Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g0455 ATGATGCCTAGTATGATGACAGAGTCATCAGAGAAGGAGACAGAGGCATTTGTAGAGGTGGATCCGACGGGTCGATATGGGCGGTACGGGGAGCTTCTGGGGACAGGGGCGGTGAAGAAAGTGTACAGAGCATTTGATCAAGAAGAAGGAATAGAGGTAGCTTGGAACCAAGTGAAACTAAGGAGTTTTTCAAATGATCCATCCATGATAGATAGGTTGTATTCAGAGGTGAGATTGTTAAGAACCTTAAAGAACAACAACATAATTGCCTTGTATGATGTTTGGCTTGACAAACTTCATGGAACCTTAAATTTCATTACTGAGGTTTGTACAAGTGGAAACCTTAGAGAGTACAGGAAGAAGCATAGGCAAGTCTCTTTGAAAGCTTTGAAGAAATGGTCCAAACAAATTCTTAAGGGTTTGCATTATTTGCATACTCATGACCCTTGTGTTATTCATAGAGATCTCAACTGTAGCAACCTCTTTGTCAATGGCAATGTTGGCCAGGTAAAGATTGGTGACTTAGGTTTAGCAGCAACCGTGAGAAAGAATCACTCAGCTCATTCAGTGCTTGGGACACCAGAATTCATGGCACCTGAGCTATATGAAGAGCATTACACCGAGCTTGTGGACATATATTCATTTGGAATGTGTTTGCTTGAATTAGTCACTTTGGAAATTCCCTATAGTGAATGTGACAATGTTGCCAAAATCTATAAAAAAGTCTCCTCAGGCATCAAGCCTCAAGCCCTTGACAAGGTCAAGGACCCTGAAGTCAAGGCTTTCATCGAGAATTGCCTTGCCGAATCCCGAGCTCGGCCCTCAGCTGCTGACCTCCTCCGCCACCCCTTCTTCGGAGAAATTGATGATGACGAAAACGACGACGACAATGATCATTAA 900 43.11 MMPSMMTESSEKETEAFVEVDPTGRYGRYGELLGTGAVKKVYRAFDQEEGIEVAWNQVKLRSFSNDPSMIDRLYSEVRLLRTLKNNNIIALYDVWLDKLHGTLNFITEVCTSGNLREYRKKHRQVSLKALKKWSKQILKGLHYLHTHDPCVIHRDLNCSNLFVNGNVGQVKIGDLGLAATVRKNHSAHSVLGTPEFMAPELYEEHYTELVDIYSFGMCLLELVTLEIPYSECDNVAKIYKKVSSGIKPQALDKVKDPEVKAFIENCLAESRARPSAADLLRHPFFGEIDDDENDDDNDH 299
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5435455 5437744 + CePI673135_10g004550.1 Cec10g0455 213370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g0455 299 FunFam Probable serine/threonine-protein kinase WNK1 11 108 - -
Cec10g0455 299 Gene3D Phosphorylase Kinase; domain 1 10 108 - -
Cec10g0455 299 SUPERFAMILY Protein kinase-like (PK-like) 29 290 IPR011009 -
Cec10g0455 299 PIRSF TyrPK_CSF1-R 26 129 - -
Cec10g0455 299 PIRSF TyrPK_CSF1-R 119 282 - -
Cec10g0455 299 CDD STKc_WNK 25 285 - -
Cec10g0455 299 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 9 286 IPR050588 GO:0004674(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0035556(PANTHER)
Cec10g0455 299 FunFam probable serine/threonine-protein kinase WNK9 110 291 - -
Cec10g0455 299 Gene3D Transferase(Phosphotransferase) domain 1 110 290 - -
Cec10g0455 299 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec10g0455 299 Pfam Protein kinase domain 30 285 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0973 Cec-Chr2:13959840 Cec10g0455 Cec-Chr10:5435455 1.20E-125 dispersed
Cec06g0999 Cec-Chr6:14618325 Cec10g0455 Cec-Chr10:5435455 6.80E-101 dispersed
Cec09g1076 Cec-Chr9:10487751 Cec10g0455 Cec-Chr10:5435455 1.80E-11 dispersed
Cec10g0455 Cec-Chr10:5435455 Cec05g1963 Cec-Chr5:31680992 4.80E-23 dispersed
Cec10g0455 Cec-Chr10:5435455 Cec02g1719 Cec-Chr2:34930948 3.40E-101 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72301 PF00069 Pkinase 2.10E-51 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g0455 K08867 - csv:101221172 553.903