Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec10g0467 | ATGATGGAATTTGACTCCCTCTCCGGCCGTGGTCAATACGACGTTGATCCAATTCAACTCAAATTGGACTTCAATTCCTCCTCCCATAGGTTGATGATGGCACCTTCTGATATATGGATAAAGGAATATAATGAAGCCTCTAAGCTTGGTGATGATATCAATGGCATGATTTCTGAAAGGAGTTCCTTTCCTGCAACTGGACCAGATTCCCAACGTCACGCCTCTGCCATTCGGAGGAAGATCACAATTTTGGGGACTAAAGTTGATGGCTTAGAGTCCCTTTGGTTGAAGCTTCCTGCAAAGCAGCCCCTGTCTGAAAAGGAGATAAATCGACGTAAAGACATGCTTGCTCAGATGAGATCAAAAGTAAAGCAGATGGCCTCAACGTTGAACATGTCAAACTTTGCTAACCGAGACAGTTTGCTTGGCCCAGATATGAAATCGGCGGATGTAATGAGCAAGACTGCTGGACTAGACAATCAAGGACTTGTTGGTTTTCAAAGACAAATCATGAAAGAGCAAGATGAAGGTCTTGAAAAACTGGAGGAGACTATTATAAGTACAAAACATATTGCTTTAGCAGTTAATGAAGAACTCGATCTTCACACTCGCCTAATTGATGACTTGGACCAACATGTTGATGTTACAGACTCTCGATTAGCGAGGGTGCAGAAGAGATTGGCAATATTGAACAAGCGAGCAAAGGGGAGCTGCTCTTGCTTTGGGATGCTTCTGTCTGTGGGAATGAGAATGGAAGACCATGAGACCCACCTGATTACGTTGGTAAGTGTATTTTTACAAAATTGCCATTTCTCTGTCCTCTGGTCCTTGTCCTTGGGTACTATTCTATTCTCCTTCACCATCGCACAGTCTGTGCTCAAGGTATCTCCAGGTACGCAATCCCCTTTCTCTGACCACATGGTTTAG | 927 | 43.8 | MMEFDSLSGRGQYDVDPIQLKLDFNSSSHRLMMAPSDIWIKEYNEASKLGDDINGMISERSSFPATGPDSQRHASAIRRKITILGTKVDGLESLWLKLPAKQPLSEKEINRRKDMLAQMRSKVKQMASTLNMSNFANRDSLLGPDMKSADVMSKTAGLDNQGLVGFQRQIMKEQDEGLEKLEETIISTKHIALAVNEELDLHTRLIDDLDQHVDVTDSRLARVQKRLAILNKRAKGSCSCFGMLLSVGMRMEDHETHLITLVSVFLQNCHFSVLWSLSLGTILFSFTIAQSVLKVSPGTQSPFSDHMV | 308 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 5606053 | 5611371 | + | CePI673135_10g004670.1 | Cec10g0467 | 213382 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec10g0467 | 308 | PANTHER | SYNTAXIN | 40 | 240 | IPR045242 | GO:0000149(PANTHER)|GO:0005484(PANTHER)|GO:0006886(PANTHER)|GO:0006906(PANTHER)|GO:0012505(PANTHER)|GO:0016021(PANTHER)|GO:0031201(PANTHER)|GO:0048278(PANTHER) | |
Cec10g0467 | 308 | SMART | tSNARE_6 | 163 | 230 | IPR000727 | - | |
Cec10g0467 | 308 | Gene3D | - | 170 | 232 | - | - | |
Cec10g0467 | 308 | ProSiteProfiles | t-SNARE coiled-coil homology domain profile. | 168 | 230 | IPR000727 | - | |
Cec10g0467 | 308 | FunFam | syntaxin-51 isoform X2 | 170 | 232 | - | - | |
Cec10g0467 | 308 | CDD | SNARE_Qc | 171 | 228 | - | - | |
Cec10g0467 | 308 | SUPERFAMILY | SNARE fusion complex | 159 | 230 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec06g0054 | Cec-Chr6:507353 | Cec10g0467 | Cec-Chr10:5606053 | 5.80E-06 | dispersed | |
Cec09g1092 | Cec-Chr9:10713118 | Cec10g0467 | Cec-Chr10:5606053 | 1.30E-80 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec10g0467 | K08503 | - | csv:101223140 | 396.356 |