PANTHER)|GO:0008324(InterPro)|GO:0009705(PANTHER)|GO:0015369(PANTHER)|GO:0016020(InterPro)|GO:0070588(PANTHER) | |
Cec10g0414 | 647 | FunFam | Vacuolar cation/proton exchanger | 475 | 631 | - | - | |
Cec10g0414 | 647 | Pfam | Sodium/calcium exchanger protein | 298 | 453 | IPR004837 | GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cec10g0414 | 647 | Pfam | Sodium/calcium exchanger protein | 487 | 629 | IPR004837 | GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cec10g0414 | 647 | Gene3D | - | 327 | 469 | IPR044880 | - | |
Cec10g0414 | 647 | Gene3D | - | 474 | 631 | IPR044880 | - | |
Cec10g0414 | 647 | NCBIfam | calcium/proton exchanger | 280 | 630 | IPR004798 | GO:0006816(InterPro)|GO:0015369(InterPro) | |
Cec10g0414 | 647 | Gene3D | - | 3 | 226 | IPR012334 | - | |
Cec10g0414 | 647 | SUPERFAMILY | Pectin lyase-like | 7 | 208 | IPR011050 | - | |
Cec10g0414 | 647 | Pfam | Glycosyl hydrolases family 28 | 12 | 155 | IPR000743 | GO:0004650(InterPro)|GO:0005975(InterPro) | |
Cec10g0414 | 647 | FunFam | Vacuolar cation/proton exchanger | 327 | 466 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec02g1110 | Cec-Chr2:24132864 | Cec10g0414 | Cec-Chr10:4972194 | 5.90E-158 | dispersed | |
Cec07g1539 | Cec-Chr7:30966589 | Cec10g0414 | Cec-Chr10:4972194 | 1.10E-152 | dispersed | |
Cec10g0414 | Cec-Chr10:4972194 | Cec10g2206 | Cec-Chr10:36470850 | 1.40E-91 | dispersed | |
Cec10g0414 | Cec-Chr10:4972194 | Cec04g0836 | Cec-Chr4:28101446 | 5.10E-94 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec10g0414 | K07300 | - | csv:101205761 | 643.269 |