Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec10g0454 | ATGGACCCCACTGACTCCGACCTCGCCGATCCATCTCATGCCTCCTCCTCCGCTGGCGCTAAGTACAAGCTCATGTCTCCGGCCAAGCTTCCGATCTCTAGGTCCCCTTGCATTACCATCCCTCCTGGCCTCAGCCCCACTTCCTTTCTCGACTCTCCTGTTCTGCTTACCAACTTGAAGGTAGAGCCTTCTCCGACTACTGGGTCCTTTACCAAGCTTCCGATGGCACATGACTCTTCTAGCTCAGCTATTTATCCAGTGACCACCATGGCTTTTTCAAATACTAATGCCTCAGATGAAGGAAGATCCAACTACTTCGAGTTCAAACCATATGTTGGACCAAATATGGTTCCTGCAGATTTGAGTCATAGGAAAGGTGAACAATCTTCTGAAGTTCAAGTTCAAGGTCAACCTCAACCATTTACTGCTCCACCCATGACTAAAATTGAGATCAATGTCGTTTCAAATGATTTGAGCCGATCAACCCAGATGGATACACATCCAATTGGCTCAGGGGCTAGTGCTCCTGAAGCCGATGGAGATGATATCAACCATAGTTTGAACACAAATAGCAGGGTTCAGGCTCCACAATCTGATCCAAAAGGCAGTTGCATTCCAGTGGTTTCAGATAGGTTGTCTGATGATGGATATAACTGGCGGAAGTATGGACAGAAGCATGTTAAAGGGAGTGAATTTCCTCGTAGCTATTATAAATGTACCCATCCTAACTGTGAAGTGAAAAAGCTCTTTGAACGCTCCCATGATGGGCAAATAGCTGATATTATCTATAAGGGTACCCACGATCATCCTAAGCCTCAGCCAAGCCGGCGATATTCTGCCAGTGCTTCTGTGAATGTTCAAGAAGATGGGCCTGATAAGCCTTCACCTTTAACTGGCCAAGATGACAGATTGTTCAGCATGTATGCTCAGACAGTTCATACCCTTGAGCCAAATGGAACTACAGAACCATCACTGGCCGCAAATGATAGCATCAACGAAGGTGCAGGAACAACTCTGCCATGCAAGAATCAGGATGAGGTTGATGACGATGACATATTCTCGAAGCGGAGGAAAATGGAACTTGGTGGTTTCGATGTCTGCCCAATGGTTAAACCAATCAGGGAACCACGTGTTGTGGTTCAAACTCTAAGTGAGGTAGATATACTGGATGACGGGTATCGCTGGCGCAAATATGGCCAGAAGGTAGTGAGAGGAAATCCCAACCCAAGGAGTTATTACAAATGCACAAATGTTGGATGCCCTGTTAGAAAACATGTTGAAAGAGCATCCCATGACCCGAAAGCTGTTATAACTACGTATGAGGGGAAACATAATCACGATGTTCCCACTGCAAAAACTAGTAGCCATGATGTCGGGGGTCCATCGACAATTGCACCATCGAGGTATAGACTCGAGGAGAGCGACACCATAAGCCTTGATCTTGGCGTTGGCATTGGCACTGGCACGGGTGGTGAGAATAGATCAAATGATTACAGGCAGGCATTGCATTCACAACTTGTTGAAAACCAAACTCCAAATGGCAATTTCAACTTTGAAGTAGTTCAAGAGAACTCAGCCCCGACCTATTTCGGTGTGATCAATAGAGGTATAAATCAACATGGATCAAGAGAGAGTTTGAGTGAAAGCCACAATAGGGAGATTGCTCCGCTAAATCATTCGTCTCACCCATATCCGACGAGCATTGGGAGAATACTAACAGGGCCTTAA | 1728 | 45.95 | MDPTDSDLADPSHASSSAGAKYKLMSPAKLPISRSPCITIPPGLSPTSFLDSPVLLTNLKVEPSPTTGSFTKLPMAHDSSSSAIYPVTTMAFSNTNASDEGRSNYFEFKPYVGPNMVPADLSHRKGEQSSEVQVQGQPQPFTAPPMTKIEINVVSNDLSRSTQMDTHPIGSGASAPEADGDDINHSLNTNSRVQAPQSDPKGSCIPVVSDRLSDDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQIADIIYKGTHDHPKPQPSRRYSASASVNVQEDGPDKPSPLTGQDDRLFSMYAQTVHTLEPNGTTEPSLAANDSINEGAGTTLPCKNQDEVDDDDIFSKRRKMELGGFDVCPMVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNVGCPVRKHVERASHDPKAVITTYEGKHNHDVPTAKTSSHDVGGPSTIAPSRYRLEESDTISLDLGVGIGTGTGGENRSNDYRQALHSQLVENQTPNGNFNFEVVQENSAPTYFGVINRGINQHGSRESLSESHNREIAPLNHSSHPYPTSIGRILTGP | 575 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 5399467 | 5405145 | - | CePI673135_10g004540.1 | Cec10g0454 | 213369 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec10g0454 | 575 | MobiDBLite | consensus disorder prediction | 128 | 142 | - | - | |
