Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g0414 ATGGTAAAAACTTTCATGTCAATGTACTGGGGTGTAAAGAATATCACTTTCCAATATTTCAACTTAAATGCACCAGGAAATAGAGTGAATATTGATGGAATTCACATCGGTCGCTTTGTTGGGATTAATGTTATTAGTACGAACATTGATACTAGAGATGACAATTGTATCTCACTTAGAGATGGAAGTAAGCAAGTAACAAATACTAATGTGACATGTGGACCTGGACATGGTATCAGAGTAAGAAATCTTGAAATGTACAATGTTGAGGAAACAGTAGAGGGAATTACAGTTAAGATTTGTACATTAATGGATATATCAAATGACGTTAGAATAAAAACATGTCTACCTTCTCCTACTTTTAGAACGACTTCTGATATGTACTATGAAGATATAATGATGGTTAATGTTAGCAATCCGATTATCATAAATCAAGAGTATTGCCTATACAACCAATGTAATGCACTCACAGTCAAACTTGTTTGTAGTTCTAAGGTTCCATGTGAAAGTGTAGAATTGGCTGACATTGACCTCACATATAGTAGACCTAAAGGGCCAATTACATCTCAATATTTGAATACGAAAGCCACCATTTCAGGAAAGAAAAATCCTTCTAGTTGTTCTCCTCTTGCTCCTAACCCTTCTCCACCAGCTAAAGCTATTTGTGCTAAGTCTTCGCGAAAATTTTGCTACCCTGAGTTGGCTTCAAGTCTCTTCAACCTTTTTTGCTTTGCTTTTATCTGCTATTTACGGTTTCAAGTTGCTAAAAGAATGTTGGAGAGTTTTGCTTACAAGAGCGTGAAGATTGTAATCTTCACAAATAAACTCAACTTCCTGATGCCTTTTGGGCCTCTAGCAATTCTTGTGGATAAGTTGGCTGGACACAATAGTTGGGTCTTCTTCCTGAGTCTATTGGGTATCATACCATTGGCTGAGCGGTTAGGTTATGCCACAGAGCAGCTAGCTTTTTACACTGGTCCTACAGCTGGTGGTCTACTAAATGCTACTTTTGGAAATGCAACAGAGCTGATTATATCAATTTTTGCCCTGAGAAGTCAAATGATACGTGTCGTTCAGCTATCATTACTAGGCTCAATTCTGTCGAACATGTTGCTGGTGCTTGGCTGTGCATTCTTCTGTGGTGGGATTGTTTTCTATAAAAAGGAACAGACCTTTAACAAGGCAACTGCTGTTGTCAACTCAGGGTTGTTGTTAATGGCTGTCATGGGCCTGCTTTTTCCCGCTCTTCTCCACTACACCCACAGTGAAGCCCATTTTGGGAAGTCGGAGTTAGCACTTTCGAGATTCAGCAGTTGCATTATGCTTCTGGCTTATGCTGCTTATCTTTTCTTCCAATTGAAAAGTCAGACGAATCTTTATTCTTCCGTTTATGAGGAAGAAATTCAGAGTGAAGAAAGCTCAGATGAAGATGAAACTCCTGAGATCTCCAAGTGGGAATCAGTTATCTGGCTATCAATTTTGACTGCCTGGATCTCTGTTCTATCAAAATATCTGGTCGATGCAATTGAAATTGCATCTGAATCATTGAAAATCCCAGTGTCGTTTATTAGTGTTGTACTGCTTCCAATTGTGGGGAATGCCGCTGAGCATGCAAGTGCAATTATGTTTGCTATGAAAGATAAGCTTGATATTTCTCTGGGTGTAGCTATTGGATCATCAACCCAGATATCTATGTTTGGGATTCCTTTCTGTGTGGTAACTGGGTGGATTATGGGACAACCAATGGACTTAAACTTCCAACTCTTCGAGACGGCAACACTTTTTATAACTGTAATTGTCGTAGCTTTCTTGCTCCAGGAAGGAACTTCAAATTACTTCAAGGGACTAATGCTCATCCTTTGTTATCTGATAGTTGCTGCTAGTTTTTTCGTGCACGTCGATCCTCCTTTACCCGAGAATAAACTGGGGAGTCTGAAAGCGTAG 1944 39.25 