Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g0467 ATGATGGAATTTGACTCCCTCTCCGGCCGTGGTCAATACGACGTTGATCCAATTCAACTCAAATTGGACTTCAATTCCTCCTCCCATAGGTTGATGATGGCACCTTCTGATATATGGATAAAGGAATATAATGAAGCCTCTAAGCTTGGTGATGATATCAATGGCATGATTTCTGAAAGGAGTTCCTTTCCTGCAACTGGACCAGATTCCCAACGTCACGCCTCTGCCATTCGGAGGAAGATCACAATTTTGGGGACTAAAGTTGATGGCTTAGAGTCCCTTTGGTTGAAGCTTCCTGCAAAGCAGCCCCTGTCTGAAAAGGAGATAAATCGACGTAAAGACATGCTTGCTCAGATGAGATCAAAAGTAAAGCAGATGGCCTCAACGTTGAACATGTCAAACTTTGCTAACCGAGACAGTTTGCTTGGCCCAGATATGAAATCGGCGGATGTAATGAGCAAGACTGCTGGACTAGACAATCAAGGACTTGTTGGTTTTCAAAGACAAATCATGAAAGAGCAAGATGAAGGTCTTGAAAAACTGGAGGAGACTATTATAAGTACAAAACATATTGCTTTAGCAGTTAATGAAGAACTCGATCTTCACACTCGCCTAATTGATGACTTGGACCAACATGTTGATGTTACAGACTCTCGATTAGCGAGGGTGCAGAAGAGATTGGCAATATTGAACAAGCGAGCAAAGGGGAGCTGCTCTTGCTTTGGGATGCTTCTGTCTGTGGGAATGAGAATGGAAGACCATGAGACCCACCTGATTACGTTGGTAAGTGTATTTTTACAAAATTGCCATTTCTCTGTCCTCTGGTCCTTGTCCTTGGGTACTATTCTATTCTCCTTCACCATCGCACAGTCTGTGCTCAAGGTATCTCCAGGTACGCAATCCCCTTTCTCTGACCACATGGTTTAG 927 43.8 MMEFDSLSGRGQYDVDPIQLKLDFNSSSHRLMMAPSDIWIKEYNEASKLGDDINGMISERSSFPATGPDSQRHASAIRRKITILGTKVDGLESLWLKLPAKQPLSEKEINRRKDMLAQMRSKVKQMASTLNMSNFANRDSLLGPDMKSADVMSKTAGLDNQGLVGFQRQIMKEQDEGLEKLEETIISTKHIALAVNEELDLHTRLIDDLDQHVDVTDSRLARVQKRLAILNKRAKGSCSCFGMLLSVGMRMEDHETHLITLVSVFLQNCHFSVLWSLSLGTILFSFTIAQSVLKVSPGTQSPFSDHMV 308
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5606053 5611371 + CePI673135_10g004670.1 Cec10g0467 213382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g0467 308 PANTHER SYNTAXIN 40 240 IPR045242 GO:0000149(PANTHER)|GO:0005484(PANTHER)|GO:0006886(PANTHER)|GO:0006906(PANTHER)|GO:0012505(PANTHER)|GO:0016021(PANTHER)|GO:0031201(PANTHER)|GO:0048278(PANTHER)
Cec10g0467 308 SMART tSNARE_6 163 230 IPR000727 -
Cec10g0467 308 Gene3D - 170 232 - -
Cec10g0467 308 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 168 230 IPR000727 -
Cec10g0467 308 FunFam syntaxin-51 isoform X2 170 232 - -
Cec10g0467 308 CDD SNARE_Qc 171 228 - -
Cec10g0467 308 SUPERFAMILY SNARE fusion complex 159 230 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec06g0054 Cec-Chr6:507353 Cec10g0467 Cec-Chr10:5606053 5.80E-06 dispersed
Cec09g1092 Cec-Chr9:10713118 Cec10g0467 Cec-Chr10:5606053 1.30E-80 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g0467 K08503 - csv:101223140 396.356