Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g0529 ATGGATGAACTTAAAATGTCTTCGATTTCCTACGAATCCGATCGGCCGGTAGTTTCTGACCCAAAATGCGAAGCCGTTATTAAATCTGATGGGAATCGGAATGAGAACAAGAATGTGAATTTCTTAAGATTCATGGAGGAACTTGATGCTCAAATTGCTCGGTTTCAGCATAGGCGGTTTGGTGTTGCGCAACTGCCACCAGAAATTGGGAAGCTCTGGACAGAGACGCGTGAGAAACGCCTAATTTGGCTCAACAAGCTTTCTGAAAATGGCGGAAATAGCCACTCACACCATCCTTCTCAAATTAGCAAATTTGACTCAGTCTCTCTCGATTCCAAACTTGGAGGGTTTCCTACTGCAACAAAGAAGAAAAACAAGCTTCATGAGGAGAAAGTCAATAGGAAGTCTTTGAAAAAGAGCATTAAAGAGTACCATGACACAAAAACTTTAGCCTCATTTGCCAACATTTCCTTTAAATCTGATAGCAGTCGGCGAAGGTACATAACTGAGGAGATAAAAAAGTTAGGAAAAGGAAACATCTCTGCTCAAATTTTTACATTTTGTGAGCTATCTACGGCTACAAATAACTTCAACCACGAAAATCTGTTGGGGGAAGGTGGTTTTGGAAGGGTTTACAAAGGCGTCATTGAAAGCACACAACAAATAACGGCTGTGAAGCAACTTGACCGAAATGGTTTTCAAGGAAACAGAGAATTCCTTGTAGAGGTTTTGATGTTGAGCCTTCTTCACCATCCTAATCTTGTGAATTTGGTTGGGTATTGTGCTGATGGGGATCAGAGAATTTTGGTTTATGAGTACATGGCTAAAGGTTCCTTGGAGGATCATCTTCTTGATATAGCATCAGATAAGCCACCTCTGGACTGGAAGACAAGGATGAAAATTGCCGAAGGAGCAGCAAAAGGACTTGAATACTTGCACGAAACTGCTAATCCTCCCGTTATATACCGTGATTTCAAAGCTTCAAACATATTGTTGGACGAGGAATTCAATCCAAAGCTCTCTGATTTTGGTCTTGCAAAGTTAGGTCCTACTGGGGACAAATCTCATGTTTCCACTAGGGTGATGGGAACCTATGGTTACTGTGCTCCTGAATATGCACTTACAGGACAATTGACAACGAAATCAGATGTCTATAGTTTCGGTGTCGTGTTTCTGGAGATTATAACTGGAAGAAGGGTTATAGACAATGCAAGACCAACAGCAGAACAAAATTTAATTACTTGGGCACAACCACTTTTCAAAGACAGAAGGAAATTTACCCTAATGGCAGATCCAAAGCTAGAAGGAAATTATCCAGTGAAGGCTCTATATCAAGCTTTGGCAGTGGCAGCCATGTGTTTACAAGAGGAAGCGGGTACTCGACCATTGATCAGCGACGTGGTTACGGCCCTTGAATATTTAGCTGCAAACAAGGATGTCGATGCAGACGTAGATGATGAATCAGATTCAGGATCGGTATTGGGATCGGGATCAGGTTCAGCTTCTCCTGATAGAAGTAGTAACAATGGAGATAAAAATGTTGATGTTGAGGGTGATGGGAGGACATGCAAAGATCTTCCCAATTTGTATAGAAGTGTGGCCACATCTATGAGGAAAATGTGTCAGCGAGGTCCCCCGAAAAATGTCTGCCTCTTCTTGCTCGGTCTAGATGATTCTGCACTGTGTACCCTGCTCGTAAGAGTGGGATATGTCCTCCTTCGATGTAGGCTCAAGTACATGTGGATTGGGTATGCCAAAGTCTTTGAGATTTATGTCCACATTATCCTCATGATCTTTGTTGTCTCTAAGCTATGTCAGTAG 1821 42.12 MDELKMSSISYESDRPVVSDPKCEAVIKSDGNRNENKNVNFLRFMEELDAQIARFQHRRFGVAQLPPEIGKLWTETREKRLIWLNKLSENGGNSHSHHPSQISKFDSVSLDSKLGGFPTATKKKNKLHEEKVNRKSLKKSIKEYHDTKTLASFANISFKSDSSRRRYITEEIKKLGKGNISAQIFTFCELSTATNNFNHENLLGEGGFGRVYKGVIESTQQITAVKQLDRNGFQGNREFLVEVLMLSLLHHPNLVNLVGYCADGDQRILVYEYMAKGSLEDHLLDIASDKPPLDWKTRMKIAEGAAKGLEYLHETANPPVIYRDFKASNILLDEEFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQLTTKSDVYSFGVVFLEIITGRRVIDNARPTAEQNLITWAQPLFKDRRKFTLMADPKLEGNYPVKALYQALAVAAMCLQEEAGTRPLISDVVTALEYLAANKDVDADVDDESDSGSVLGSGSGSASPDRSSNNGDKNVDVEGDGRTCKDLPNLYRSVATSMRKMCQRGPPKNVCLFLLGLDDSALCTLLVRVGYVLLRCRLKYMWIGYAKVFEIYVHIILMIFVVSKLCQ 606
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 6364338 6371776 + CePI673135_10g005290.1 Cec10g0529 213444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g0529 606 Gene3D Transferase(Phosphotransferase) domain 1 274 493 - -
Cec10g0529 606 ProSiteProfiles Protein kinase domain profile. 197 474 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec10g0529 606 MobiDBLite consensus disorder prediction 482 520 - -
Cec10g0529 606 FunFam Serine/threonine-protein kinase PBS1 274 489 - -
Cec10g0529 606 CDD STKc_IRAK 203 472 - -
Cec10g0529 606 MobiDBLite consensus disorder prediction 491 509 - -
Cec10g0529 606 ProSitePatterns Serine/Threonine protein kinases active-site signature. 320 332 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec10g0529 606 ProSitePatterns Protein kinases ATP-binding region signature. 203 226 IPR017441 GO:0005524(InterPro)
Cec10g0529 606 Pfam Protein kinase domain 198 467 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec10g0529 606 SUPERFAMILY Protein kinase-like (PK-like) 181 469 IPR011009 -
Cec10g0529 606 Gene3D Phosphorylase Kinase; domain 1 157 273 - -
Cec10g0529 606 FunFam Serine/threonine-protein kinase CDL1-like 168 273 - -
Cec10g0529 606 PANTHER OS07G0668900 PROTEIN 141 481 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec09g1058 Cec-Chr9:10293323 Cec10g0529 Cec-Chr10:6364338 4.90E-174 dispersed
Cec10g0529 Cec-Chr10:6364338 Cec10g2072 Cec-Chr10:35445360 1.70E-131 dispersed
Cec10g0529 Cec-Chr10:6364338 Cec05g0694 Cec-Chr5:5685097 4.80E-139 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72303 PF00069 Pkinase 1.70E-46 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g0529 - - - 0.0