MVKTFMSMYWGVKNITFQYFNLNAPGNRVNIDGIHIGRFVGINVISTNIDTRDDNCISLRDGSKQVTNTNVTCGPGHGIRVRNLEMYNVEETVEGITVKICTLMDISNDVRIKTCLPSPTFRTTSDMYYEDIMMVNVSNPIIINQEYCLYNQCNALTVKLVCSSKVPCESVELADIDLTYSRPKGPITSQYLNTKATISGKKNPSSCSPLAPNPSPPAKAICAKSSRKFCYPELASSLFNLFCFAFICYLRFQVAKRMLESFAYKSVKIVIFTNKLNFLMPFGPLAILVDKLAGHNSWVFFLSLLGIIPLAERLGYATEQLAFYTGPTAGGLLNATFGNATELIISIFALRSQMIRVVQLSLLGSILSNMLLVLGCAFFCGGIVFYKKEQTFNKATAVVNSGLLLMAVMGLLFPALLHYTHSEAHFGKSELALSRFSSCIMLLAYAAYLFFQLKSQTNLYSSVYEEEIQSEESSDEDETPEISKWESVIWLSILTAWISVLSKYLVDAIEIASESLKIPVSFISVVLLPIVGNAAEHASAIMFAMKDKLDISLGVAIGSSTQISMFGIPFCVVTGWIMGQPMDLNFQLFETATLFITVIVVAFLLQEGTSNYFKGLMLILCYLIVAASFFVHVDPPLPENKLGSLKA 647
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4972194 4979167 + CePI673135_10g004140.1 Cec10g0414 213329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g0414 647 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 254 635 IPR004713 GO:0006812(InterPro)|GO:0006874(PANTHER)|GO:0008324(InterPro)|GO:0009705(PANTHER)|GO:0015369(PANTHER)|GO:0016020(InterPro)|GO:0070588(PANTHER)
Cec10g0414 647 FunFam Vacuolar cation/proton exchanger 475 631 - -
Cec10g0414 647 Pfam Sodium/calcium exchanger protein 298 453 IPR004837 GO:0016020(InterPro)|GO:0055085(InterPro)
Cec10g0414 647 Pfam Sodium/calcium exchanger protein 487 629 IPR004837 GO:0016020(InterPro)|GO:0055085(InterPro)
Cec10g0414 647 Gene3D - 327 469 IPR044880 -
Cec10g0414 647 Gene3D - 474 631 IPR044880 -
Cec10g0414 647 NCBIfam calcium/proton exchanger 280 630 IPR004798 GO:0006816(InterPro)|GO:0015369(InterPro)
Cec10g0414 647 Gene3D - 3 226 IPR012334 -
Cec10g0414 647 SUPERFAMILY Pectin lyase-like 7 208 IPR011050 -
Cec10g0414 647 Pfam Glycosyl hydrolases family 28 12 155 IPR000743 GO:0004650(InterPro)|GO:0005975(InterPro)
Cec10g0414 647 FunFam Vacuolar cation/proton exchanger 327 466 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g1110 Cec-Chr2:24132864 Cec10g0414 Cec-Chr10:4972194 5.90E-158 dispersed
Cec07g1539 Cec-Chr7:30966589 Cec10g0414 Cec-Chr10:4972194 1.10E-152 dispersed
Cec10g0414 Cec-Chr10:4972194 Cec10g2206 Cec-Chr10:36470850 1.40E-91 dispersed
Cec10g0414 Cec-Chr10:4972194 Cec04g0836 Cec-Chr4:28101446 5.10E-94 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g0414 K07300 - csv:101205761 643.269