Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g0514 ATGATGAATAAGGATTCCCTTTTCCACATCGAGAATATCCTTCTCATTCTTCTCAAGCTTTCTATATTCGCATTCTGCTTCGACTTCAGCTTCAGCTTCTTGGGTGCCTTCAGATACCACCAAGCAAATTACATGGTTGATCTAGACATCCAGATTCCAAGCGCTTTCGATCCCTTTGCTGACGCCAAAGACTCGGATGCCCCCGGAACCAAAGAATACATCCATATAAGGGTCCAACAGAGGAATGGAAAGAAGTGTCTAACGACAGTTCAAGGGCTTAAGAAAGAGTTCAGCTATGATAAGATCCTTAAGGACCTGAAGAAGGACTTCTGTTGCAACGGGAATGTTGTGCAGGATAAAGAGCTGGGGAAGATAATCCAACTTCAAGGCGATCAGCGCAAGAACGTCTCTCAGTTCCTTGTTCAGGCTGGCCTCGTCAAGAAGGATCAAATCAAGATACATGGTTTTTGA 471 44.37 MMNKDSLFHIENILLILLKLSIFAFCFDFSFSFLGAFRYHQANYMVDLDIQIPSAFDPFADAKDSDAPGTKEYIHIRVQQRNGKKCLTTVQGLKKEFSYDKILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 156
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 6199372 6201233 - CePI673135_10g005140.1 Cec10g0514 213429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g0514 156 Pfam Translation initiation factor SUI1 71 145 IPR001950 GO:0003743(InterPro)|GO:0006413(InterPro)
Cec10g0514 156 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 45 156 - GO:0003723(PANTHER)
Cec10g0514 156 SUPERFAMILY eIF1-like 43 156 IPR036877 GO:0003743(InterPro)|GO:0006413(InterPro)
Cec10g0514 156 NCBIfam translation initiation factor SUI1 49 156 IPR005874 GO:0003743(InterPro)
Cec10g0514 156 CDD eIF1_SUI1 72 155 IPR005874 GO:0003743(InterPro)
Cec10g0514 156 Gene3D - 35 156 - -
Cec10g0514 156 FunFam Eukaryotic translation initiation factor SUI1 46 156 - -
Cec10g0514 156 ProSiteProfiles Translation initiation factor SUI1 family profile. 74 144 IPR001950 GO:0003743(InterPro)|GO:0006413(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0190 Cec-Chr2:1790671 Cec10g0514 Cec-Chr10:6199372 2.50E-40 dispersed
Cec09g1068 Cec-Chr9:10394552 Cec10g0514 Cec-Chr10:6199372 9.60E-53 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g0514 K03113 - csv:101214921 228.409