Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g0460 ATGGCTCTACAGAGTTTTGGTTCATTAATCAAAGAGCCTCGTTTTGTAGTTAGAAAGTTTCTTGCTAGACCTCAACATGAAGGCCTTGGCGCTGTTGTAAGAAGAAGCATCGGCAGGTTTGAGCTCAAATACTTTGATCCATTCCTTGTTCTCGATGAGTTTTCTGTTACTGCACCTGCTGGGTTTCCTGATCATCCACATAGAGGATTTGAAACTGTCACTTACATGTTAGAGGGAGCAATGACACATGAAGATTTCAAAGGACATAAAGGAAGAATTGGAGCTGGTGACTTGCAATGGATGACTGCTGGCAAAGGCATTGTTCACTCTGAAATGCCTGCATCCCATGGCACCCAACATGGCTTACAACTTTGGATCAATCTTTCCTCCAAACACAAAATGATTGAGCCAAGGTATCAAGAAATACACAACGAGGACGTAGTAGAAGTTACAAGAGAAGGAGTAAAAGTGAGAGTGATAGCAGGGGAAGCCTTGGGAGCTAAATCCCCAATCTACACCAAAACTCCAACCATGTACTTGGACTTCACTCTCGGCCCGGGATCTCGCATCGAGCAGCCGATCCCGGTGGGGTGGAATGCGTTCGTCTACGTACTAGAAGGTGAGGGCGGAGTGTTCGGGAGCATGAAATCGATGCCGATTACGCCACATCACCTTCTTTTGTTGGGGAATGGGGATGGGTTGGAGGCTTGGAACAAGTCCTCCTCCAAAGCCCTAAGGTTCATATTGGTTGGGGGTCAGCCATTGAATGAGAGCGTTGTGCAGTTGGGGCCATTTGTGATGAACACTCAAGAAGAAATTGACCAAACCATAGAGGATTTTGAGAATTGTACAAATGGATTTGAGAGAGCAAGGCATTGGAGTTCACAACCTTAA 894 45.86 MALQSFGSLIKEPRFVVRKFLARPQHEGLGAVVRRSIGRFELKYFDPFLVLDEFSVTAPAGFPDHPHRGFETVTYMLEGAMTHEDFKGHKGRIGAGDLQWMTAGKGIVHSEMPASHGTQHGLQLWINLSSKHKMIEPRYQEIHNEDVVEVTREGVKVRVIAGEALGAKSPIYTKTPTMYLDFTLGPGSRIEQPIPVGWNAFVYVLEGEGGVFGSMKSMPITPHHLLLLGNGDGLEAWNKSSSKALRFILVGGQPLNESVVQLGPFVMNTQEEIDQTIEDFENCTNGFERARHWSSQP 297
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5505570 5508171 - CePI673135_10g004600.1 Cec10g0460 213375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g0460 297 Pfam Pirin 33 126 IPR003829 -
Cec10g0460 297 FunFam pirin 27 164 - -
Cec10g0460 297 Pfam Pirin C-terminal cupin domain 179 286 IPR008778 -
Cec10g0460 297 CDD cupin_pirin_C 176 254 - -
Cec10g0460 297 PIRSF Pirin 12 294 IPR012093 -
Cec10g0460 297 Gene3D Jelly Rolls 148 255 IPR014710 -
Cec10g0460 297 PANTHER PIRIN-RELATED 11 296 IPR012093 -
Cec10g0460 297 SUPERFAMILY RmlC-like cupins 14 295 IPR011051 -
Cec10g0460 297 CDD cupin_pirin_N 31 128 - -
Cec10g0460 297 Gene3D Jelly Rolls 27 281 IPR014710 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec09g2196 Cec-Chr9:38898611 Cec10g0460 Cec-Chr10:5505570 7.50E-133 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g0460 K06911 - csv:101204082 536.184