Cec10g0454 | 575 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 98 | 457 | IPR044810 | GO:0003700(InterPro) | |
Cec10g0454 | 575 | MobiDBLite | consensus disorder prediction | 125 | 144 | - | - | |
Cec10g0454 | 575 | Pfam | WRKY DNA -binding domain | 214 | 270 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cec10g0454 | 575 | Pfam | WRKY DNA -binding domain | 390 | 447 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cec10g0454 | 575 | ProSiteProfiles | WRKY domain profile. | 384 | 449 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cec10g0454 | 575 | MobiDBLite | consensus disorder prediction | 551 | 567 | - | - | |
Cec10g0454 | 575 | MobiDBLite | consensus disorder prediction | 161 | 209 | - | - | |
Cec10g0454 | 575 | FunFam | WRKY transcription factor | 203 | 273 | - | - | |
Cec10g0454 | 575 | SUPERFAMILY | WRKY DNA-binding domain | 381 | 449 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cec10g0454 | 575 | MobiDBLite | consensus disorder prediction | 183 | 198 | - | - | |
Cec10g0454 | 575 | MobiDBLite | consensus disorder prediction | 445 | 467 | - | - | |
Cec10g0454 | 575 | Gene3D | WRKY domain | 206 | 273 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cec10g0454 | 575 | MobiDBLite | consensus disorder prediction | 264 | 301 | - | - | |
Cec10g0454 | 575 | ProSiteProfiles | WRKY domain profile. | 208 | 272 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cec10g0454 | 575 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Cec10g0454 | 575 | FunFam | WRKY transcription factor 33 | 376 | 442 | - | - | |
Cec10g0454 | 575 | SUPERFAMILY | WRKY DNA-binding domain | 210 | 272 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cec10g0454 | 575 | MobiDBLite | consensus disorder prediction | 541 | 575 | - | - | |
Cec10g0454 | 575 | Gene3D | WRKY domain | 376 | 442 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cec10g0454 | 575 | SMART | WRKY_cls | 213 | 271 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cec10g0454 | 575 | SMART | WRKY_cls | 389 | 448 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec02g0284 | Cec-Chr2:2626157 | Cec10g0454 | Cec-Chr10:5399467 | 1.80E-66 | dispersed | |
Cec10g0393 | Cec-Chr10:4729290 | Cec10g0454 | Cec-Chr10:5399467 | 5.80E-81 | dispersed | |
Cec10g0454 | Cec-Chr10:5399467 | Cec11g0476 | Cec-Chr11:5119750 | 4.80E-72 | dispersed | |
Cec10g0454 | Cec-Chr10:5399467 | Cec05g2623 | Cec-Chr5:37015293 | 5.90E-70 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
30344 | PF03106 | WRKY | 3.30E-25 | CL0274 | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec10g0454 | - | - | - | 0.0 |