Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec10g0491 | ATGAGGAGAGGGAGAGGGGCGGCGGTGCCGGTACCGGCGGCGCGTGAACCACCTACCACCGGATCGGAACGGAGATACAGAGGAGTTCGTAAAAGGCCATGGGGAAGATTCGCGGCGGAGATCAGAGACCCTTGGAAGAAGACAAGAGTTTGGTTAGGGACCTTCGATTCCGCCGAAGACGCCGCCCGTGCTTACGATAACGCCGCCATAACCCTCCGAGGCCCTAAAGCTAAAACCAATTTCCCTCTTCCTAATCCCACTTCGTTTTTCGATTACCCTCCTTTCCCTCCTCATCCCGTCAACGCTCCAGATCCCTTCCCCGATTCCCGATTTCAGATTAACCCTCATAGACCTACTTCCAGCAGTTTGAGCTCCACCGTCGAATCCTTCAGCGGTCCTCGCCCTCCCTCCGCCGCCGCTACTACGACCACTTCCCCCTCCCGCCGTTACCCACGTACACCGCCTCTCCTCCCTGAAGATTGCCATAGCGATTGTGATTCTTCCTCTTCCGTCATCGACGATGGCGACGACATCGCTTCCTCCTCCATCCTTCCTCGGAAACCACCTCTGCCTTTCGATCTCAACATTCCACCTTCCGATCTTCTTGATTTTACCGCCGATGATCTTCGATGTACCGCTTTGTGCCTCTGA | 651 | 56.07 | MRRGRGAAVPVPAAREPPTTGSERRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSAEDAARAYDNAAITLRGPKAKTNFPLPNPTSFFDYPPFPPHPVNAPDPFPDSRFQINPHRPTSSSLSSTVESFSGPRPPSAAATTTTSPSRRYPRTPPLLPEDCHSDCDSSSSVIDDGDDIASSSILPRKPPLPFDLNIPPSDLLDFTADDLRCTALCL | 216 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 5912195 | 5912845 | - | CePI673135_10g004910.1 | Cec10g0491 | 213406 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec10g0491 | 216 | Gene3D | AP2/ERF domain | 24 | 83 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec10g0491 | 216 | SMART | rav1_2 | 25 | 88 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec10g0491 | 216 | FunFam | Ethylene-responsive transcription factor 2 | 24 | 83 | - | - | |
Cec10g0491 | 216 | SUPERFAMILY | DNA-binding domain | 25 | 83 | IPR016177 | GO:0003677(InterPro) | |
Cec10g0491 | 216 | ProSiteProfiles | AP2/ERF domain profile. | 25 | 82 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec10g0491 | 216 | PANTHER | AP2 DOMAIN CLASS TRANSCRIPTION FACTOR | 14 | 174 | - | - | |
Cec10g0491 | 216 | MobiDBLite | consensus disorder prediction | 94 | 169 | - | - | |
Cec10g0491 | 216 | PRINTS | Ethylene responsive element binding protein signature | 48 | 64 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec10g0491 | 216 | PRINTS | Ethylene responsive element binding protein signature | 26 | 37 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec10g0491 | 216 | MobiDBLite | consensus disorder prediction | 1 | 28 | - | - | |
Cec10g0491 | 216 | CDD | AP2 | 25 | 82 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec10g0491 | 216 | MobiDBLite | consensus disorder prediction | 113 | 150 | - | - | |
Cec10g0491 | 216 | Pfam | AP2 domain | 25 | 74 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec08g0393 | Cec-Chr8:10961266 | Cec10g0491 | Cec-Chr10:5912195 | 1.30E-18 | dispersed | |
Cec09g0317 | Cec-Chr9:2635823 | Cec10g0491 | Cec-Chr10:5912195 | 3.30E-19 | dispersed | |
Cec09g2188 | Cec-Chr9:38802575 | Cec10g0491 | Cec-Chr10:5912195 | 6.00E-52 | dispersed | |
Cec10g0491 | Cec-Chr10:5912195 | Cec11g1829 | Cec-Chr11:32467084 | 5.90E-23 | dispersed | |
Cec10g0491 | Cec-Chr10:5912195 | Cec02g1900 | Cec-Chr2:36846166 | 5.20E-51 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
30346 | PF00847 | AP2 | 5.00E-14 | CL0081 | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec10g0491 | K09286 | - | csv:101219993 | 295.049 |