Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g0419 ATGACTACCACGGCGGAGGAAACAACCATCACTTTCTCCTCCGATCATGGAGCCGCCCAAGAACAACAACACTACGCTTACGCTATGCAGCTGGTTACCTCATCGGTGCTGCCAATGACACTCCAAGCAGCGTTCGAGCTCGGTGTGTTCGAGATCTTGGCAAAGGCTGGGGATGGGGCCAAGCTCTCTCCGCCAGAGATAGCGGCTGAGATAACTACGACAAACCCGGATGCAGCGTCGATGATTGATCGGATGTTGAGGCTTCTCGCCAGCCACTCGGTGGTGGGATGCTCTGTGGGATTTGATGAAGATGGGAAAATGCAGAGACTTTATAGCCTTACGCCAGTTTCTAAGTATTATGTTCGTAATCAAGATGGTGTCTCGTTGGGTCCAACTTTATCGTTGATTCAAGATAAAGTCTTTCTCCATAGCTGGAGTGAGCTAAAGAATGCAGTTATTGAAGGAGGAGTTCCTTTCAATAGGGCTCATGGGGGGGTTCATGCCTTTGAATATCCAGGCTTGGATCCAAGATTTAACCAAGTTTTCAATGCTGCAATGATAAATCACACCACTATAGCCATCAAGAAAATTGTCAAATCCTACAAAGGCTTTGAAAACATCAAGCAACTAGTTGATGTTGGTGGTGGCCTTGGGGTCACCCTTCAAATCATCACTTCTACATACCCTTCCATCAAAGCCATCAACTTCGACTTACCTCATGTTATTCGCGATGCCCCTCCCTATCCTGGTGTAGAACATGTGGGAGGAGACATGTTTGAGAAAGTTCCAAATGGAGATGCTGTTTTCATGAAGTGGATACTTCATGATTGGAGTGACGAGCATTGTGCAAAGTTATTGAAAAATTGCTACATTGCGATCCCAAATGATGGAAAGGTAATCATAGTGGACTCAGTGGTTCCAACAGTACCTGAAACCACAGATGTAACAAAATGCATTGCCCAAGGCGATGTGCTTATGATGACTCAAAATCCAGGAGGAAAGGAGCGAACTCGAGATGAATTCGAGGCCCTCGCAACCAAAGCTGGGTTTAAACATGTCATATTCCAGTGCTTTGTGTCTAATCTCTGGGTTATTGAGTTTCTTAAAAATTAA 1113 45.37 MTTTAEETTITFSSDHGAAQEQQHYAYAMQLVTSSVLPMTLQAAFELGVFEILAKAGDGAKLSPPEIAAEITTTNPDAASMIDRMLRLLASHSVVGCSVGFDEDGKMQRLYSLTPVSKYYVRNQDGVSLGPTLSLIQDKVFLHSWSELKNAVIEGGVPFNRAHGGVHAFEYPGLDPRFNQVFNAAMINHTTIAIKKIVKSYKGFENIKQLVDVGGGLGVTLQIITSTYPSIKAINFDLPHVIRDAPPYPGVEHVGGDMFEKVPNGDAVFMKWILHDWSDEHCAKLLKNCYIAIPNDGKVIIVDSVVPTVPETTDVTKCIAQGDVLMMTQNPGGKERTRDEFEALATKAGFKHVIFQCFVSNLWVIEFLKN 370
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5043861 5046520 - CePI673135_10g004190.1 Cec10g0419 213334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g0419 370 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 29 369 IPR016461 GO:0008168(InterPro)
Cec10g0419 370 SUPERFAMILY Winged helix DNA-binding domain 20 123 IPR036390 -
Cec10g0419 370 FunFam Caffeic acid O-methyltransferase 121 369 - -
Cec10g0419 370 PANTHER O-METHYLTRANSFERASE 24 356 IPR016461 GO:0008168(InterPro)|GO:0008171(PANTHER)|GO:0008757(PANTHER)|GO:0019438(PANTHER)|GO:0032259(PANTHER)
Cec10g0419 370 Pfam Dimerisation domain 39 90 IPR012967 GO:0046983(InterPro)
Cec10g0419 370 Pfam O-methyltransferase domain 145 351 IPR001077 GO:0008171(InterPro)
Cec10g0419 370 PIRSF O-mtase 6 369 IPR016461 GO:0008168(InterPro)
Cec10g0419 370 FunFam Caffeic acid 3-O-methyltransferase 5 120 - -
Cec10g0419 370 Gene3D Vaccinia Virus protein VP39 121 369 IPR029063 -
Cec10g0419 370 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 126 367 IPR029063 -
Cec10g0419 370 Gene3D - 6 120 IPR036388 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec07g1858 Cec-Chr7:34192548 Cec10g0419 Cec-Chr10:5043861 8.40E-115 dispersed
Cec10g0417 Cec-Chr10:5024103 Cec10g0419 Cec-Chr10:5043861 2.50E-42 proximal
Cec10g0418 Cec-Chr10:5026223 Cec10g0419 Cec-Chr10:5043861 1.20E-56 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g0419 K13066 - csv:101214916 591.652